Octopus bimaculoides (California two-spot octopus): 106874199
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Entry
106874199 CDS
T04127
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106874199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obi04131
]
106874199
Membrane trafficking [BR:
obi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
106874199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
DUF6946
Motif
Other DBs
NCBI-GeneID:
106874199
NCBI-ProteinID:
XP_014777339
LinkDB
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Position
1:complement(9028753..9066219)
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AA seq
823 aa
AA seq
DB search
MPSTPQLSPQEEQEKLLDEATKVVKSQSFQMKRCLDKGKLMEGLKHASNMLGELRTSLLS
PKTYYELYMAISDELRHLELYLVEEFQKGRKVADLYELVQYAGNIVPRLYLLITVGVVYI
KSNELSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDVADEAGNSANNQEVWS
PKHVDGRERNGEGDYGSIRDSIDFILLNFSEMNKLWVRMQHQGHSRDKDKREQERRELRI
LVGTNLVRLSQLETIDVDKYKKVMPGILEQVVSCRDAIAQEYIMECIIQVFPDEFHLQTL
NGFLRACAELQQSVNINNIIIALIERLAHYAQNEESSGIPSDIPLFDIFTQQIALIIQNR
QDMPPEDIVALQVALINLALKCYPDRVDYVDKVLETTVEIFNRLEMEQLKYGTAVSKELM
HLLKIPIDVYQNLLTVLELKHFGPLFKYFDYHGRKTMSAFLINSALENDTKILTPEQVDD
ILNIVSILIKDQSDQPEEPDDPEDFSEEQGLMGRFIHLMVSDDPNQQFHILNTARKHFSN
GGNARIKFTLPPIVFAAYRLAFLYHSLQEEDEQWQKKCGRIFQFCHQTIGALIKAEQAEV
PLRLFLQGAIAAGKIQYENYESVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTLEQMS
CFSEENHEPLRTQCALAASKLLKKPDQCRGVATCSHLFWSGKKNNQEENSPKIFVKMHDG
KRVAECLKKGVKIANQCMDNSVQVQLFVELLNHYIYFFEKGNDQITIPVLNQLITKIRED
LPNLEANEETEQINKHFQNTLEHLQMRIANNDSGSPSYEGLTL
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaacaccacaattatcaccacaggaagagcaagaaaaacttctcgatgaagct
acaaaagtggttaagagtcaatcttttcagatgaaaagatgtttggacaaaggaaaatta
atggaaggcttaaagcatgcttcaaacatgctgggagagctgaggacatctttattgtct
ccaaagacctattatgagctctatatggccatctctgatgaattgcgtcatttggagctc
tatcttgtagaagagttccagaaaggtcgaaaagttgctgacttgtatgaacttgtacaa
tatgctggcaatatagtgccacgcctctatttactcataactgttggtgttgtttatatc
aaatcgaacgaactctctcgcaaagacattctgaaagacttggtagagatgtgccgtggt
gtccaacatcctcttcgaggtctctttttgagaaactacttattacagtgtactcgcaat
gttttaccagacgtagctgacgaagcaggaaattctgccaacaatcaagaggtttggagc
ccaaagcatgtagatggcagagaaagaaatggtgagggagactatgggtctatacgtgat
tccatagacttcatcctgctgaatttctctgaaatgaataaattatgggtccgcatgcaa
caccaaggccattctcgtgataaagacaaacgtgagcaagagagacgagaattgcgtatc
ttggttggaaccaatctcgttcgcttgagtcaattagaaacaattgatgtggacaaatat
aaaaaggtgatgcctggcattttggaacaggttgtgagttgccgtgatgccattgcccaa
gaatacatcatggagtgtattatacaggtcttccctgatgaattccatcttcagactctg
aatggtttcttgagggcctgtgctgaattgcaacaatctgtaaacattaataacattatt
attgctttaattgaaagattggctcattatgctcaaaatgaggaaagttctggaatccct
tctgatattcctttgtttgacatattcacacagcaaattgctttaattattcagaaccgg
caagacatgcctcctgaagatattgttgctctgcaggtagctttgattaacttggcgctg
aagtgttaccctgaccgagtggattatgttgacaaagtattagaaacgactgttgaaata
ttcaatcgccttgaaatggaacaactgaaatatggaactgctgtctccaaagaattaatg
catttgttaaagattcctattgatgtctaccaaaatcttctgactgtattggaactgaaa
cattttgggcctctcttcaaatattttgattatcacggtcgcaaaacaatgagtgctttc
ctgattaacagtgctcttgaaaatgacacaaagatcctcacaccagaacaggttgatgac
attttaaacattgtttccatcttgataaaagaccaaagtgatcaaccagaagaaccagat
gatcctgaagatttttctgaagaacaaggattgatgggaagattcatacatctaatggta
tcagatgatccaaaccagcaattccatattttgaacacagctcgtaaacatttcagcaat
ggtggtaatgctcgaataaagtttactttacctccaattgtctttgctgcataccgcctg
gctttcctctaccattctctccaggaagaggatgaacagtggcaaaaaaaatgtggccgt
atatttcagttctgtcatcagaccattggtgctttaattaaggcagaacaagctgaggtt
ccattaagattatttttgcagggcgcaatagctgcaggaaaaatccagtatgaaaattat
gaatctgttgcttatgagttcatgtcacaggcattttctttatatgaagatgaaatcagc
gatagtaaagcacagcttgctgccatcaccttgattattggtactttagagcagatgtct
tgcttcagtgaagagaatcatgaaccactgcgtacacaatgtgctctcgcagcatctaaa
cttctgaagaaacctgaccagtgccgtggtgttgctacttgttcccatttgttttggtct
ggaaagaagaataaccaggaagagaattcccctaagatctttgtgaaaatgcatgatggg
aaacgagtggcagaatgtctgaagaagggagtcaaaattgccaaccagtgcatggacaat
tctgttcaagttcaactttttgttgaacttctcaatcattacatttatttctttgaaaaa
ggaaatgatcaaataactattccagtattaaaccagcttattacaaaaatccgagaagat
ttgccaaatttagaggccaatgaagaaacagagcaaattaacaagcattttcagaacaca
ttggaacatctccaaatgcgtattgcaaacaatgattctggtagtccatcttatgaagga
ctgacactatag
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