Octopus bimaculoides (California two-spot octopus): 106874737
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Entry
106874737 CDS
T04127
Name
(RefSeq) pseudouridylate synthase 1 homolog
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
obi03016
]
106874737
Enzymes [BR:
obi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
106874737
Transfer RNA biogenesis [BR:
obi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106874737
Prokaryotic type
106874737
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
106874737
NCBI-ProteinID:
XP_052828822
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All DBs
Position
14:51026301..51061570
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AA seq
341 aa
AA seq
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MAYSGEGYYGIQVNSAFPTIESELFKALVAVGLVPQDHVDNPYKMSFQRAARTDKGVSAV
GQVVSLKMLINVDNLIDRLNETLPTQIRILGMLRTTNSFNSKNHCSHRTYIYVMPTFALT
PVEENVVLDYRIDESKLDELNSVLSLFKGTHNFHNFTSGRKFSDPSANRYIMDFKAGKPV
VIDGLELVTIRIQGQSFMLHHIRKMIGLSIAIVRGFCGKDVIDLAWKAEKVDVPKAPGLG
LVLERLHYNGYNKRFGNDGIHEPLVWDKYDEQMENFKEEFIMKNIVEKEKEDKSLFNWLP
CLHHHYYKAHVGPIAGKSSLHHAMRKLYKLEKAKLDVAQPA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcatactctggagagggttactatggcatccaagttaattccgctttcccaacaatc
gagagtgaactgttcaaagcactggttgctgtcggactcgtgccacaagaccatgtagac
aacccatataagatgtctttccaaagagctgctcgtacagataaaggtgtgtctgctgtt
ggacaagttgtttcactgaagatgttgataaatgtggataatttgattgatcgactcaat
gagacacttccaacacagatcagaatcttgggcatgctgcgtacgacaaattctttcaac
agtaagaaccattgttcacatcgtacatacatttatgtgatgccaacgtttgcactgact
cctgtagaagagaatgttgttttagattacagaatagatgaaagcaaattggatgagctg
aacagcgttttaagtttgtttaagggaacacataatttccataatttcacctctggacgg
aaattctctgacccaagtgccaaccgttacattatggattttaaggcaggaaaaccagtg
gtcatcgatggtctagagctggtcactatcaggattcaaggccaaagttttatgctgcat
cacattcgtaaaatgatcggtttatcaatagccattgttcgaggattttgtgggaaggat
gtcattgatcttgcatggaaggctgagaaagttgatgttcccaaagcaccaggattgggc
cttgttctagaaaggttgcattataatggttacaataaacggtttggcaatgatggcatc
catgaacctttagtatgggataaatatgatgagcaaatggagaactttaaagaagaattt
atcatgaaaaacatcgttgagaaggagaaagaagacaaatccctcttcaactggctgcct
tgcctccatcatcactactacaaggctcatgttggccccattgctgggaagtcgtcactc
caccatgcgatgcggaaactgtataagttagagaaagcaaagttagacgttgcacaacca
gcatga
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