KEGG   Octopus bimaculoides (California two-spot octopus): 106875096
Entry
106875096         CDS       T04127                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106875096
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:obi03041]
    106875096
   03036 Chromosome and associated proteins [BR:obi03036]
    106875096
Spliceosome [BR:obi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    106875096
 Complex B
    106875096
 Complex C
   U2 SnRNP specific factors
    106875096
Chromosome and associated proteins [BR:obi03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    106875096
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_ECM29 HEAT_EF3_N Htt_N-HEAT_1 XMAP215_CLASP_TOG HEAT_2 Vac14_Fab1_bd HEAT UNC45-central DUF2298
Other DBs
NCBI-GeneID: 106875096
NCBI-ProteinID: XP_052827347
LinkDB
Position
10:complement(94305335..94345185)
AA seq 1357 aa
MEGFTREDIEEQVRTIQQKKNTLFQDNGERVGLGAEGHFDTDIYGSSSSKFEGYVTSIAP
NEDQDDEEEEPSYSKKSSFTAPLNLLNDTLNDKNYDPLADNRPARIADREDDYRAIRRQM
IISPERYDPFAEGGKTPDPKLNKRTFSDVMVEQRLTHQQAALRQQLVEKAKSGELHAVNG
SSGDSSSTSASVAAAAAAAAAAVAQKQPVKRRRWDQATDDSTPAKKTSSSSWDAAEATAN
TPSSTRWDETPGRSKGGETPSATPGASTRAWEATPGHATPGAATPGRDTPGHQATPSARR
NRWDETPKTERETPGHGSGWAETPRTDRGGDLIQDTPTPGASKRRSRWDETPAAATPGGM
TPGSMTPNMTPGGTTPGGMTPTNMTPSGMTPSGMTPGNMTPGGMTPGGTTPTGQKAMAMA
TPTPGHLMSMTPEQLQAYTWQRELDERNRPLSDEELDSMFPTGYKILQPPAGYVPIRTPA
RKLTATPTPMAGTPMGFRMQTPDSKVSIVDMQPKGNLPMMKPDDMQYFDKLLVDVDEETL
TPKEQKERKIMKLLLKIKNGTPPMRKAALRQITDKARDFGAGPLFNQILPLLMSPTLEDQ
ERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLA
TMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKI
VQQIAILMGCAILPHLKSLVEIIEHGLIDEQQKVRTITALALAALAEAATPYGIESFDSV
LKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKI
VLKVVKQCCATDGVEPQYIKEEILPPFFKHFWNQRMALDRRNYRQLVDTTVEIANKVGAA
EIIVRIVDDLKDEAEQYRKMVMETIEKVMGNLGAADIDSRLEEQLIDGILYAFQEQTTED
VVMLNGFGTVVNALGKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQE
EKLMGHLGVVLYEYLGEEYPEVLGSILGALKGIVNVIGMTKMTPPIKDLLPRLTPILKNR
QEKVQENCIDLVGRIADRGAEFVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKA
IGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQIGV
LKSLSFMFQYIGEMAKDYIYAVTSLLEDALMDRDLVHRQTAMAAIQHLSLGVYGFGCEDA
LNHLMNYVWPNIFETSPHVVQAFMGAIEGLRVGLGSARILQYALQGLFHPARKVRDVYWK
VYNTVYIGAQDGMIPAYPRIPNDVKNQYIRYELDYML
NT seq 4074 nt   +upstreamnt  +downstreamnt
atggagggatttactcgggaagatattgaagaacaagttcgaactattcaacagaaaaag
aatacattgtttcaagataatggagaacgtgttggtcttggtgctgaaggccattttgac
acggatatctatggatcttcttcaagtaaatttgaaggttatgttacatccattgctcca
aatgaagatcaagatgacgaggaagaggagccatcttattctaagaaatcatcattcact
gcaccattgaatttattgaatgacacattaaatgacaagaattatgaccctcttgctgat
aaccgaccagcccgaattgctgacagggaagatgactatcgagctattcgtaggcagatg
attatttctcctgaaagatatgatccttttgctgaaggcggcaaaactcccgatccaaaa
ctgaacaaacgaactttctctgatgtgatggttgaacaacgacttacacaccaacaggct
gctttacggcaacaactggtagagaaggccaaatcaggagagttgcatgcagtcaatggt
tcatcaggagattcttcaagtacatcagcatccgtagctgcagcagcggcagcggcagcg
gctgctgtggcccagaaacaaccggtgaagagacggcgatgggatcaagcaacagatgac
agcacaccagccaagaagacatcaagttccagttgggatgctgcagaagctacagcaaat
accccttccagcactcgctgggacgagaccccaggtcgtagtaagggtggagaaacaccc
agtgccacacctggtgcgagtactcgagcttgggaagcaactcccggtcatgccacacct
ggtgctgctacacctgggagggacactcccggacaccaggcgacaccaagtgctcgcaga
aatagatgggatgagacaccaaaaacagaaagggaaactcctggccatggtagtggctgg
gccgaaacaccaaggactgatcgaggtggggatcttattcaagatacaccaacacctgga
gctagcaaacgtcgatcgagatgggatgaaactccagcagctgcaactcctggaggaatg
actccaggtagtatgacaccaaatatgactccaggtggtaccacaccaggtggcatgaca
cctacaaatatgacaccaagtggaatgactccgagtgggatgacacctggaaatatgacc
cctggaggcatgacccctggtggtaccacacctacaggccagaaagccatggccatggct
acacctacacctggccatctcatgtctatgacacctgaacagctacaggcttatacttgg
cagagagagttggatgagaggaacagacctctgtcagatgaagaacttgattccatgttt
cctacaggctataagatcctccaaccacctgctggttatgtaccaattcgaactccagct
cgtaaactaactgccactcccacaccaatggcaggaaccccaatgggattccgaatgcaa
acaccagatagcaaggtttcaattgttgacatgcaacctaaaggtaatttaccaatgatg
aaaccagatgacatgcagtattttgacaaactcttggttgatgtggatgaagagaccctc
actcctaaagaacagaaagaaagaaaaataatgaaattgttattgaaaattaagaatggt
acacctcctatgagaaaggctgctcttagacaaatcactgataaagctcgagattttggt
gctggtccattgttcaaccaaatcctacctttgctaatgtcacccacacttgaagatcaa
gaaagacatttactagtgaaagttattgatcgtatcctctacaaactggatgatttggtg
cgaccttatgtgcacaaaattcttgttgttattgaaccgttattgattgatgaagactac
tatgccagagttgaaggtagagaaattatatctaatttggcaaaagcggcaggtctggca
accatgatttctacaatgagaccagatattgacaatatggacgagtatgtacgtaacacc
acagccagagcatttgcagtcgtcgcatctgctcttgggatcccttctcttctgcctttc
ctaaaagctgtttgtaaaagcaaaaaatcttggcaggcaagacatactgggatcaaaatc
gtccaacaaattgctattcttatgggctgtgccattcttcctcatttgaaaagtttagtg
gaaattattgaacatggtctgattgatgagcagcagaaagtgcgaaccatcacagcttta
gccttggcagctttagctgaagctgctacaccttatggtattgagtcctttgatagtgtg
ctcaaacccttgtggaagggtatcagacaacacagaggaaagggtctagctgcctttttg
aaagccattggttatcttattccattgatggatgctgaatatgccaactactataccaga
gaagtgatgttaatcctcattcgagaatttcagtctccagatgaagaaatgaaaaagatt
gtgttaaaggtagtgaagcagtgttgtgctacggatggtgtggaaccccaatacattaaa
gaggaaattttgccaccattttttaagcacttctggaaccagagaatggctttagaccga
aggaattatcgccagttggtagacacaacagtggaaattgctaacaaagttggagctgcc
gaaattattgtacgtattgtggatgatctgaaagatgaagctgaacaatacagaaagatg
gttatggaaacaatagagaaggttatgggtaaccttggtgctgctgatatagattcaaga
ttagaagaacaacttattgatggtatattatatgccttccaggaacagacaacagaggat
gttgtcatgttgaatggctttggaactgttgtgaatgcccttggcaaaagagtaaaacca
tatttgccccagatttgtggtactatattatggcgtcttaacaataaatctgccaaggtc
aggcagcaagcagcagatttgatatcaagaattgcagttgttatgaaaacttgtcaagag
gagaaattgatgggtcacttgggtgttgtattatatgaatacttgggagaagaataccct
gaagtgttaggaagcatcctaggggctcttaaaggtatagtcaatgttataggaatgacc
aagatgacgcctcctatcaaagacctcctccccagactaacaccaattctaaagaacaga
caagagaaagtacaagaaaactgcatagatttagttggacgaattgctgatcgtggagca
gaatttgtatcggcaagagaatggatgaggatttgttttgaactccttgaactgttaaaa
gctcacaaaaaggcaattcgccgagccacagtgaatacatttgggtatattgcaaaagct
attggccctcatgatgtattagcaacacttttgaacaatctgaaagtccaagaacgacag
aatcgtgtgtgtaccactgtagctattgctattgtagctgaaacctgctcccctttcact
gtcctccctgcactgatgaatgaatatagagttcctgagttgaatgtccaaattggtgtg
ctgaagtcattatccttcatgttccagtacattggtgaaatggcaaaagattacatctat
gcagtcacttcattgcttgaagatgctttaatggacagagaccttgttcatcgtcaaaca
gcaatggctgctattcagcatttgtcccttggagtgtatggttttggctgtgaagatgct
ctaaatcatttaatgaactatgtctggccaaatatttttgaaacatcaccacatgttgta
caagcatttatgggagccattgaaggacttcgagttggtttgggatcggcaagaattctc
cagtatgctctacaggggcttttccaccctgcacggaaagtgcgagatgtttactggaaa
gtgtacaacactgtatatatcggggcccaagacggcatgattccagcctatcctcgcata
ccaaatgatgtgaaaaaccaatacattcgctatgaacttgattatatgttatga

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