Octopus bimaculoides (California two-spot octopus): 106873018
Help
Entry
106873018 CDS
T04127
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X2
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03013
Nucleocytoplasmic transport
obi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106873018
03015 mRNA surveillance pathway
106873018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106873018
Enzymes [BR:
obi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106873018
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106873018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
106873018
NCBI-ProteinID:
XP_014775702
LinkDB
All DBs
Position
25:complement(6680024..6702546)
Genome browser
AA seq
494 aa
AA seq
DB search
MSDWSAQVNEQEQGLAMRVSEMTLKKNENTSTLNQNSNSTPTAAPNQSSTTISSSTTVKP
AADNPEEDDVEATKEDASYLRKILRSKLVTTKTDLEVLRKDPRSPLYFVKTFNDLNLKPE
LLRGVYAMGFDAPSKIQETALPTLLANPPVNMIAQSQSGTGKTAAFVLTMLSRVDVNLKY
PQCLCLAPTYELAIQIGEVAIKMAKFMTDVKIGFAVRGTERDKIFTEQIVIGTPGTALDL
GWKFNAFDLQKISVFVLDEADVMIATQGHKDQSIRIQRHLGECQMLLFSATYDAEVMKFA
QDIIPNPVTIRLRREEESLDNIKQYYIECQSQDDKFKALSNIYGSISIGQAVVFCKTRKS
ASWLSEKMSRDGHAVGLLSGELPIHQRADIIRRFREGNEKVLITTNVAARGIDVAQVTMV
VNFDLPTLQDGKPDFETYLHRIGRTGRFGKDGIALNMVSRNTLNILHEIERHFARTILKL
DANDVDELEKISEN
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactggtcggcacaagtcaatgaacaggagcaggggttggctatgcgggtgagt
gagatgactctgaagaagaatgaaaacacatccacactgaaccagaattcaaacagcacc
ccaacagctgcccctaatcagagttctacaactatatcatcatccacaacagtgaagcct
gcagcggataatcctgaagaagatgatgttgaagccacaaaggaagatgcttcatatttg
cgtaaaattcttcgatctaaattggttaccacaaagacagatcttgaagtgttgaggaaa
gaccctcgttctccattgtattttgtcaagacattcaatgacttgaatctaaaacctgaa
cttcttcgaggtgtgtatgcaatgggatttgatgctccttcaaaaattcaagaaactgct
ttgccaactttactagccaacccccctgtaaacatgattgcacagtctcagagtggaact
ggaaaaacagctgcctttgttctcaccatgctaagtagagtagatgttaacctcaaatac
cctcagtgtctgtgtttagcacctacgtatgaattagccattcaaattggtgaagtagct
atcaaaatggcgaaatttatgaccgatgtgaaaattggatttgctgtccgaggaacggaa
cgagataaaatctttactgaacaaattgttattgggactcccggcactgcgttggatctg
ggttggaaatttaatgcatttgacttgcaaaagatttcagtttttgtattagacgaggct
gatgtaatgattgcaacacagggccataaagaccagtccatccggatacaacgacattta
ggagaatgccagatgttacttttctctgccacatacgatgccgaagtaatgaaatttgca
caagacatcatcccaaatcctgtcactatcaggctgcgtcgagaagaggagtcccttgac
aatatcaagcaatattacattgaatgtcagagccaggatgataaatttaaggccctttcc
aacatctacggttcaatatccattggacaagctgttgttttctgtaaaactagaaaatct
gcctcttggttatctgaaaagatgagtcgtgatggccacgctgttggcttgctaagcgga
gagttgccaatccatcagagagctgacatcatccgacgtttcagagaaggcaacgagaaa
gtcctgattacaacaaatgttgctgcccgaggaattgatgttgcccaagtaactatggtt
gttaactttgatctgccaactttgcaagatggtaaaccagattttgaaacttaccttcac
cgtattgggcgtactggaaggtttggcaaggatggcattgccctgaacatggtcagcaga
aataccttgaacatccttcatgaaatagagagacattttgcacgaacaatcttgaaactt
gatgctaatgacgtcgatgagttggagaagataagtgagaattga
DBGET
integrated database retrieval system
