Octopus bimaculoides (California two-spot octopus): 106872975
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Entry
106872975 CDS
T04127
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106872975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106872975
03012 Translation factors [BR:
obi03012
]
106872975
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106872975
Translation factors [BR:
obi03012
]
Eukaryotic type
Release factors
106872975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
106872975
NCBI-ProteinID:
XP_014775647
UniProt:
A0A0L8H562
LinkDB
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Position
2:167148752..167183762
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AA seq
442 aa
AA seq
DB search
MASNGVDGETNADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEF
GTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVIYCGTIVTDEGKEKKVNIDFEP
FRPINTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLSGNTREVLHKFTVDL
PKKHGRGGQSALRFARLRMEKRHNYVRKVAEVAVQLFITNDKPNISGLVLAGSADFKTEL
SQSDMFDPRLQGKIIKIVDVSYGGENGFNQAIELASDALANVKFIQEKKLIGRYFDEISQ
DTGKYCFGVDDTLKALEMGAVDILIVWENLDITRYILKNHSTDEEKILHLRPEQEKDKTH
FMEKETGVELELVDQMPLLEWFANNYKNFGATLEIITDKSQEGAQFVKGFGGIGAILRYQ
VDFNILEVHEDGYDEDFDLEDY
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaacggtgtggatggtgaaacgaacgccgatcgtaacgtcgaaatatggaag
ataaagaagctgatcaaaagcctggaggcggctaggggaaatggcacaagcatgatttcc
ctgattattcctcccaaggatcaaatttctcgagttgctaagatgttagccgatgagttt
ggcacagcttctaacataaagagtcgagtaaaccggctatctgtgctgggtgccattaca
tcagtacaacagagactaaagttatataacaaagtgcctcctaatggtttagtcatctat
tgtggaaccattgttacagacgaaggaaaagagaaaaaagttaatattgattttgaaccg
ttccgacctataaatacttcgctctacctctgtgacaacaaatttcacacggaagcttta
acagcacttttggcagatgataataagtttggttttattgtgatggatggtaacggagcc
ttatttggaaccttatctggaaatacacgagaagtacttcataaatttacagttgattta
ccaaagaaacacggtcgtggtggacaatcagcattgcggttcgctcgattacggatggag
aaacgtcacaactatgtacgaaaagttgctgaggtggcagttcagttattcattaccaat
gacaagcccaatatttcaggacttgtgttggctggttctgctgattttaaaacagaactt
agtcaatcagatatgtttgatccaagattacaaggcaaaattatcaagatagttgatgtt
tcctatggaggagagaatggttttaatcaagcaattgaactagcatcagatgctttagcg
aatgttaaatttattcaagaaaagaaattgataggcaggtattttgatgagatatctcag
gatacaggcaaatattgttttggtgttgatgacaccttaaaagctttagaaatgggtgct
gttgacattctgattgtctgggaaaatcttgatattacaagatatatcttgaagaaccat
tccacagatgaggagaaaatcttgcatttgaggccagagcaggaaaaagacaaaacacac
ttcatggaaaaagaaacgggagttgagttggaattagtggaccaaatgcctcttcttgaa
tggtttgcaaataattataaaaactttggtgccacattggaaataattacagacaagtcc
caggaaggtgcacaatttgtgaaaggttttggtggtattggagccattttgcggtaccaa
gtagacttcaatattttggaggtacacgaagatggttatgatgaagattttgatcttgaa
gattactga
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