Octopus bimaculoides (California two-spot octopus): 106874497
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Entry
106874497 CDS
T04127
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi04140
Autophagy - animal
obi04142
Lysosome biogenesis
obi04145
Phagocytosis
obi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
106874497
04142 Lysosome biogenesis
106874497
04140 Autophagy - animal
106874497
04148 Efferocytosis
106874497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obi04131
]
106874497
Membrane trafficking [BR:
obi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
106874497
Hops complex
106874497
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
Clathrin
TPR_1
VPS18_RING_C
ACBP4_C
Motif
Other DBs
NCBI-GeneID:
106874497
NCBI-ProteinID:
XP_052823980
LinkDB
All DBs
Position
5:complement(18899962..18953028)
Genome browser
AA seq
890 aa
AA seq
DB search
MSSILDQYEQESSRVAAPSTEDTLLLQLYIIIFFCRPHDRILSMTVCSRFLVIATCSNVI
IRVDMMHPHQQDEIELPKMIEDRIHKIFLDPTGRHLLISMEQSAEVYYLCRNSKKTKTIS
KLKGNLINAVGWNTQNTNDTLTGPILLGTTKGLIYETELTRGDDSRIFGRTVDRYVSKLF
TAGKEKVQPITGIEFDRMPSRPTDCKYYVLVTTPSRLYQFIGTVSTSAEAPIFQQLFQTY
LDTPEEFLELPYNFGTSELRIFNNSSKSRGKSFALMAGPGIYYGDINVQGAAGPNSVTVN
SKLMPYPFYFLNHFNYPVESNNKVVPLSIVLTEFHVLILFPDRMKAVCLLNEQLIYDDVF
PERVGKFIGLCKDPVSGNIWAYTSQHIYSYKVNQEYRDVWRIYLDQGKFDQAKEYCRDNR
MQLDEVLTKEADHLFSLKRYKESAVMYANTQSSFEEIALRFINLEDKEPLKAFLTQKLNS
LRVQDRTQMTMLVTWLTEIYLNQLGELKEQNDEKDSPYQNLQKEFCQFLNQSIIKECVCN
NRQVIYDLIASHGDVEDLMYFARLMKDFERVISHYIQHEYYKVALEVLNEQNQMELFYKF
SPVLMQHIPVETVKSWKKQRNKLDPKRLIPSLVQYDSKKHNEQGNQAIQYLKFCVEELDV
RDPPIHNYLLSLYARLQAGQLMVYLSSQGQDPDHVCYDLKYALRLCLELNHKEACVHIYS
VMGLYEEAVELALTINVDLAKEQASKPDEEDYELRKKLWLKIARHVVEEEKDVKRAMEFL
RECDLLKIEDILPFFHDFVIIDDFKDAIISSLEKYNEHIDSLKEEMDRATKSAEEIRREI
QSFRNKYSSFAELDEIIGAECIYCGDMMIKLIDKPFIEADEMDQAANGWL
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccattcttgatcagtatgagcaggaatcttccagagttgctgctccttcaaca
gaagatactttgctattgcaattatatattattatcttcttttgtagaccacatgataga
attttgtctatgactgtttgtagtaggttcttagtgattgctacttgcagcaatgttata
attcgagtggatatgatgcatcctcatcaacaagacgaaattgaactgccaaaaatgata
gaggatagaattcacaaaatattcctcgacccaactggccgtcatctactcatcagtatg
gaacaatcagctgaggtttattacttgtgtcgtaattctaaaaaaacaaagacaataagt
aaactaaagggaaaccttataaatgctgttggctggaacacccaaaatacaaatgatacc
ctcactggtcctatattgctgggtacaactaaaggactaatctatgaaactgaactaact
cgaggagatgacagtcggatatttggtcgaacagtggatcgctatgtttccaagttattt
actgctggaaaagaaaaggtacaaccaatcactggcatagaatttgatcgaatgccatcg
cgtcctacagattgcaaatactatgttcttgttacaactcctagtcgtctttatcaattt
attggaacagtttccacttcagctgaagctcctatattccaacagttatttcaaacttac
cttgataccccagaagaattcctggaactcccttataatttcggtacaagtgaactacgt
atatttaacaatagctcaaaatcacgaggcaaatcttttgccctgatggcaggacccgga
atctactatggtgatattaatgtccaaggtgctgctggcccaaactctgttactgtcaac
tctaaacttatgccatatcctttttatttcctgaaccatttcaattaccctgttgagagc
aacaataaagtcgtacctctttccattgttctcactgaatttcatgttcttatacttttt
cctgacaggatgaaagcagtgtgccttcttaatgagcaactgatttatgatgatgtattt
ccagagagggttggaaaattcattggactgtgtaaagatcctgtgtctggaaatatttgg
gcatacacttcccaacacatctatagttataaagttaaccaggagtacagggatgtctgg
cggatctatcttgaccaaggcaaatttgaccaagctaaagaatattgtcgagacaatagg
atgcaattagacgaagtattgactaaagaagcagaccatcttttttctttaaaaagatat
aaagaaagtgctgtcatgtacgctaacacacaaagttcttttgaggaaattgcattaagg
tttattaatcttgaagataaagaacctctaaaagctttccttacacagaaactgaacagt
cttagggtccaggaccgtactcagatgacaatgcttgtcacatggctgactgaaatttat
ttgaatcaacttggagaactcaaggaacaaaatgacgagaaagattccccgtaccaaaat
cttcaaaaagaattttgccaatttctaaaccaaagtattattaaagaatgtgtatgtaac
aaccggcaagttatttatgacctgattgctagccatggtgatgttgaagacttgatgtat
tttgccaggttaatgaaagattttgagagagtaataagtcattatattcaacatgagtac
tacaaagttgccctcgaggtactcaatgaacaaaatcaaatggagctcttctataaattt
tccccagttcttatgcagcatatccctgttgaaacagtcaagtcttggaagaaacaacgc
aataagcttgatcctaaaagattaattccatcactggtgcaatatgacagtaaaaaacac
aatgagcaaggaaatcaagccatacaatacttgaagttttgtgttgaagagctggatgta
agagaccctccaatacacaactatttgttatcactatatgctaggctacaagctggtcaa
ctcatggtttatctatcaagtcaagggcaggacccggatcatgtttgctatgatctcaaa
tatgctctcagactttgtttggagctgaatcataaggaagcatgtgtccatatatattct
gtgatgggattgtatgaagaagcagtggaattagctcttactataaatgttgatctagct
aaagagcaagcatcaaaaccagacgaagaagattatgaactacgaaagaagctgtggctg
aaaattgcccggcatgttgtagaagaagagaaagatgtgaagagagcaatggagtttctc
cgagaatgtgatttactgaaaatagaagacattttaccattttttcacgattttgttatt
attgatgacttcaaggatgctattatatcctctttggagaaatacaatgaacatattgat
tccctcaaagaagaaatggatagagcaaccaagagtgccgaagaaattcgtagagaaatt
cagagttttcgcaacaagtattcttcttttgctgaacttgatgaaataattggagcagaa
tgtatttactgtggagacatgatgatcaaattaatcgacaagccttttattgaagcagat
gaaatggaccaagcagcgaatggttggctatga
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