Octopus bimaculoides (California two-spot octopus): 106874492
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Entry
106874492 CDS
T04127
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03020
RNA polymerase
obi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106874492
09124 Replication and repair
03420 Nucleotide excision repair
106874492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obi03021
]
106874492
03400 DNA repair and recombination proteins [BR:
obi03400
]
106874492
Enzymes [BR:
obi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106874492
Transcription machinery [BR:
obi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106874492
DNA repair and recombination proteins [BR:
obi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106874492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
zf_C2HC_14
DUF5817
Motif
Other DBs
NCBI-GeneID:
106874492
NCBI-ProteinID:
XP_014777723
LinkDB
All DBs
Position
22:complement(22667130..22713610)
Genome browser
AA seq
1175 aa
AA seq
DB search
MYGQEEDPVLEEEDGEEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIV
EHSPAIDLQAEAQHTSGIIETPPRYVLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLT
YSAPLYVDITKTVIKEGEEPVETQHQKTFIGKIPIMLRSTYCLLNRLTDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFQQKDSKYAYKTEIRSCLEHSSRPTSTLWVNM
MARGGTGVKKSAIGQKIIAILPYIRQEIPIIIVFRALGFVSDRDILEHIIYDFDDPEMME
MVKPSLDEAFVIQEQNIALNFIGSRGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCET
KKAYFLGYMVHRLLLAACGRREVDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVRIYA
QKFIDRGKDFNLELAIKTRIITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL
SHLRRLNSPIGRDGKLARPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPS
PILEFLEEWSMENLEEVAPSAIQDATKIFVNGCWVGIHRDPEQLMNTLRKLRREMDIIVS
EVSMIRDIRDREIRIYTDAGRICRPLLIVENQKLLLKQSHIKQLKQREYNNYSWQDLVAS
GVVEYIDPLEEETVMLAMTPDDLQEKGMAYCSTYTHCEIHPAMVLGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHGLLYPQKPLVTTRSMEYLRFRELPAGINSI
VAIASYTGYNQEDSIILNASAVDRGYFRSFFFRSYKDQESKKGMDQEEIFEKPTRESVQG
MRHAIYDKLDDDGIIAPGTRVSGDDVLIGKTLTLPQNENELDSTVRRFAKRDASVFMRRS
ETGIIDQVMVTINQEGFKFCKIRVRTVKTPQIGDKFASRHGQKGTCGITYRQEDMPFTCE
GISPDLIVNPHAIPSRMTIGHLIECLQGKVAANKGEIGDASPFNDAVNVQKVSNLLQQYG
YHLRGNEILYNGHTGRKLNAQIFLGPTYYQRLKHMVDDKIHSRARGPLQIMNRQPMEGRS
RDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRVHVCNLCGLVCIANLRNQTFECRG
CKNKTQISQMRMPYACKLLFQELMSMSIAPRMMVS
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtacggacaggaagaagatcctgtactggaggaagaagatggagaggaaattacccca
gatctgtggcaagaagcttgctggatcgtcatcagttcatactttgatgaaaagggtttg
gtgaggcaacagctggattccttcgatgaattcattcagatgtctgtacagcgaattgtt
gagcattcccctgccattgatctgcaggctgaggcacagcatacatcaggcataatcgag
acacctccaaggtatgtcttaaaatttgaacagatctatttatctaaaccaactcattgg
gagaaagatggcgctccaagtcctatgatgccaaatgaagcaagattgagaaatttgact
tactcggcacctctctacgttgacatcacgaaaactgtcatcaaagaaggagaagaacca
gttgaaactcaacatcagaagaccttcattggtaaaatcccaattatgttacgctcgact
tactgccttctcaatcgtctcacagatcgtgatttgacagagttgaatgaatgtccactc
gacccaggtggatattttattattaacggatctgaaaaagttctcattgcacaagagaaa
atggctacaaacactgtgtatgtatttcaacagaaggattctaagtatgcttataaaaca
gaaatccggtcttgccttgaacactcctcccgtcccaccagtacactttgggtcaatatg
atggccagaggaggaactggtgtgaagaaaagtgccattggtcagaagattattgctatc
ttaccatatattcgtcaagaaattccaatcattattgtatttagagctcttggttttgtg
tctgaccgagacatcttggaacatatcatttatgattttgatgacccagaaatgatggaa
atggtaaaaccatcattagatgaagcttttgtgattcaagaacagaatattgctctgaat
ttcattggttcacgtggagctcgtcctggtgtcacaaaagagaaacgtatcaaatatgcc
cgagaaatcttgcagaaagaaatgttacctcatgttggtgttagtgatttctgtgagact
aagaaagcttactttttggggtacatggtacataggctgcttttagctgcttgtggtcgt
agagaagtagatgacagagatcactatggtaacaaaagattggatttagcaggaccacta
ttggcattcttgttcagaggtttgttccggaatctgatgaaagaggttcgcatttatgct
caaaagtttattgaccgaggaaaagatttcaatctggaacttgccattaagacgagaatc
atcacagacgggctgaaatattctttggccacaggcaattggggagatcagaagaaagcc
catcaagcaagggctggagtctctcaggtattaaatcggctcacattcgcttctacattg
tcccatcttcgtcgtttaaattccccaattggccgtgatggcaaactggctcgtcctcgg
caacttcacaatacgctgtggggtatgatctgtcctgctgaaactccagaaggtgcagct
gtaggacttgtgaagaacttggccttgatggcctatatttctgtcggctctcaaccctct
ccaatcttggagtttttagaagagtggagtatggagaatctagaagaggtagcaccatct
gctatccaagatgcaactaaaatctttgtaaatggatgctgggttggcatccatcgagat
cctgaacagttgatgaacacactaagaaaattaagaagagaaatggatatcattgtatct
gaggtatcaatgattcgagatattagagatagggagattcgaatatatactgatgctgga
cgtatatgtcggccgttactgattgtggagaaccagaagttgttgcttaaacagagtcac
atcaaacaactgaaacaaagagaatacaacaattacagttggcaagatcttgtagctagt
ggggttgtggaatatattgatcctcttgaagaggagacagtaatgttggctatgactcca
gatgatctccaagagaaaggaatggcgtactgttctacatatactcattgtgagattcac
cctgctatggtacttggagtttgtgcctcgattattccatttccagatcacaatcagtct
ccccgtaatacctatcaaagtgctatgggaaaacaagctatgggtgtttacatcacaaat
tttcacgtccgaatggacacccttgctcacggactgctgtatccccaaaaaccattggtt
acgactcgatccatggaatatcttcgctttagagagttacctgctggtattaattccata
gtagccattgcatcttatactggctacaatcaggaagattccattattttgaatgcatcg
gctgttgaccgtggttacttcaggtcatttttcttccgctcttacaaagatcaagaatca
aagaaaggaatggaccaagaagaaatatttgagaaaccaactcgagaatctgttcaagga
atgcgtcatgctatatatgacaaattagatgatgacggcatcatagctcctggtacaaga
gtctctggagatgatgtactgattggcaaaacactgacacttccacagaatgaaaacgag
cttgatagtactgttcgaagatttgccaaaagagatgccagtgtgttcatgagaagaagt
gaaactggtattattgaccaggtcatggtgacaatcaaccaggaaggtttcaagttttgt
aagatccgagtacggactgtgaaaaccccacagattggtgataaatttgccagtcgtcac
ggacagaaaggtacttgtggtatcacttacagacaggaggacatgccatttacctgtgaa
gggatatcacctgatttgattgttaaccctcacgccattccatctcgtatgacaattggc
catttaatcgagtgtcttcaaggtaaagtagctgccaacaaaggagagattggtgatgct
tccccattcaatgatgctgtcaatgtacagaaagtgtccaacctgctccaacagtatggt
taccatctgagaggcaacgagattttgtataacggacacactggaaggaagttgaatgcc
cagattttcttgggacccacctactaccagcgcttaaagcatatggtggatgacaaaatt
cattctcgggcccgtggtcctttacagattatgaacaggcaacctatggaaggaagatct
cgtgatggaggtttgcgttttggtgagatggagcgtgattgtcaaattgctcatggtgct
gcacaatttctgcgagagagactctttgaagtatccgacccatatcgagtgcatgtctgc
aacctgtgtggtttggtgtgtatagcgaatctgaggaaccaaacatttgagtgtcgtggc
tgcaagaataaaacacagatttcgcagatgaggatgccgtatgcctgcaaattgttgttc
caagagttaatgtctatgagtattgctccaagaatgatggtgtcctaa
DBGET
integrated database retrieval system
