Octopus bimaculoides (California two-spot octopus): 106873812
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Entry
106873812 CDS
T04127
Name
(RefSeq) CDK-activating kinase assembly factor MAT1 isoform X1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03022
Basal transcription factors
obi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106873812
09124 Replication and repair
03420 Nucleotide excision repair
106873812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obi03021
]
106873812
03400 DNA repair and recombination proteins [BR:
obi03400
]
106873812
Transcription machinery [BR:
obi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106873812
DNA repair and recombination proteins [BR:
obi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106873812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-C3HC4
zf-UDP
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
DUF3825
zf-P11
TRAF3_RING
zf-RING_4
LMBR1
DNA_ligase_ZBD
Motif
Other DBs
NCBI-GeneID:
106873812
NCBI-ProteinID:
XP_014776810
UniProt:
A0A0L8GZA1
LinkDB
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Position
6:76736997..76749925
Genome browser
AA seq
304 aa
AA seq
DB search
MDEQGCPRCKTTKYRNPSLKLLVNVCGHSLCENCVDLLFIRGSGACPECNTALRRNNFRV
QLFEDTTVEKEVDIRKRILKDFNQRESDFSSLNEYNDYLEMVETLIYNLSNNIDVESTKR
RIENYRKDNKEQIMKNRSKVSQDEEYLDMLLDEEIQNTEKRLKETFENEQKEKQLKRKNK
ELLLDELMSSDLPAQYIMASHKDLLEPTSGVPKAPTTQFSTGIKIGHHQDKYLPIPATES
APLYQYTPLLITMLGPKVPTVQELQLHGYLKNIRSATAMELAGGFHDTVGCKRALEDAFC
GLYF
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacaaggctgtccacgatgtaaaactacaaaatatcggaatccatccttaaaa
cttttggtcaatgtctgtggtcattctttgtgtgaaaactgtgttgatctgctatttata
cgaggttctggtgcatgtcctgagtgcaatacagcactccgaaggaacaactttagggtt
caactttttgaagataccacagttgaaaaagaagtagacatacgaaaaaggattttaaaa
gacttcaaccagagagagtctgacttctcttccttaaatgaatacaacgactatttagaa
atggtagaaactcttatttataacctgagcaacaatattgatgtagaatcaacaaaaagg
cgaattgaaaactatcgcaaagataacaaggaacaaataatgaagaatcgatcaaaagtg
agccaagatgaagaatacttagatatgttattggatgaagagattcagaataccgaaaaa
cgtttaaaagaaacttttgaaaatgagcaaaaagaaaaacagctcaaaagaaaaaacaag
gaactacttttggatgaacttatgtcatctgacctacctgcgcagtatataatggcatca
cataaagatttgttagaacctacctcaggtgtacctaaagctccgactacacagttctca
acaggaattaaaattggccatcaccaagataaatatctacctataccagcaacagaatct
gctccactttatcagtacacacctcttctgattacaatgcttggacccaaagtaccaaca
gtacaagaattgcagttacatgggtaccttaaaaatattcggtcagcaacagcaatggaa
cttgctggaggattccatgatactgttggctgcaagagagcattggaagatgcattttgt
ggactttatttctaa
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