Octopus bimaculoides (California two-spot octopus): 106874615
Help
Entry
106874615 CDS
T04127
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
106874615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
obi04515
]
106874615
Cell adhesion molecules [BR:
obi04515
]
Immunoglobulin superfamily
DCC/UNC5 family
106874615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Neogenin_C
Ig_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
ig
V-set
Interfer-bind
Ig_4
fn3_4
Sp38
V-set_CD47
Herpes_gE_N
Insulin_TMD
TMEM154
Motif
Other DBs
NCBI-GeneID:
106874615
NCBI-ProteinID:
XP_052826380
LinkDB
All DBs
Position
9:14431924..14737035
Genome browser
AA seq
1578 aa
AA seq
DB search
MAKIGLKLLPESRRTVSGSFFSVTLTFIWTIGFLTLTVKGSSVHFRKFHFTVEPSDVVTN
RGEDVQLHCNAQHGYNKTNIFWKKDNELLNTRQQLKNGSLYIQNVQHSKSNVGDVGEYQC
FAEVPSIGTIISKPAHVQIAHMAKMFSITPETLEVYLGDIAMFQCSIDGIPQPKYSWYKN
NVLLKRSNHIKMYTDGFLEITNVRAIDLGKYYCEARNMNTSRRSRPAVLQENTDLESIRK
GVAPSFVMKPQDAEVIRGSLLVLHCGANGIDRNDGSPKITWLKGGVELDNSNKTYKIVGT
GSLVIPNVQENNNGIYTCRASNMEDSIDAPASVNVLSPPKFKTKPMNAVAQVNSEQMFEC
DIYGVPPPKIYWMKDGKMIETDDYFKIVDHKNLRILGLLKEDEGMYQCFGKNYLGSIQAS
AQLVVRPHTDDSHPLTPTLTHSPTIPLGLQNLNTDSLPSVPVDLHEVIRAPSFVTLSWKP
PTHTGPKDAKIISYSVFWKEKERESHKTRRRKGEIRERVMNTTSLEATIQHLKPNTVYEF
RVQAYNSHGPGKAVVIEVESEEEVRVPSPPRNAIAEAVSPTSIRVKYEPPEEPNGKIKSY
KIIYYEVGANKEAAIEVRGLEYVLTNLKQFRDYSFRVEAHNENGAGMSTEEFVAKTKADI
PSDSPTNFTLEATSSTSIIVRWEPPPKDHQNGPIVGYKIRFKKKGSRRGKTVTTASNVKF
QPLTDLEKGAEYSVRIAALSTLGIGPFTDWLFTKTYDDDLDESHVPGKPSKVRTAAEANS
ILVRWAPPVDSSKTLVRGYTVTYGKGIPDVMRVKLGPQQRVYKIKNLQPASSYVIKVMAT
NKIGDGPPIYAHVKTDKESEIDLATPMIPPVGLKTIVLSSQTIVLTWTDSTLSRAQRITD
NRYYTVRYSPVYNKKKYRYINSTDLNAHIDHLKPNTQYEFSVKVTKNLRKSTWSMSVVNT
TQESAPGGIPRDLTPAPVEGNPLSITLSWQPPPRPNGQLTGYLIFYTTDSHQDDRDWVVH
NVDGDKLSSTIKDLTPDTTYFYKMQARNNKGYGPMSPTVVYRTSKADGTGGGLVQVPDLP
PDIQQFDFKYKPGRSFLPPDPNEPRGVNKEPNEDENDDSVPTNVMIIIIACVIGVTFCIA
VVAVAIVICKKKEYRNKRSSGTYASPAKGKTPKAPTTKDVKPPDLWIHHDQMEMKNLDKS
ENRESSAPTPAPSQRCGESSKCEDSSLMDMEKRRNSLVGDPSYLSPAPDERYPRSIIRPK
PIMISVDPTQPMSRDPPVSTVTAVPNGHFPGAESPQSQVAVRPVYPRTQYNTQYSTPPRV
HAGDVSQTTSSLQVRAVPQQNTRGCCTPVQSPESFLPPSLRMGGEHVPCMVSHEYAVLQP
EPRFTDINTTSTNTATSPAAYANTITTTAAANNNNSTTTTITTTTTTTTSAATLPLPNTA
VSVTDSNNGFVVPGAGLTQRHPLVSNLNSLKAVSAPGVSLSANQGTGAAAAVPKHLVKPQ
QSSSPYKRPNPPVSSGPIKPRSPMPIVTPKAPDVTLKSGKEESEMQKSLSTEELTAEMAN
LEGLMKDLNAITQQEFEC
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaatcggattgaaacttctaccagaaagcagacggacagtcagtgggtccttt
ttttcggtgaccttaacttttatttggacaatcggattccttactttaaccgttaaaggg
tcttctgttcacttcagaaagttccatttcactgttgagccaagtgatgtggtcaccaat
cgaggtgaagatgtacagttacactgtaatgcccagcacggatataataaaacaaatatc
ttttggaaaaaagacaacgaactcttaaatacgagacagcaactgaaaaatggctccttg
tatatacaaaacgtccaacacagcaagtccaatgttggtgatgttggtgaataccaatgt
tttgctgaagtgcctagcattggaacgattatcagcaaaccggctcatgtacaaattgcg
catatggccaagatgttctcaatcacacccgagacgctcgaggtttacctgggtgacata
gccatgttccaatgctccattgacggtattcctcaaccaaaatactcctggtacaagaac
aatgtcctattgaaacggtccaatcacataaaaatgtatacagatggatttctagaaatt
acaaatgtgcgagcaatagatcttggaaaatattattgtgaggccagaaacatgaataca
agtcgtcgtagtagaccagctgttttgcaagaaaacacggatttagaaagcatccgtaaa
ggcgtggcaccttcgtttgtaatgaagccacaagatgctgaagtgatccgaggttcatta
ttggtgttacactgtggagcaaatggtattgatagaaatgatggaagtccaaagatcaca
tggcttaaaggaggtgttgaattagacaattccaacaaaacatacaaaattgtcggtaca
ggcagcttagtaattcccaacgttcaagagaacaacaatggcatttacacttgccgtgca
agcaatatggaggactctatagatgccccagcttcagtaaatgtcctcagtccccccaaa
ttcaagacaaaaccaatgaatgctgtagcccaagtgaactcagaacaaatgtttgaatgt
gatatatacggtgtgccgccaccaaaaatctattggatgaaggatggtaaaatgattgag
actgatgactacttcaaaatagttgatcacaagaacctgcgtatactgggtctgctgaag
gaggatgaaggaatgtaccaatgttttggcaagaactatctcggtagtattcaggccagt
gctcagctggtagtgaggccacatacagacgattcccatcccttgaccccaacactgacc
cactcaccaaccatccctctaggcctgcagaacttgaacaccgatagcttgccgtctgtg
ccagtcgacctacacgaggtgatccgggccccgagctttgtcacgctgtcatggaaacca
cccacccacacaggaccgaaggatgccaaaatcatcagttactctgtcttctggaaagaa
aaagaacgcgaaagtcataaaacgcgaaggcggaaaggagaaataagggaacgagttatg
aatacaaccagtttggaagcaacgatccaacacctaaagccgaatacagtttatgagttc
cgagttcaagcatacaactctcatggccctggaaaggccgttgttattgaagttgaatct
gaagaagaagtgcgtgtgccaagtcctccacgaaatgccattgctgaagcagtgtcccct
acatcgataagggtgaaatacgaaccaccagaagagcctaacggaaagattaagtcctat
aaaatcatctactacgaagtcggagccaacaaagaagccgcgatagaagtacgaggcctg
gagtacgtgttgacaaacttgaaacagtttcgtgactacagcttcagggtagaagctcac
aatgagaatggtgcagggatgagtacagaggaatttgttgccaaaaccaaagcagatatt
ccttctgattctccgacaaacttcactctggaagcaacaagctcaacgagcatcatagtc
cgttgggaacccccgccgaaagatcaccagaatggtccaatagtcggttacaagatacgc
tttaaaaagaaaggcagccgccgcggtaaaactgtcaccacagcaagtaatgtgaagttc
caaccactgactgatctggaaaaaggcgccgaatattcagttcgtatagctgcactctca
acccttggcatcggtccattcacagactggcttttcacaaaaacgtatgatgatgatctt
gatgaatctcatgttcctggaaaaccttctaaagttcgaaccgctgctgaagccaactca
atcttggtgcgatgggctccacctgttgacagcagcaagacattagtaaggggttacact
gttacctacggcaagggtataccagacgttatgcgagtcaaacttggccctcaacaacgt
gtttataaaatcaaaaaccttcaaccagcttcttcgtatgttattaaagtcatggccacc
aacaagatcggtgacggtccaccaatatatgcccatgtgaagacagataaagagtcagag
attgatctcgctactccaatgatacctccagtcggattgaagacaattgttctatcatct
caaactattgtactcacgtggactgactcgaccttgagtcgtgctcagcgcatcacggat
aaccgttactacacggtacgctactcacctgtctataacaagaagaagtatcgctacatc
aattcaacagacctcaatgcacacatagaccacctgaaaccaaatactcagtacgagttc
tcagtgaaagttaccaaaaaccttcgtaaaagtacttggagcatgagtgtcgtcaacaca
actcaagaatcagctcctggaggtataccccgagatttaaccccagctccagtggagggt
aacccactgtcgattacattaagttggcaaccacctccacgaccaaacggtcaactaaca
ggctatttaattttctacaccaccgattcccaccaagacgaccgagattgggttgtgcac
aatgtcgatggagacaaactgtcctccacaatcaaagacctcaccccagacacaacttat
ttttacaaaatgcaagctcgcaacaataagggatatggtccaatgtcccctactgttgtg
tacagaacatcaaaagctgatggtactggtgggggtttggtacaagtcccagacttgcct
ccggatattcagcaatttgacttcaagtataaaccaggccgcagttttttacctcccgac
ccaaatgagccaagaggtgttaacaaagaaccaaatgaagatgaaaatgatgattctgtt
cctaccaatgttatgattattattattgcctgtgttatcggggtgacgttctgcattgcc
gttgtggctgttgcaatcgtcatctgcaagaagaaggaatacagaaacaaacggagttct
gggacttacgcatctcctgctaaaggcaagacgccaaaagcacctactacaaaagatgta
aagccaccagacctctggatccatcatgatcaaatggaaatgaagaacttggataagtca
gaaaacagagaatcatccgcacctactccagctccctcccagagatgtggggagagctcc
aaatgtgaagattcatccctgatggatatggagaaacgcagaaattcattagtgggagac
ccgagttatctatcaccagcccctgatgaaaggtatcctcgtagcatcatccgtccaaaa
cctattatgatttctgtggacccaacacaaccaatgtctcgagatccgccagtctccacg
gtgactgccgtccccaatgggcattttcccggcgctgaaagtcctcaatcacaagtggct
gtacgtcctgtctaccccagaacacagtacaacacacaatattctactccacccagagtt
catgcaggagatgtgtctcagaccacttccagcctgcaagtaagagctgttcctcaacaa
aacactcgaggttgttgcacacctgttcagtcacctgagtctttcttacctccatcccta
cggatgggcggagagcacgtgccctgtatggtctcccatgagtacgctgtacttcagcct
gagcctcgttttactgatatcaacaccacttctactaacactgccactagtccagctgct
tatgccaataccatcaccaccactgctgctgccaacaacaataacagtactaccactact
atcaccaccacaactaccactactacttctgctgctacccttcctttgcccaacacagca
gtctctgtcactgacagcaataacgggtttgttgttcctggagcaggcctcacccagcga
catccgctggtatcaaacctcaactcactgaaagctgtctcagctccaggagtttccctg
tcagcaaaccaaggcacaggtgcagcagcagcagtgcctaaacatttagtgaagcctcaa
caaagttctagcccttataaaagacccaaccctccagtatcaagtggccctataaaaccc
cgctcaccaatgccaatagtaacacctaaggccccagatgttactctaaaatcaggaaaa
gaagagtctgaaatgcagaaatctttaagtaccgaggaattaacagcagagatggcaaat
ttggagggcctgatgaaagatttaaatgccataacccaacaggaattcgaatgctga
DBGET
integrated database retrieval system
