Octopus bimaculoides (California two-spot octopus): 106874512
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Entry
106874512 CDS
T04127
Name
(RefSeq) intermembrane lipid transfer protein VPS13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obi04131
]
106874512
Membrane trafficking [BR:
obi04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
106874512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
WWE
Flavoprotein
Motif
Other DBs
NCBI-GeneID:
106874512
NCBI-ProteinID:
XP_052830504
LinkDB
All DBs
Position
18:complement(19376530..19640545)
Genome browser
AA seq
3252 aa
AA seq
DB search
MVFESFVVELMNKFLGDYVENLDRSQLQLGIWGGDAVLKNLDLKESALDDLDLPVKIKVG
HIAKLTLKIPWKNLYEEPVVAELDGIYALAVPNIAIKYDEKKEEAFLQDQKQKKLKAVEE
AKKLEAEKDNPKEEKQDSFVEKLAAKIIKNLQVQISNIHVRYEDKYTNPAHPFAIGFTLE
DLIFQTTDKDWNPCVIKEAVTQIYKLIRLDSLSLYWNSRTELYDTLPRENSLKLLKENIA
SSKSTTEYTYMIKPICSVAHLRLHTKPEEDSFQIPKIFLTVIYDNIVLSLSKHQYDDILE
LLESFERMSISALYRKYRPDVPLQSSYSRWWKYAYECILEETVRRRRKMFSWAHIINHRT
IMKQYKEAYVKKLSQKSVASSVSKTIAESEKYLDIFCILLMRQQAEVEAAKLEVVKANQK
SKGWFGGWFSSETRSPEKQESKGIQDQFYELYTPEEKARLYDAIGYEENVNEGIFPKEYI
AVQLVTKLNCLAVVIKDDDKNHFDIMKLQLNEVFSSVSQRPSANAILVNTSMKQLTIFGS
PQNKLVPKMMNSKMTEGDSSPLLSVKIETNPLDGSCDTRVSVNAEPLQIIYDAVTVNALA
VFFKPPESVYLKQLSQAAMAKFNEVKQLSTTGLKHAIEQHKFTDICVYLKSSYVIVPESG
FNRKNARRLILDLGNLKVNSEKNTSDISVSQSTVEELLQSAYDKFNIQLDNIQMLLVKPG
EDWQSARKEGKSKMHILEPISINLLFQKCMFDNQVQLAKMKAFGELPLLSLSISDHKLQA
ILQLLQSIPFPESEPPPPEEDIFKGPSQLPSASANISTATLQSQPETKKSMVSRSSADYI
NLTDMELKFEIKEVRLKIAQTIKGKELPLLDFFVLTLGTNVVLRTFDMSVGAYLGGIYLQ
HQDFSSDPNGKVVNLIHTPSSDDTESKLLILEYLKANLDAPDFKIVYKNTEQSISVSFSM
LELLLDQTAIIDLMQFAQQLAPPEPSDSVEKSPGISQSVISEKSAAASQSLVSQTDKKAK
EAKKEPEKKPVAKKKGKLRDRGIIDIKVTAQLDTITVGISSPTQLITKIKVKGINADVSL
QVDKTTIGAELKDLVILNSDAQCYYPEILSIKGSEVLKCGIVAYNNGTKGDKFFNMSCVD
TSIDVTIGCMQFVFLNKYVNQLLGFLNQFQAAKEKISEAGEKMAEYSKETVASLQETASR
IGLCIKMKAPLILVPQHSKSPNILLVDLGNLDISNSFHSAEAKSADGKPAVIDKMSIQLT
SLKVSRAMLNEEKKICTEYLLLEPATLSINVNRNLSAGWYHGEPDMSIDGKQYALALCVS
QYDYAVIMAILNENFSEEQPVASADPSKDLSSLKSAESRTTPKATASKAHVEPETKVHTG
EIYTSMKFKFTLNSLSATLYMGKDEVSSEAGIVMKRDSKKCLGHFELQVFDIDFNMQSDG
SMKANIILNNTILDDSRPVKEYAIRRMIQRYSASPVSTPAQNMIEVQFQQNSKADKDVNV
KVCNLHICVCLDFLMTLGNFFTQGATKTATASESKRSVQDSKTSRTTVSAAPAAPERPTS
NMNINVSISHPEIVLIEDQCNSETNALVLHSNIDFKMVSTPDTATMSANVCGLQIVSSTF
KKRDNGIQILNTCEINFHSSAPFNEGQHIQLQTTNLVFSISPATIRTMTAIASGLSAQPA
EDDEKSDSKSLDNLWNVKPISECDLWYLKTDDKEAIESVNSTDVDTIVAARHEQLLMEIP
KLVIKLEGGVGQRTVPLLIVESAFQGEVKDWSSKMGVTSTLSLEVAYYNEKLAVWEPLLE
PVIQSHKRKRWDLTVEVAANDEGILIDEDNEPIIPPAKMTINVRSTEKLELTMSKTCLEV
LTNLGKAFGDAYKLVEPSATTSETLAPYIIENKTGLNLLLKLDNMFDMPANADSGRVRLA
HGGTLELTGREDSMESRRGSVIKATQEGVECKILFQVEQFGATREVVIKRAEKRGFHINH
QTFGGDTWTIVCDIVAAYGQKRITLQSIIQVHNHLSVPIDVFYQENNKSEKCGTVQSNDK
FHIPLSAVYTSSAEFYFSPNSSQYSSSEEPINWREVEDKGMYQIHCKSPNREESYFMNVC
PEIEEIHSEQQDKVGDAKMYTLHLWPTVIIHNLLPMTIRCLLENTSEDLELKVGENSPLF
NACIGTSKLEVRIPEYQGSQWIGSRTLEMNIPELSQWTFKSSNSDLVMDMGLHNKTGSGS
LAMTFYSPYWMINKTGQDLFYKVSEVNLSSCCFVGDKFQDPQSLVCLGPFFRKSSKKPAH
NTISPKISWRRGLNPEILKSRVHKEKEGKGWDKGDEKEKKEKDKKNPKVKEWRQHGKACL
QVAESEWSDKFSLDTVGSSGTVQCKNKASGIYEVGVNIRLSSSGLTKIVTFTPYHMMLNT
SELTYLVQEITPDPSSWIEIRPQQCIPFWPLTTKIELKAKVLDTNEETNVFSIIKPHSTL
LKLENNYGGINIDCQITETSFITTLTNYKSGMASVLLVNHTDRCSVQFSQKDVKTTHMLG
SEQAMLYTWENPSGNRELIWTCGTTKELKNNLTQDGIGEFFADNDTKVYWVSFLDGMQRV
LLFSQDLALVTIAQQAGELERIEQEINLFIFGLGLSLVNNYNQTEVAYLGITSSGVIWEE
KKKRFKALNLKSCAYLEDGYQKYLNELSLGNAAASSRKTLENKFEVDFKEMIMTKPNKRI
IRRSFQDGIWLQYKTSPHQLQLHAKINRLQLDNQISGAVFPTVLAPIPPPKSVAADSVPK
PFTEISIMQRKHEHSNVVQVKYFKVLIQEMSAKVDQNFLNAVLQLFSSDEIISNTEETRL
FLEDCKITQTELIDVAGVSLVEEQKNFYDYLHFSPIKIHLSFSLQGGGEDGPAEIKSNIL
NIFLQSVGVVLTDVQDVVFKLGYFERNHSFYNQSQLIGQMSQHYAGQAIKQMYVLVLGLD
VLGNPFGLLRGLGEGLEDLFYEPYQGAIQGPEEFAEGLALGVRSLFGHAVGGAAGAVSRI
TGAMGKGIAALTLDDEYQKKRREAMNKRPANVREGFARGGKGLVMGVVDGVTGIVRKPIE
GAQKEGVEGFFKGIGKGLVGAVTRPTSGVIDFASSSLDSIRRIAEMSDEIRRLRPPRRFH
NDLIIRPYNHQEAEGYAILQETEKGIYAATDEYIAHAVVTKDGKNVLLVTDKRLIFANRG
EIFGHWDCEWTHLYSELRETPKSHTKGIEIILKEKEKKKFFGSNLPKKVVMIQDQKVKEW
ILTKITEAMARA
NT seq
9759 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgaatcgtttgttgttgagttaatgaacaaatttctcggcgattatgtcgaa
aatctggatagatcgcagttacaacttggaatatggggcggtgatgctgttttaaagaac
ttggatctcaaagaaagtgctttggatgatcttgatttaccagtgaagataaaagttgga
catattgctaaactaacattaaaaataccttggaagaacttatatgaagaaccagttgta
gcagaattagatggcatctatgctttggcagtaccaaacattgccatcaaatatgatgag
aaaaaggaagaggctttcctgcaggatcagaaacagaaaaaactcaaagctgtcgaagaa
gcaaagaaattggaagcagaaaaagacaatcccaaagaagagaagcaagattcttttgtt
gaaaaattggcagctaaaattataaaaaatctgcaagttcaaattagcaatatccatgta
cgttatgaagacaaatataccaatccagctcatccatttgctattggatttactcttgaa
gatctaatctttcagaccacagataaagattggaatccatgtgttataaaagaagcagtc
acacaaatttataagcttatacggcttgattccctctctttatactggaatagcagaact
gagttatacgacacattgcctcgggaaaattccctgaaactattgaaagaaaatattgct
agttcaaaatctactacagagtatacatacatgatcaagcctatatgttctgtagcacac
ctgagattacacacaaaaccagaagaagactccttccagatacccaaaatctttctcact
gtaatatatgataatattgtgctctctttatctaaacatcagtatgatgatatcctggaa
ttgctggaatcatttgaacgaatgtcaatttctgcattgtatcgcaaatatcgaccagat
gttcccctccagtctagttactccagatggtggaaatatgcttatgaatgcattttggag
gaaactgttcgacgtcgaagaaagatgttttcctgggctcacataataaatcacagaact
ataatgaaacaatacaaggaagcttacgttaagaaactctctcagaaatcagttgcatca
agcgtttcaaaaactattgcggaatcggaaaaatatctggatatcttttgtatccttctg
atgagacaacaagcagaagtagaggctgccaaactagaagttgtcaaagccaaccagaag
agtaaagggtggtttggaggctggtttagctctgaaacaagaagtccagaaaagcaagag
agcaaaggaatacaggatcagttctatgaattgtacacacctgaagaaaaggcccgtctc
tatgatgccattggttatgaagaaaatgtgaatgaaggcattttcccaaaggagtatatt
gctgtccaattggtcaccaagttgaactgcctagccgttgttatcaaagatgatgacaaa
aatcactttgatattatgaagctgcagctgaatgaagtgttttcatctgtatcccagagg
ccatctgctaatgccattttagtcaatacttctatgaagcaattgacaatatttgggtca
ccacaaaacaaactcgtcccaaaaatgatgaactcaaagatgactgaaggtgattcatct
cctctgttgtctgtcaaaattgaaaccaatcctcttgacggtagctgtgatactagagtt
agtgtgaatgctgagcctctacagataatctatgatgctgtaactgtcaatgccttggct
gtatttttcaaaccacccgaatcagtctatttgaaacagttgtcacaagcagcaatggct
aaatttaatgaggtgaaacagctatctaccactggactaaaacatgcaattgagcaacac
aaattcactgacatttgtgtttatttgaagtcttcttatgtaatcgttcctgaaagtggc
ttcaatcgaaaaaatgctcgtcgacttatcctagaccttggtaacttgaaagtaaacagt
gaaaaaaacacctcagatatcagtgtatcacagtcaacagttgaagaattgctccagtca
gcctacgacaagttcaatattcaacttgacaatattcaaatgttacttgttaagccagga
gaggattggcaatctgccagaaaagaaggaaaatcaaaaatgcacatcttggaacctatt
tctatcaacttgctatttcaaaaatgcatgtttgataatcaagtacaacttgctaaaatg
aaagcctttggagagctgccattactgagtctgagtatctctgaccacaaactacaagca
attcttcaactccttcagagtattccttttcctgaatctgaacctccacctccagaagaa
gacatttttaagggccccagtcaactaccatctgcaagtgcaaacatttcgacagcaact
ttacaatcacaaccagaaactaaaaagtctatggtttcaagatcctctgcagactatatc
aaccttactgatatggaactgaaatttgaaatcaaagaggtccgactaaagattgcacag
acaataaagggcaaagaacttcctctactagacttctttgtcttaactcttggtactaat
gttgttctgagaacatttgacatgtcagtcggtgcttacctaggtggaatttaccttcag
catcaggatttctcctctgatccaaatggaaaagttgtcaatctaattcacactccaagc
tctgatgatacagagagcaagttgttaatattagagtatcttaaggctaaccttgatgct
cctgacttcaaaatagtatacaagaacactgaacaatcaatatcagtctctttctccatg
ctagaactactacttgaccaaactgcaataattgacctcatgcaatttgctcaacaacta
gcaccaccagaacccagtgactctgtagaaaaatctcctgggatttcacaatctgtgatt
tcagaaaaatcagctgcagcttcgcaatctcttgtttctcaaactgataaaaaggcaaaa
gaagctaaaaaagaacctgaaaagaagcctgttgccaagaaaaagggaaaattacgagac
agaggaatcatcgacatcaaagttacagctcaacttgatacaattactgttggcatttcc
tcaccaactcaacttatcactaagatcaaggtgaaaggtataaatgctgatgtcagtctt
caagttgacaaaacaaccatcggagctgaactgaaggatctcgttatcttaaactcagat
gctcaatgctattaccctgaaattttatcaatcaaaggctctgaagtactgaaatgtgga
attgtggcttataataatgggacaaaaggtgacaaattctttaacatgtcttgcgttgat
actagcattgatgtcacgataggatgtatgcaatttgtcttccttaacaagtatgttaat
cagctattgggtttcttaaaccaattccaagcagctaaagaaaaaatttctgaagctgga
gagaaaatggctgaatattccaaagaaactgtggccagcttacaagaaactgccagtcga
attggtctatgcatcaaaatgaaagcacctcttattcttgttccgcaacactcaaagtct
cccaacatcttattggtcgatctcggtaacttggacatcagcaatagtttccattcagct
gaggccaaatcagcagatggcaaacccgctgttattgacaaaatgagtattcaactcact
tctctgaaggtgtcaagagctatgttgaatgaagaaaagaaaatatgcacagaatatctt
ttattagagcctgctacattaagtataaatgttaacaggaacctgtctgctggctggtac
catggggaaccagatatgagtattgatggcaaacaatatgctttagctctttgcgttagc
cagtatgactatgctgtaattatggcaatattaaatgaaaacttttcagaagagcagcca
gttgcttcagctgatccttcaaaagacttgtcttcattgaagagtgctgaatccagaact
acacctaaggctactgcttcaaaggcacatgttgaaccagaaactaaagtgcataccggg
gaaatttatacctctatgaagttcaagtttacactaaacagcttatcagcaacactttac
atgggaaaagatgaagtgtcaagcgaagctggaatagtgatgaaacgagacagcaagaag
tgtctgggacattttgagttacaggtgtttgacatagactttaatatgcagtcagatggc
tcgatgaaagcaaatattattttgaataacaccattttagatgacagtcgtcctgtaaaa
gaatatgcaataagaagaatgattcaaagatactctgcaagtccagtatcaacaccagca
caaaatatgattgaagtgcagtttcagcaaaattccaaagcagacaaagatgtcaacgtc
aaagtgtgcaacttgcacatatgcgtttgtttagactttctgatgactttaggaaacttc
ttcactcaaggagcaacaaaaacagcaactgcttctgaatccaaacgttcagtacaagat
tcaaaaacttcaaggactacagtgtctgcagctcctgcagctcctgaaagacccacatca
aatatgaacattaatgtttcaatatcacatcctgaaattgttctcatagaagatcaatgc
aactctgaaactaatgcattggtgctccattcaaatattgattttaaaatggtgtccact
cctgataccgctacaatgtcagctaatgtctgtggccttcagattgtatcatcaaccttc
aagaagagagataatggcattcagattcttaacacctgtgaaattaactttcatagcagt
gctccatttaacgaaggccagcatatacaacttcaaacaactaatcttgttttcagtata
tctcctgcaactatacggacaatgactgctattgcttctggtctttctgcacaacctgct
gaagacgatgaaaaatctgacagcaaatcacttgataatctctggaatgttaaacccatt
tcagaatgtgatttatggtatctcaaaactgatgacaaagaagctattgaaagtgttaat
agcacagatgttgatacaattgttgctgctagacatgaacaactattgatggagattcca
aaattagtcattaagctagaaggaggtgttggtcaaagaacagttccattgcttattgta
gaatctgcttttcaaggtgaagttaaagattggagtagtaagatgggtgttacaagtaca
ctcagtttagaagttgcttactataatgaaaaactagcagtatgggaacctcttttagaa
ccagttatccagagccacaagagaaagaggtgggatttaactgttgaggttgctgccaat
gatgagggtattcttattgatgaagataatgaacctatcatacctccagctaagatgacc
atcaatgttcgttcaacagaaaaacttgaattgacaatgagtaaaacatgtctagaagta
ctcactaaccttggcaaggcatttggagatgcttacaaactggttgaaccaagtgcaaca
acatctgaaaccttggcgccttacatcattgagaacaaaacaggcttaaacttgttactg
aaacttgacaatatgtttgacatgcctgcaaatgcagatagtggcagagtccgtcttgcg
cacggaggcactttagagctcaccgggcgtgaagattcaatggagtctagaagagggtcg
gtaatcaaagcaacacaagaaggagtggaatgtaaaatattattccaggtggaacaattt
ggagctacaagagaagtagtcatcaaacgtgcagagaaacgaggatttcatattaatcat
cagacatttggtggtgatacatggacaattgtttgtgatatagttgcagcttatggacaa
aaacgtatcacattacaatctataatacaggttcataaccatttgtcagtccctattgat
gtcttctatcaagaaaataacaaatcagaaaaatgtggaacagttcagagcaatgataaa
ttccatataccattgtctgcagtttataccagttcagctgaattctatttcagtcccaac
agcagccagtattcttcctctgaagaaccaatcaattggagagaggttgaagacaaagga
atgtatcaaatccactgcaaatcaccaaaccgtgaagaatcttatttcatgaatgtttgt
cccgaaattgaagaaattcattcggagcaacaagacaaggtgggcgatgctaaaatgtat
acattgcatctttggcctactgttattattcacaacttgttgcccatgaccattcgctgt
ttacttgagaataccagtgaagatctggagttgaaagttggtgagaacagtccacttttc
aatgcttgtattggaacatctaaactggaagtgagaattcctgaatatcaaggctctcaa
tggattgggtctcgtactcttgaaatgaatatacctgaattatcccagtggacattcaaa
tcttctaacagtgatttggttatggacatgggtttgcataacaaaactggcagtggcagc
cttgcaatgacattctacagcccttattggatgataaataaaactggacaggatctattc
tacaaagtatctgaggtaaacctttccagttgctgttttgttggtgataaattccaagat
cctcaatcattggtatgtttagggcctttcttcaggaaatcttcaaagaagccagctcac
aacactatttctccaaagatttcctggagaagaggtctcaaccctgaaatactgaaaagc
agggtacacaaggaaaaagaaggaaaaggttgggataaaggggacgagaaagagaaaaaa
gagaaggacaaaaaaaatcccaaagtgaaggagtggcgccaacatggtaaagcttgtctc
caagttgcagaatctgaatggtctgacaagttttcactggacactgtcggaagctctggt
accgttcagtgcaagaacaaagcttctggaatctatgaagttggtgttaacatccgttta
tcttcctctggtttaacaaaaatcgtaaccttcaccccataccacatgatgctaaatact
tcagagctaacatatttagttcaagaaataactcctgatccatctagctggattgaaatc
cgtccacaacaatgtataccattctggcctctgacaacaaagatcgaattgaaagccaaa
gttctagatacaaatgaagagaccaatgtcttctccataatcaaacctcattcaactctt
cttaaattggaaaacaattatggaggaatcaacattgattgccaaataacagaaacttcc
tttattacaacactgaccaactacaaatctggtatggcctctgttcttttggtgaaccac
accgataggtgttcagtccagtttagccagaaagatgtgaaaaccacccatatgctagga
tcagaacaagccatgctatatacctgggaaaatccttcaggaaacagagaactcatctgg
acatgtggaactaccaaagaattaaagaataatctcactcaggatggaattggagaattc
tttgcagacaatgacaccaaagtgtattgggtgtctttcttggatggaatgcaacgtgta
ttattattcagtcaagatttagctctggttacaattgctcaacaggctggtgaacttgag
cgaattgaacaagaaatcaacttgtttatatttggattaggattgtctttggtaaataat
tacaaccaaacagaagtggcctatctaggtatcaccagttctggtgtcatttgggaggaa
aagaaaaaacggttcaaagccttgaatttgaagtcatgcgcctacttggaagatggttac
caaaaatatctcaacgaactttctctaggtaatgcagcagcttcatcccgcaagacttta
gaaaataaatttgaagttgatttcaaagaaatgattatgactaaaccgaacaaacgcatc
attagacgaagcttccaggatggaatctggttacaatataaaacttcacctcatcaacta
cagttgcatgctaaaattaatcgtctccagttggataaccaaatcagtggagcagttttt
ccaactgttttggcaccaattccacctccaaaatctgtagcagctgatagtgttcctaaa
cctttcacagaaatcagtattatgcaacgaaaacatgaacacagcaatgttgttcaagtc
aaatactttaaggtgctaattcaagagatgtctgcaaaagtggaccagaactttttgaat
gctgttcttcaactattctcatctgatgaaatcatttcaaacactgaagagacccgtctg
ttccttgaagactgtaagataacccagacagaacttattgatgtggctggtgtgtctctt
gttgaagaacaaaagaacttctatgactacttacacttctcacctatcaagattcatttg
agtttctctctgcaaggtggtggagaagatggtccagcagaaattaaatccaacattctc
aatattttcctccagagtgttggtgttgtactaactgatgttcaggatgtcgttttcaaa
cttgggtattttgaaagaaatcacagtttttataaccaaagtcaattaattggtcagatg
agtcaacactatgctggacaggcaattaaacaaatgtatgtgttggtactcggcttagat
gtcttaggcaacccatttggactgttacgaggcctaggagaaggtttagaagatctcttc
tatgagccatatcagggtgccattcaaggaccagaggaattcgctgaaggacttgctctt
ggagtccgcagtttatttggtcatgctgttggtggtgctgcgggtgctgtgtcaagaatc
actggagctatgggaaaaggtattgctgccctcactttagatgatgaatatcagaagaaa
cgaagagaagctatgaataaacgccctgccaatgtccgagaaggttttgcccgtggagga
aaaggacttgttatgggtgtagtcgatggtgttactggtattgtacgaaaacccattgaa
ggtgcccaaaaggaaggtgttgaaggtttcttcaagggtattggtaaaggtttagttggt
gccgtaacacgcccgacaagtggagtgattgactttgctagtagctcccttgacagtata
cgcagaattgctgaaatgtcagatgagatccgccgtttgcgcccaccacgtcgattccat
aatgacttgataatccggccatacaatcatcaagaagctgaaggctatgcaattttacaa
gaaactgagaaaggaatttatgctgccactgatgaatatattgctcatgctgttgtaact
aaagatggaaaaaatgttcttttagtgacagataaacgtctcatatttgctaaccgtggt
gaaatctttggccactgggactgtgagtggacacacctttatagtgaacttagagagact
ccaaaatctcatacaaaaggaatagagatcatcctgaaagagaaggagaaaaagaaattc
tttggcagcaatctgccgaaaaaggttgtgatgatacaagatcaaaaagtgaaagagtgg
attctcaccaagatcactgaagccatggcccgtgcttaa
DBGET
integrated database retrieval system
