Octopus bimaculoides (California two-spot octopus): 106874110
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Entry
106874110 CDS
T04127
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obi04131
]
106874110
Membrane trafficking [BR:
obi04131
]
Protein recycling
Others
EARP complex
106874110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
DegS
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
106874110
NCBI-ProteinID:
XP_014777198
LinkDB
All DBs
Position
15:1839055..1872606
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AA seq
947 aa
AA seq
DB search
MDIKKKLKLLIGKQDSIQSPTDEAVISPQQLSSDPAVTKSKAEQFRDPHVDQEILESIES
FYYNSEQFDTSEYELKKLPETLELSQIDADRARLRGQLDVVSRKVYELVLQNHPAYVTEL
QRVMELQKTLQSAGGICTTGRSQLLKARESFTATSLGLLANYRKRSQLMSLLKSLHTIKT
LVKTSISLSLSPQEEDYSGAIQLCLECQNAASTFRHYHCISELNFKLQDTLELIEEQLDV
ALSKTCNSFDVAHYSKVQTAYRLLGKTQVAMDQLHMHYTSAIHNTAFTIVLGYVELYSGT
TSTNFQKKQYSDLCKHITVESFTPCLTDLCKALWEVMKCHYKTMLWHKQHNADTPDSEPP
SNNEELSFNQRYVQQKLQHGMLRIWQDVQQKVKTFILGTDLSFFKFEEFILVLDLVNRLI
EIGEEFCGSKSESLQDVLRQQSLNYFRNHHRSRMDELRMFLENEGWELCPVRSNFNLLQL
LEFRFMQNWNLNTSSNSSMCSGNQFDTKEELGGYFSNLEEKRNPFDLQLEEDEQEDVFAR
TLDRDDLDGSIGSDSDSDVADELKQEFVDEHTGDMQTHNHRPRARSRSGLKSVAIVTNTS
LNILRVIGRYMKMMNILKPIAFDVISCMSQLFDYYMYSVYIFFSSDGPEINDITMKNRLK
ITLQRVGESLIADGSVSVGNGLVPPEKTDKIRQAYLSPTVNLTNPQKLFGLSERIVAAES
LVFLAEQFEFLQPYLDSMIPVNKKAFLQQFYSQTVKMASELRKPIYRVVSSQVIDYGSLV
QQMSAVKWDVKDIMSQHNTYVDSILESFQDFRNRLHEVSRHVPVSKVVHDIIWEHCISLA
NHMFVEGYANAKKCTNEGRAWMQLDFQQFLTKLEKFADIRPIPEREYVETYIKAYYLPEA
QLEIWLQDHKEYSNKQLLALITSVDHINRKARQRLVNMVEEFDKTRR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggacataaagaagaaattgaagctgttgataggcaaacaggacagtatccagtcccct
acagatgaagccgtcatcagccctcaacagttgagttctgacccagctgtaacaaaatct
aaagctgaacagtttcgggatccccatgtggatcaggaaatactggaaagcattgaatcc
ttttattataactcggaacagtttgacaccagtgagtatgaactaaagaaattacctgag
acattggaactaagccagattgatgccgacagagcaagattaaggggtcaactggatgtg
gtgtcaaggaaggtttatgaattggtactgcagaaccaccctgcctatgtcacagaacta
caacgtgtcatggaattacagaaaaccttgcaatcagcaggtgggatatgtaccacagga
cgtagtcaactactgaaagccagagagagttttactgcaacaagtcttggcttattggca
aattaccgtaaacgaagccagctaatgtcgttacttaagtctctacacacaatcaaaaca
ttggtaaaaacgtccatctctctctctctctctccacaggaagaagactacagtggtgcc
atccagttatgtctagagtgccaaaatgctgccagtaccttcagacattaccattgtatc
agtgaactgaatttcaaactccaagacactttggaactcatcgaagaacaactagatgta
gcattgtcaaagacctgcaacagttttgacgttgctcactacagcaaggtgcagacggcc
tacagacttctgggtaagacacaggttgccatggaccagctacacatgcattacaccagt
gcaatccacaacacagcgttcacaatcgttcttggttatgtggagctctactctggcacc
acttcaaccaactttcagaaaaagcaatattcagatttatgcaaacacatcactgtagag
agttttacaccgtgcctcactgacctctgcaaagcattatgggaagtgatgaagtgccac
tacaagacaatgttgtggcataaacaacacaatgccgacacaccagactccgagccaccg
tccaacaacgaggaactgtcgttcaaccaacgttatgttcagcagaagctccagcatggc
atgttgcgtatctggcaagatgttcaacagaaggtgaagacattcatcctgggaaccgat
ttgtctttctttaaatttgaggaattcattctcgtattggatctcgttaacagattaata
gaaattggtgaagagttttgtggcagcaagtctgagagtctgcaagatgtccttcgacaa
caaagtcttaattatttccgcaaccatcacagatccagaatggatgagttacggatgttc
ctggagaacgaaggctgggagttatgtccggtgcgatccaactttaacctccttcagctt
ttggaattccgatttatgcaaaactggaatttaaacacttccagcaattcttcaatgtgc
agcggcaatcagtttgacacgaaggaagaattaggtggttacttcagtaatttagaagag
aaacgaaacccatttgatcttcagcttgaagaagatgaacaggaagatgtctttgctcga
acactggaccgtgatgatctcgacggcagcattggcagtgacagtgactcggacgttgcg
gatgaactgaagcaggaatttgtcgatgaacacactggtgacatgcagacacacaatcat
cgacctcgtgcacggagcagaagtggattaaaatctgtagccattgttaccaacacttct
ctgaatatactccgagttatagggagatacatgaaaatgatgaacattttgaagccgatt
gcctttgatgtgatcagctgcatgtctcagctgtttgactactacatgtactcggtctac
attttcttcagttctgatgggccagaaatcaatgacatcacaatgaaaaaccgactgaaa
attacgttacaaagagttggtgaaagtttaattgctgatggttctgtgtcagttggcaat
ggattggtgccaccggagaaaacggacaagatccgccaggcctacctctcaccaaccgtc
aacctcaccaatcctcaaaaactatttgggctttcagagagaatcgttgctgctgaatca
cttgtgtttctggccgaacaatttgaattcctgcagccatacctggacagtatgattccg
gtcaacaagaaagcatttctccaacagttttattcacaaactgtgaagatggcaagtgaa
ctgcgtaaaccaatctaccgtgttgtgtcgtcgcaagtgattgattacggaagccttgtc
cagcagatgtcagcagtgaagtgggatgtgaaggacattatgtcccaacacaacacatac
gttgacagcatcttggaaagtttccaagacttccgtaatcgtcttcatgaagttagtcgt
catgtcccggtctccaaggttgtccatgacatcatctgggaacactgcatatcgttggcc
aatcatatgtttgttgagggctatgccaacgccaaaaagtgcaccaatgaaggtcgtgca
tggatgcagctggactttcaacaattcctcaccaaacttgagaagtttgctgacatcaga
ccaattcctgagagagaatatgtcgagacttacatcaaggcttattatttacctgaagca
caacttgagatttggttacaagaccacaaggaatactcaaacaagcagctgttggctttg
atcacatcagtggaccacattaaccgtaaagcacggcaacgattggtgaacatggtggag
gagtttgacaaaacaaggagatga
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