Octopus bimaculoides (California two-spot octopus): 106874159
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Entry
106874159 CDS
T04127
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03015
mRNA surveillance pathway
obi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106874159
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106874159
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
obi01009
]
106874159
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106874159
03036 Chromosome and associated proteins [BR:
obi03036
]
106874159
Protein phosphatases and associated proteins [BR:
obi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
106874159
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
106874159
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
106874159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
106874159
NCBI-ProteinID:
XP_052831600
LinkDB
All DBs
Position
22:4889859..4955980
Genome browser
AA seq
496 aa
AA seq
DB search
MIWDYRLRSSTRNNQMKTAENGNGGEIQWCFSQVKGTIEEDITEADIISCVEFNSDGELL
ATGDKGGRVVIFQHDKSVSTCSVFFSVILFCVSFFFFYICTMSCTCGCDACAWCTLIRRV
VMMGILGFVYFCPSVPLVACTALSLNNNNNNNNNNNDNNDVVFVSDKTIKLWKVTERDKR
PEGYNLKDEGGLSRDSTNITALRVPVFKPMELLVEASPRRIFANAHTYHINSISVNSDQE
TYLSADDLRINLWHLEVTDQSFNIVDIKPANMEELTEVITAAEFHPTECSLFVYSSSKGT
IRLCDMRAQALCDRHAKLFEEPEDPTNRSFFSEIISSISDVKFSHNGRYMITRDYLSVKV
WDLQMDSRPIETYQVHEYLRNKLCSLYENDCIFDKFECAWSGGDRYIMTGSYNNFFRMFD
RETKRDITLEACRENMRTRTILKPRKVCTGSKRKKDEISVDCLDFSKKILHTAWHPLENI
LAVAATNNLYIFHSKD
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatatgggactaccgtctgaggtcctctacacgtaacaaccagatgaaaactgcagaa
aatggtaatggtggggagatccagtggtgtttttctcaagtgaaaggtaccatagaggaa
gatatcactgaagccgacattatttcatgtgtagagtttaatagtgatggagaactatta
gccaccggtgacaaaggtggacgtgttgtcattttccaacatgacaaatctgtaagtact
tgttctgttttcttttcagtcattttattttgtgtgtcatttttttttttctacatttgt
accatgtcgtgcacatgtggttgtgatgcatgtgcctggtgtacccttatcagacgagta
gtcatgatgggtatattgggcttcgtatatttctgccccagtgtccctttggtggcatgc
actgctctctcactcaataataataataataataataataataataatgataataatgat
gttgtttttgtttcagataagacaataaaattgtggaaggtgacagaacgcgataagcga
ccggaaggttacaacctgaaagatgaaggtggtctgtctcgggactccaccaacatcaca
gctttacgtgtcccagtattcaaacccatggagctgttagtggaggcgagtccgcggcgt
atttttgctaatgctcacacttatcacatcaattccatttctgtcaacagtgatcaggag
acttatttatcagctgatgacctgaggatcaatttatggcatttagaagttactgatcaa
agtttcaatattgttgatatcaaacctgctaatatggaggagttgacagaagttataact
gcagctgaattccacccaacagaatgcagtctatttgtatatagcagtagtaaaggaact
atcagattatgtgatatgagggcacaagccttgtgtgaccgacatgcaaaactatttgaa
gaaccagaagatccaacaaaccgaagctttttctcagaaatcatctctagtatatcagat
gtaaagtttagtcataatggccgatacatgataacgagagattatctgtctgtaaaagtt
tgggatttgcagatggattcccggccaatagaaacttatcaagtgcacgaatacctccgc
aataagctttgctcactatatgaaaatgactgtatatttgataaatttgaatgtgcttgg
agtggaggtgaccggtacattatgactggttcttacaacaatttctttcgcatgttcgac
agagaaactaaacgtgatataacattagaggcttgccgtgaaaatatgagaacaaggact
atattaaaacctaggaaagtttgtactggcagcaaacgtaagaaagacgaaataagcgtc
gactgtttagactttagcaaaaagattcttcacacagcctggcatcctttggaaaacatt
ctggctgtagctgctactaataatttgtatattttccacagtaaagattag
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