Octopus bimaculoides (California two-spot octopus): 106873038
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Entry
106873038 CDS
T04127
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106873038
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
obi01007
]
106873038
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
obi03016
]
106873038
Enzymes [BR:
obi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
106873038
Amino acid related enzymes [BR:
obi01007
]
Aminoacyl-tRNA synthetase
Class II (U)
106873038
Transfer RNA biogenesis [BR:
obi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
106873038
Prokaryotic type
106873038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
tRNA-synt_2
tRNA_synthFbeta
PheRS_DBD2
tRNA-synt_2b
MarR_2
HTH_11
Motif
Other DBs
NCBI-GeneID:
106873038
NCBI-ProteinID:
XP_014775731
UniProt:
A0A0L8H4S8
LinkDB
All DBs
Position
23:27439983..27453403
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AA seq
492 aa
AA seq
DB search
MSDLQQSLLSYIDDKDSVDTLQLAQEWNVDHQKIVGVVKSLQALGEIIDVEQKSGKKLEL
TEEGQTICNSGSYEALIYNSIPEGGILQSEIMKNVPNAKIGFNKAMSAGWIRIDKTAEGG
PRIYKKVEKIEDKVQETLKQLHSLSLPDAQCKDFKKRKLIVESKVNSFIISKGPNFTLKI
SKPEIDLTPEMIASGSWKTFQFKPYNFNARGVLPPSGHLHPLLKVRAQYMKIFLEMGFSE
MATNNFVESSFWNFDALFQPQQHPARDAHDTFFISDPMNAHEFPEDYLERVKTVHSEGGY
GSQGYRYNWKIEEAQKNIMRTHTTAVSARMLYKLAQEKPFKPAKYFSIDRVFRNETLDAT
HLAEFHQIEGVVIDYNLTLGDLMGVIHKFFSKLGMTKLRFKPAYNPYTEPSMEIFSYHEG
LKKWVEIGNSGVFRPEMLLPMGLPENVSAIAWGLSLERPTMILYGIDNIRDLIGPKINLQ
MVYNNPICRVGI
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacttacaacagtcgttgctgtcttacatcgatgataaagattccgtggataca
ttacaactggctcaggaatggaatgtggaccatcagaaaatcgtcggagttgtcaaaagc
ttgcaggcccttggagagatcatcgatgtcgaacagaaaagcggcaagaaacttgaactt
actgaagaagggcaaacaatctgtaattctggaagttatgaagctttgatatataattca
attcctgaaggtggaattcttcagtcggaaattatgaaaaatgtgcccaatgctaaaatt
ggtttcaacaaagctatgtctgctggttggattagaatcgacaaaactgctgagggtgga
ccaagaatttacaagaaggtggagaaaattgaagacaaagtacaagaaacattgaagcag
ctacacagtctctcacttcctgatgcacaatgtaaagatttcaagaaaagaaagttgatt
gtagaaagcaaagtaaacagcttcattatatcaaaaggaccaaattttacactgaagatt
agtaaacctgaaattgacttaacacctgaaatgattgccagtggttcatggaaaaccttc
cagttcaaaccttacaatttcaatgccaggggtgtgttaccgccatctggacacctccac
cctctgttgaaagtcagggctcagtatatgaagattttcttggagatgggattttcagaa
atggctactaataactttgttgaaagtagtttctggaactttgatgcccttttccaacct
cagcaacatcctgctcgtgatgcccacgacactttcttcatatcagaccccatgaatgca
catgagttccctgaagactatttggaacgggtgaagaccgttcattcagaagggggttat
ggatctcaggggtatagatataactggaagatagaagaagctcagaaaaatataatgagg
acccacacaacagctgtgagtgccaggatgttgtataagttggcacaagagaaacctttc
aaaccagccaagtatttctctattgaccgtgtgttccgaaatgagacccttgatgcaacg
catcttgctgaattccatcagatagaaggagttgttattgattacaacctgactttaggg
gacctcatgggagtcattcataaattcttcagcaaactgggaatgaccaagttacgtttc
aaaccagcctataatccttacacagaacctagtatggaaatattcagttatcatgaagga
cttaaaaaatgggtagaaattggtaattcgggtgttttccgacctgaaatgttactaccg
atgggtttacctgagaatgtatcagctattgcatggggtttgtccttagaaagaccaacc
atgattctttatggtatagacaacatccgagatttgataggaccaaagattaacctacaa
atggtttacaataatcccatttgtcgtgttggaatttaa
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