KEGG   Octopus bimaculoides (California two-spot octopus): 106874107
Entry
106874107         CDS       T04127                                 
Name
(RefSeq) polyadenylate-binding protein 4-like
  KO
K13126  polyadenylate-binding protein
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03015  mRNA surveillance pathway
obi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106874107
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106874107
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obi03019]
    106874107
   03041 Spliceosome [BR:obi03041]
    106874107
Messenger RNA biogenesis [BR:obi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     106874107
   mRNA cycle factors
    Stress granule specific factors
     106874107
Spliceosome [BR:obi03041]
 Complex C
  Other components
   Complex C specific factors
    106874107
SSDB
Motif
Pfam: RRM_1 MLLE RRM_5 RRM_Nup35 RRM_7 RBD_DEAH11 RRM_occluded
Other DBs
NCBI-GeneID: 106874107
NCBI-ProteinID: XP_014777200
UniProt: A0A0L8IDS3
LinkDB
Position
10:45502006..45505655
AA seq 631 aa
MSELNLLKVSLYVGDLHPEVTESQLYDKFVKIGPIESIRVCRNVLTKKSLGYAYVNFQNY
LDAEKALDTLNFEAILGRPMRLMWSQRDPSLRRSGKGNVFIKNLDSSIDNKSLLDTFSAF
GCILSCKIISDETGSKGYGFVHFEEEKAAEEAINKVNGMLLNGKTVYVAKFIPKKDRLKE
KYKFSNVYIKNFGTDLDDEGLKNIFSKFGDIVSVKVMTDEQGQPRGFGFVSFEKADDAER
AVKELDGLELNGRTLFIGRAQKIEERKKMLKEKFDIPKTEEKFRYSGFNLYVKNLDEDFD
DERLYQEFSKYGDISSARVMMQNGRSKGFGFVCFDQQEAADKAIKEMNGRIVLQKPLFVT
FAQSKDERKKNINNLKDSVPDTHSIIPPVTASYYLPTLPSRTSYPSQMHIGNVSRWQSPL
IHQIPNQVNYNRLPTNHLKLRNSQNTRPFTGQPTGYRQNISPSFSGSGPSFMNTRPLYDN
STHARNMEALAMPHHLHNASLLHHTINPIPQQFKVPTQLTNLFQIPSVQQTKPEFTEKSL
DSLSAVSPQEQKHFLGERLFPEVKKINDIMAQKITGMLLELDSSDIIHLIESPNVLREKV
REAEMVLQQNTREKSFELDNTNLFSATMGYA
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgagcgaattgaatttacttaaagtgtcactgtatgttggtgacttacatccagaggta
acagaatctcaactttatgacaagttcgtgaaaattggaccaattgaatctattcgtgtc
tgtcgaaacgtgctaactaagaagtctctcggttatgcttatgtcaactttcaaaattat
ttggacgctgaaaaagcattggatacattgaatttcgaagcaattcttggccgaccaatg
cgtttaatgtggtcacaaagagacccatcccttcgtaggtctggtaagggtaacgttttt
attaaaaatcttgactccagtatcgacaataaatctctacttgacactttttcagcattc
ggttgtattctgtcttgtaaaataatttctgatgaaactggttcaaaaggttatgggttt
gttcatttcgaagaagaaaaggcagcagaagaggccattaacaaagtcaatggcatgtta
ctcaacggaaagacagtttatgtggcaaaatttattcccaagaaagatcgtttgaaagaa
aaatacaagtttagtaatgtttatataaaaaatttcggaacagatttggacgatgaaggc
ttgaaaaatatcttctcaaagttcggcgatattgtgagcgtcaaagtaatgacagatgaa
caaggtcaacctagaggctttggatttgttagtttcgaaaaagccgacgatgctgaaagg
gctgtcaaagaattagatggtcttgagttaaatggaagaacattatttatcggtcgcgct
caaaagatagaagaacgcaaaaaaatgctaaaagagaaatttgatatccccaaaacagaa
gaaaaatttcggtattctggatttaatctttatgtgaaaaaccttgatgaggattttgat
gatgaacgattgtaccaagaatttagcaaatatggcgatattagcagtgcccgtgtaatg
atgcaaaatggtcgctcaaagggttttgggtttgtttgctttgaccaacaagaagctgca
gataaagccataaaagaaatgaatggtcgcattgtactgcagaaaccattgttcgttacc
tttgctcaaagcaaagatgaacgtaagaaaaacataaataatctgaaggattctgttcct
gatactcattcgattattccaccagttactgcaagctactatttgccgacacttcccagt
cgcacctcttacccatctcaaatgcatatcggcaacgtgtcacgttggcaatcgccattg
atacatcagattccaaaccaagtaaattacaacaggctaccaacaaatcatttgaagctg
agaaatagtcagaatactcgcccttttactggtcaaccaactggctacagacaaaatatc
tcgccgtccttcagcgggagtggtccaagctttatgaacacgcgcccattgtacgataat
agtactcatgctcgtaacatggaggcactagctatgccacaccacttgcacaatgcgtct
ttattgcatcatacgatcaatccaatccctcaacaattcaaggttcccacacagttaacc
aatctatttcaaataccgagtgtacagcaaacaaaaccggagtttactgaaaaatctctg
gatagcctttctgccgtctctcctcaggaacaaaagcatttcttgggagagcgtttgttt
cctgaagtcaagaaaataaacgatataatggcccagaaaattactggtatgcttcttgaa
ctagactcttccgatattattcacttaattgagtcccccaatgtgctgcgagaaaaagtt
cgtgaagctgaaatggtattgcaacagaatacgcgtgagaaatcgttcgagttggacaac
accaatttattctcagctaccatgggctatgcttga

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