Octopus bimaculoides (California two-spot octopus): 106874073
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Entry
106874073 CDS
T04127
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
obi01002
]
106874073
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obi04121
]
106874073
Enzymes [BR:
obi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106874073
Peptidases and inhibitors [BR:
obi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106874073
Ubiquitin system [BR:
obi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106874073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA
UBA_7
TPR_20
Caskin1-CID
Motif
Other DBs
NCBI-GeneID:
106874073
NCBI-ProteinID:
XP_052833469
LinkDB
All DBs
Position
28:complement(18407198..18481029)
Genome browser
AA seq
2419 aa
AA seq
DB search
MEVNEAHVDTLLNMGFPSETDIRHALRFSKNDLNDAVAYLTDDHSTTNFDHLDAQLQLSS
LRTPPESSLVGGGGGGGGGGGGGDQLLPHNRLSGLDFFKPPSEHSDDILTGPEKSAKDPS
IDSVPPLLTAEEETNYEFPVTNLYELESRVFVDQWSIPYRKEESLGKCLLASTYFAEAGF
ADTNEHCKRFMTQCMPEAFKKLMTYPAVHRWTSEIQEGINNMLQLFIDLVVARLKHLPVP
IGLLDVLTMAFDQDAVFHFKNRARQCDKTYWKDKFPNGELYAVNCSGAGKNDPYGWLTNL
INRFAYKKGFEYVKKHLESDDLDAPSMAALLRPFGTCADFLNPSVMLDILAPGLKKAIKY
VQSLEEKDFKEKKVGSVSELLASMKLLCMTMWPQDVEAVDDLRLDVALRMLKSPHFNAKM
NSLKEVSKLIDDATVSKLKTAIHSDRILNFLVDKRVLAIALEGNIDQAQYCDKVKGIVDF
LGSKLSLDELTMIWKMQNGQSNNVIENIYSIIAAAAVKFDAQQLEQLFFLIQKKWQDDND
RVREKLLSLIGKIGKDARVTKTTTRVLELLWDLSHLPALSTHLIEQALNEHLLILSDSYI
VKEQVKRHYVMKCVEDIKKGAWVLPALKQLLHLCKNISKQNLNKSDKGILYELNRNQDVV
KLVTGSLLKCHKMAASVDGNLNPATIVDGRYTHSEYVSTHLNFLQYILQVGIQTLTWNRA
REIWSTLVANVEACDWDKETCYEWFSRGIEDLDSEAVSQLFQKELLKLDPSVLSEKGFTC
VKNFFESANLYEHKLKKSSTGLSLIVEKPDLCGLEFLWETCLNTPNETIAAAAIQLLLDM
SYSNLTPKIKKDPVNLHKKFITECYNRLEVARIGIGGSALGQVILSATKILTAVIVPDVA
SGTVPSNCANKTDQNPVTVETRRPPSRDPIYFRPVKLLNIERLLWIAEAYILNVEEVHVS
PRSILPHGTSFQGQQINLFISSELQKQEFVLMSHSNEMLALVRIKIANHLRQFVDQIQIY
ANEKLLSCNKDQKLLHQLDFEDNQILQVRICSASNAASNNQVKEIQECLRLDQPHASPSS
KQNFDLDQEKMLPGVIMAIGGQVFDMLYQLAELEEPKITCRVRKLLMLIPTDPSISDAFD
SISQRPRHVIFSSLSVQVLSSKLMPTGEEVGVQHSAKRFCEDFLLAGGLALVMHILQPEA
MATDVPYAIRQAAYSISLQLTKFLLCGQTVTGEVYFPLSPQVKTTPSGANWIGSMNVEPS
TGAGSRALQTMSVEDFGETVACLMRITWAAAAGRLHLMSVPQPIRESTVATGRRSRQSST
GSTGSTGSDGEGQTLHAGVCAQQANTSTKDCKIACEALEIFVTCLKLRKELLSVFYSLPC
VSDFITDILVGSPQLDIRNAALEQFYQLSQTELLPAEIDDNNINPHQFMLKVLLKSRLPF
WVSSTTIRGSNQRLLNQCSQYFELRCRLLENLSLTEQSQFGVNPSAMLSDEIDWLSNFVT
SEYIELRTTENMLMAGHLKLCKTLFTCEQVDKEEFGKELISELLDDFLFPASKLIMDNFN
HVRSERLFHNFNPKCTNQESRVAAYDLLTELTKKSFNNLKEICKRLIQMHHMPNPDCANE
WEYMPAVDGRADCGFVGLKNGGATCYMNSVLQQIYMAPGISEFILSVDEEEVDEDSVYYH
VQQIFGHLTDSKLQYHEPESFWKVFKLWGQTINIHEQQDAFDFFQALIDQVDEHMKRIGR
DEIFKRKFQGIFSDQKICKDCPHRYEREEAFFALNLTVKNATLQDSLDQFVKGELLEGDN
AYFCEKCQEKRNTIKRMCIKTLPPLLCIQLKRFGYDWEAQKALKFDDYFKFPWVLDMEPY
TAEGMAWRESESLHNYSDEETSEKSTLGSSCQEDSADGQYVDPVTSTNQVIPNRIHYELV
GIVVHSGQANAGHYYSFIKDRRGTVSTNPKKGCWFKFNDITVEEFHMTDANLEAECFGGF
YKAKVYDQNMTYPEDRIRYWNGYMLFYERMDEPKTPVSAKKSKVSLSKCSHFEPRRSLNS
DSLVELTELVHKGEKRGIFTEKMPASIEKVIGTENIIFVKNRDIYNNEYFRFIKNLAAVN
AAHETDPNYSKLCVQSLQLAMKFLINSYFRAKLKTKAELDDWVTVIEMLVTRCKEACLCL
VDMIGEDDGYTYIKSFLLECPNKDVRLTLAKILQRMMNSFFQHGAVATYKSFDQLVGHLL
HMLNKDLPDNIKNSTQYFLVLKSYVQMGTKACSHMFHRKGFNHLINFLLGTVDKEEELSS
RRWIPIQARDFGHLQTTLATLILNCDVSSYRTDEPDPFKVYTPQTVSPQLYLKMSDDMFY
FVFGAGSYRYINEVVYAVREVSSNLDSVTDMLLACSFCNSTFSMTVLECLMVQYQTAPCN
EVRNIFSLLMEILVRFCSK
NT seq
7260 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaacgaggctcatgtggacactttgctgaacatggggttccccagcgaaact
gacatccgtcacgctcttcgtttcagtaaaaacgatctgaatgatgcggttgcctacctc
accgatgaccactccaccaccaatttcgaccatttggacgcacagttacaactgtcatca
cttcgtacgcctcctgagtcgtctctggtcggcggcggcggcggtggtggaggtggcggc
ggcggcggggaccagcttttgccccacaacagactctcgggcctcgatttctttaaacct
ccctcagaacactcggatgatatcctcaccggacctgagaaatctgctaaagacccttca
attgattctgtgccccctttactcactgctgaagaagaaactaactatgagtttcctgtc
actaatctctatgaattggaaagtcgagtgtttgtggatcaatggtcaatcccgtatcgt
aaagaagaatccctcggcaaatgtctccttgcttccacttattttgcagaagcagggttt
gctgacaccaatgaacactgtaagcgcttcatgacacaatgtatgccggaagcttttaaa
aagctgatgacataccctgcagtccatcggtggacgtctgagattcaagaaggaatcaac
aacatgttgcagttattcattgacctcgttgttgctcgtttaaaacatttacctgtcccc
attggactccttgatgtcttaacgatggcgtttgaccaagatgctgtgttccacttcaag
aaccgtgcccgacaatgtgacaaaacctactggaaggacaagtttccaaatggagaactt
tatgctgtcaattgttccggagcaggaaaaaacgacccttatggctggctcaccaacctc
attaacaggtttgcttacaaaaagggctttgaatacgtgaaaaaacatttggagagtgat
gatttagatgcaccgtctatggcagctcttctgcgtccatttggtacttgtgcagacttt
ttaaacccttcggtgatgttggatattctggccccaggtttaaagaaggccatcaaatat
gttcagagtttggaagagaaagactttaaagaaaagaaagttggcagtgtttctgagtta
ctggcttccatgaagcttttatgtatgactatgtggccccaggatgtggaagctgttgat
gatctgcgattggatgtggcactccgaatgctcaaatctcctcactttaatgccaaaatg
aattccctaaaagaggtctccaaactcattgacgatgccacagtcagtaagttaaagact
gccattcactcggacagaattctcaactttttggttgacaaacgtgtgctggctattgcc
ctagaaggaaacattgatcaagctcaatattgtgataaagtgaaaggtattgtggacttt
ttgggatccaaactgtctttggatgaactgacaatgatttggaagatgcagaatggccag
tctaacaatgtgatagagaacatctactccatcatagccgctgcagctgtgaagtttgat
gctcaacagttagaacagttgttcttcctcatacaaaagaaatggcaggacgacaatgac
cgtgtccgagagaaattattgagtctcattggcaagattggtaaagacgctcgtgttacc
aaaactacaacacgggtgttagagttgttgtgggacctgtctcacctacctgccctttct
acccacctcatagaacaagctcttaatgagcacctgctcattctcagtgattcttacatc
gtcaaggaacaggtgaagcgacattatgtgatgaagtgtgtggaagacattaagaagggt
gcctgggtgttgccagccctgaaacagttgctgcatttatgtaaaaatatttccaagcag
aatctcaacaaatcagacaaaggcatcctttatgaactcaatcgcaatcaagatgtggtg
aaactagtgactggaagtttattaaaatgccacaagatggcagcaagtgttgatggtaac
ttgaaccctgccactatagttgatggtcgctatacacactctgagtatgtgtcaactcat
ctgaacttcctgcagtatattcttcaagtcggtattcagactttaacttggaaccgagct
cgggaaatttggagtacgttggttgctaatgtcgaggcttgtgattgggacaaagagaca
tgttacgaatggttcagtcgtggaattgaggatttagactctgaagctgtcagccagttg
ttccagaaagaactgctcaaattagatccttcggttctcagtgaaaaaggctttacctgt
gtgaagaacttttttgaatctgccaacctttatgagcataaactgaagaaatcttctaca
ggccttagtttgattgttgagaaaccggacctgtgtggactcgaattcctctgggagacc
tgtttgaacaccccaaatgagacgatagcagcagcagccatccaattactccttgacatg
tcatattcaaatttaactcctaaaataaaaaaggatcctgtgaaccttcacaaaaaattc
atcacagaatgttacaacagactggaggtggcccggataggaattggtggctccgccctg
ggccaagtgattctcagtgccactaaaatactaactgctgtcattgtaccagatgttgct
tctgggactgtaccatccaactgtgccaataaaactgaccagaatccagtcacagttgaa
accaggcggcccccttcccgggaccccatttacttccgaccagtgaagctgctgaacata
gaacgtttattgtggatagctgaggcgtacatcctaaacgtggaggaggtccatgtaagt
ccgcgcagtatcctaccccatgggacttcattccagggtcaacagattaatctgttcatc
tcatcagaattacagaagcaagagtttgtcttgatgagccatagtaatgaaatgttagcg
ttggtgaggatcaagattgccaaccatctccgacagtttgttgatcaaattcagatttat
gcaaatgagaaacttttgagctgtaacaaggaccagaaactgctgcatcaattagacttt
gaagacaaccagattctgcaagtgcgtatctgctctgccagtaacgctgcatcaaacaac
caggtgaaagaaattcaagaatgtctacgacttgaccagccccatgccagtccatcatct
aaacagaattttgatttggatcaggagaagatgcttcccggtgtgattatggcgattggt
ggacaagtttttgatatgttgtatcaattagctgaactggaagagccaaaaatcacatgt
cgggtgaggaagctgttgatgttgatccctactgacccttccatatcggacgcctttgat
tccatcagtcaacgaccacggcatgttattttctcctctctttctgtgcaggtgctgagc
agtaaattgatgccaacaggtgaggaggttggggtccagcacagtgccaagcgtttctgt
gaggacttcctgctggctggtggcctggcgttagtgatgcacatccttcagccagaagcc
atggcaacagacgtaccatacgccatacgtcaggcagcatactccatctctttacagtta
accaaattcctgttgtgcggtcaaacagtgaccggtgaagtgtatttccccctgtccccc
caggtgaaaactactcccagtggagccaactggattggtagtatgaatgtagagccatcg
actggagccggtagcagagctctccagactatgtcggtggaagattttggagagacagtg
gcctgtctgatgcgcatcacatgggccgcagctgcaggtcgccttcatttgatgagcgtt
ccccaaccaattagagagagcactgttgccacaggccgacgcagtcgtcaaagtagtaca
ggtagtactggtagtacaggaagtgacggtgagggccaaacccttcatgctggggtttgt
gcccagcaagccaacacaagtaccaaagattgtaagattgcatgtgaagctctggagatt
tttgtaacctgcctgaaactacgaaaggagctgctctccgtcttctacagtttgccgtgt
gtcagtgacttcattacagacattttggtcggttcaccccaacttgacattcgaaatgca
gccctggagcagttctaccagctgagccagactgaactgttgcctgctgagatcgatgac
aacaatatcaatcctcatcagttcatgttgaaggtcttgctcaagagtcgactcccgttc
tgggtctcctccactacaatcaggggcagcaatcaaaggttactcaatcaatgttcgcaa
tactttgaacttcgatgtcgtctgctggaaaacctatctttgactgagcaaagccagttt
ggcgtcaacccatcggctatgttgagtgatgagattgactggctcagtaattttgtcacc
tctgagtacattgagcttcgtaccacagaaaacatgctgatggctggtcacctgaaattg
tgtaaaacactgtttacctgtgaacaagttgataaagaagaatttggcaaagagttgata
tctgagctgcttgatgacttcctgtttccagcatcaaaacttattatggacaatttcaat
catgttagatcggagagactcttccataattttaatcccaaatgcaccaatcaagaatcc
agagttgcagcctatgaccttctcactgagttgaccaagaaatcattcaataatttgaag
gagatttgtaaacgcctcattcagatgcatcacatgccgaaccctgactgtgccaacgag
tgggagtacatgcctgctgttgatggccgagcagattgtggttttgttggtctgaagaat
ggtggtgccacctgctatatgaactccgtcctacaacagatctacatggcacctggcatc
tctgagtttattttgtctgtcgatgaagaggaagtagatgaagacagtgtgtattaccat
gtacaacagattttcggacatctgactgatagcaagcttcagtaccacgaaccagagagt
ttttggaaagtatttaaactgtggggtcaaacgataaatatccacgaacaacaagatgca
tttgatttcttccaagctcttattgatcaagtcgatgaacatatgaaacgaatcggacga
gatgaaatcttcaaacgtaaatttcaaggaattttctctgaccaaaaaatttgcaaggac
tgccctcatcgctatgaacgagaagaagctttctttgccctgaatttgacagtcaaaaat
gccactttacaagattctctggaccagtttgtgaaaggggaacttctggaaggagacaat
gcttacttttgtgaaaaatgtcaagaaaagaggaacaccatcaaacgtatgtgtatcaaa
acactgccaccattgttgtgcatccagttgaagaggtttggttatgactgggaggcgcag
aaagcattgaagtttgatgactatttcaagtttccctgggtcctcgacatggagccttat
acagctgaagggatggcatggcgagaaagtgaaagccttcacaattattctgatgaggaa
actagcgagaaatcaacgttggggtcgtcatgtcaggaagactcggcagatggtcagtat
gtggatccagtcacctcaacaaaccaagtcataccaaaccgaatacattatgaacttgtt
ggcattgtcgtccatagtggtcaagctaatgctggccactactactcctttattaaagac
cgcagaggaacagtctcaacaaatcctaagaagggttgctggttcaaattcaacgacatt
acagtagaagagtttcacatgacagatgccaaccttgaagctgaatgctttggtggattt
tacaaagcaaaagtttatgaccaaaacatgacctaccctgaagatcggatccgttattgg
aatggttatatgttgttctatgaacgaatggatgaaccaaagacacctgtttctgcaaag
aaatccaaagtttctctgtctaaatgttctcattttgaaccaagacgcagtttgaactct
gacagcctggtcgagttaacagagttggtccacaaaggggaaaaacgtggtattttcaca
gagaagatgccagcaagcattgagaaggtgattggcaccgagaacataatctttgtcaag
aacagagacatttacaacaatgagtatttccgtttcatcaagaacctggccgcagttaat
gcagctcatgaaactgaccccaactacagtaagttatgtgtacagtcgctccagctggcc
atgaaattcctcatcaattcgtacttcagagcaaaactgaagacaaaggctgagttagat
gactgggtcactgtgattgagatgttggtcacccgctgcaaagaagcctgcctgtgcctg
gtcgacatgattggagaagacgatggttacacctacatcaagtcctttctgctggaatgt
ccaaacaaagatgttcggcttaccctggccaaaatcctccaacgtatgatgaatagcttc
tttcaacatggtgctgtagctacatacaaatcctttgaccagttggtgggtcatctgctc
cacatgctaaacaaagatcttcctgacaacatcaaaaactccactcaatatttcctcgtt
ctcaaaagttacgttcagatgggtaccaaggcctgcagccacatgttccatcggaagggc
ttcaatcatctgatcaactttctacttgggaccgtcgacaaagaagaagaattatcatct
cgtcgatggataccaattcaagcccgagattttggccacctgcagacgacccttgctact
ttaatcttgaactgtgatgtctccagctacagaactgacgaacctgatcccttcaaagtc
tacaccccacaaactgtttctccacagttgtaccttaaaatgtctgatgacatgttttac
ttcgtctttggtgcaggatcctaccgttacatcaacgaggtggtgtatgccgtacgtgaa
gtcagttcaaatctagactccgtcaccgatatgctattggcctgtagtttctgcaacagc
actttcagtatgacagtcctcgagtgcttgatggtccagtaccaaacagctccctgtaac
gaagtgcgcaacatattttccttactcatggagattctggtaagattttgctcaaaatag
DBGET
integrated database retrieval system
