Octopus bimaculoides (California two-spot octopus): 106874306
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Entry
106874306 CDS
T04127
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106874306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obi03400
]
106874306
DNA repair and recombination proteins [BR:
obi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
106874306
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ZGRF1-like_N
HDA2-3
Motif
Other DBs
NCBI-GeneID:
106874306
NCBI-ProteinID:
XP_052829440
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All DBs
Position
1:197240430..197293562
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AA seq
908 aa
AA seq
DB search
MRRSIAPSQTGAAKRTRFLTPFKGENEDRKNVPLFNRGLNVLTNPDTDQNGDYKNDENSS
QNSSSPASIPRTFACAKSNPSIASSQSTGKTHLAVYHSPLALSSENKQDNESNVQNGSNS
AASPSVENYYSVVWSKLSKKKHKKWEGDAVLVTHGRKVTLYDMDGKEIGKMSGYKESMLS
SLEEDHTLTVGGKEILVMSRLPEESFKSGKCFLPGGGAPSSAPSKSKDVISRPFVNPQLN
TATNNNSSKFQKTAADQVDTLAPRHDPLAFNALVMPRPSQDHQVCCICFSCSIVLTSAFP
YLQTQRVWPYQGTVSVFVDDMGLGKTLQCIGLLWTLYKQGPYGGKPILQRILIVTPSSLV
KNWYQEFKKWLGTERISVFTVEADKKIEEYLSCPKCPVLIISYEMFLRNVKELEKVSFDL
IICDEGHRLKNTSIKTSALLNSLPVRRRLVLSGTPVQNDLQEFFAIVEFCNPGILGTSSS
FHKIYELPIITSRQPTASKDDVNLGMERAAELNRLTKLFLLRRCQDINNKYLPPKVELVV
FCRPSSLQLTLYRQILTSQMIRRFLAGHYDGASHLISIAALKKLCNHPALLYQSLVSNDS
DEDEEGSVYQGLAAFYPQGYSVKDKLLEHGSKLNVLAAILSGVFATTPREKVVLIANHTK
TLDLLSDFCESQGYICCRLDGQTPSNNRLNIVKQFNTQNSNHFIFLLSLKAGGVGLNLVG
ASRLILYDIDWNPANDIQAMARVWRDGQKRKVHLYRLLTTGTIEEKIYQRQINKQSLSGA
VIECREKGKVKFSLEELRDLFTLNEQTQCDTHDLLKCPCRTGGHVEEIPNKLTPVRPCQL
GAVPETDVMGKKNLTMDELMDWKHLSPDEFSSHLEWHLPSGPAEENYVTFAFWSETKNVF
ITEDKSVL
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgttctatagctcccagccaaacaggagcagcgaagaggacaaggtttttgaca
ccttttaagggggagaatgaagaccgaaagaatgttccccttttcaacagaggtttgaat
gttctgacaaacccggacacggatcagaatggagactacaaaaatgatgaaaattcctcg
caaaacagttcctcgccagcttcaattccacgtacatttgcatgtgcgaaaagtaaccca
tcgatcgcatcgagtcagtcaactgggaaaacacatttggcagtataccattccccactg
gctttatcgtcagaaaacaaacaagataatgaaagcaatgtccagaatggatctaattct
gcagcctctccatctgtagagaattattactctgtagtttggagcaaactctcaaagaag
aagcacaaaaaatgggaaggtgatgctgtattagtgacccatggacgtaaagttaccctg
tatgatatggatgggaaagagattggtaaaatgtctggttataaggaatccatgctcagt
tctcttgaagaagatcacactttgacagttggcggcaaagaaattttggtaatgtctcgt
cttccagaagaaagctttaaatcagggaagtgtttcctgcctggtggaggggcaccgtct
tctgctccatccaaatcaaaagatgttatctccagaccttttgtcaatcctcaattaaac
actgctacaaacaataattcttctaaatttcaaaagactgctgctgatcaagtggacact
ttggcacccagacatgatcctttagcctttaatgcccttgtgatgccaagaccaagccag
gaccatcaggtttgttgcatttgcttcagttgcagtattgttttaacatccgcttttcca
tatttgcaaacccaaagggtgtggccataccagggcactgtcagtgtgtttgtagatgac
atggggttagggaagacattgcagtgtattgggttgttgtggacattgtataaacagggt
ccctatggcggtaaaccaatcttacaacgaattcttatagtaacaccaagtagtttagtc
aagaattggtatcaagaattcaagaaatggttagggacggaacgtatttctgtatttact
gttgaagctgacaaaaaaatagaggaatatttgtcatgtcctaaatgtccagtgttgatc
atatcgtatgagatgttcctacgaaatgttaaggaactggaaaaagtgagttttgacttg
atcatctgtgatgagggccaccgccttaagaacacatctattaaaacatcagctttgcta
aacagtctccctgttcgcagacgtcttgttttgagtgggacaccggtgcagaatgactta
caagaattctttgccattgtagagttttgtaatccaggaatcttgggaacttcttcctcg
ttccacaaaatctatgaactgcctattattacatcacgacagccgacagcaagcaaagat
gacgtcaaccttggtatggaacgagcggccgaactgaatcggttgacaaaattattcctc
ttacgtcggtgtcaagatatcaacaacaaatatctccctccaaaagtcgagctggttgta
ttttgccgtccgtctagtcttcagttgactttgtacagacagattcttacctcgcagatg
attcgacggtttctggctggtcattatgatggtgcgtctcatttaattagtatagcagct
ctcaagaaactgtgtaatcatccagcattgctatatcagtcactggtgtcaaatgacagt
gatgaagacgaggaaggtagcgtctatcaaggtttagcagcattctacccacaaggttat
tctgtcaaagacaagttactggagcatggcagcaaactgaatgttctggccgcgatactc
agtggtgtatttgcaaccacacccagggaaaaagttgtactaattgccaatcatacgaag
acattggatttactgtctgatttctgtgaatctcaaggttacatttgttgtcgtcttgat
ggacaaacacccagcaacaatagattgaatatcgtgaaacaatttaacacacagaattcc
aaccattttatttttctattaagtttaaaagctggaggtgttggactgaacctagttggg
gcttcacgtctcattttatacgatattgattggaatcccgctaacgacattcaggcaatg
gcccgtgtctggagagacggtcagaagcggaaggtccatttatacagacttcttacaaca
ggaaccattgaagagaaaatctatcaacggcagataaataagcaaagccttagcggagca
gtaattgagtgccgtgagaagggaaaggtgaaattttcccttgaagaacttcgtgatctt
tttacactgaatgaacaaactcaatgtgatacacacgatctgttgaaatgtccctgtaga
actggtggacatgttgaggaaatccctaacaaactgaccccagttcgaccatgtcaactt
ggtgctgtcccagagactgatgtcatgggaaagaaaaatttaacaatggatgagttaatg
gactggaaacatttatctcctgatgaattttcctctcacttagaatggcatcttccttca
ggaccagcagaagagaattatgttacctttgcattttggagtgagaccaaaaatgtgttt
atcacagaagacaagagcgttctttaa
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