Octopus bimaculoides (California two-spot octopus): 106875173
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Entry
106875173 CDS
T04127
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
106875173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obi03400
]
106875173
DNA repair and recombination proteins [BR:
obi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
106875173
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XLF
Motif
Other DBs
NCBI-GeneID:
106875173
NCBI-ProteinID:
XP_014778689
UniProt:
A0A0L8GSM2
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Position
25:complement(20981294..21029387)
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AA seq
314 aa
AA seq
DB search
MEDMTFIKVIANNREFYLFTTIKDEGYDLIITDCQDFWSGFVLKNDSNNRCSDFLPLTRI
SYQDRSFSYEIDHFSNEKILFRWKEENAAEDLKFILGSATLSKIDDIRCMTQRIFDHCVN
MISNINQEVTSVKKDKDMLLQEKADTLKRLDKLVGTKETMEQELYSKFLLVLNSKKTEIS
TLREKVKDLESKDLKTSEECEEVDSDMETSPSSSIYEQETQIDTEPKPMFSDESSDEEIS
LTSRQNLETHFKEKKRAKVLTTTTSSSSVSYPSSTATTKRNSLPRKRSLKKTNLENDTMS
PTEMIDSDILLDNI
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaagatatgacatttattaaggtaatagccaataacagagaattctacctcttcact
acaattaaagatgagggctacgatttgattataacagattgtcaagacttttggagtgga
ttcgtgttgaagaatgacagcaataatcgatgttcagatttcctaccattaaccagaata
tcttatcaggacagaagttttagctatgaaatagatcatttttctaacgaaaagattcta
ttcaggtggaaggaggaaaatgcagccgaagatctcaaatttattcttggttcagcaaca
ctttctaaaatcgatgacatcaggtgtatgacgcagagaatttttgaccattgtgtaaat
atgatatcgaatataaaccaggaagtaacgtcagtgaagaaagataaagatatgttatta
caagagaaagctgatacactcaagcgtttagataaacttgttggtaccaaagagacaatg
gaacaggagctgtattccaagttcttgcttgttctaaattccaaaaagactgaaatttcg
acacttcgtgaaaaagtaaaagatttagaatccaaagatttgaagacgtctgaagagtgt
gaagaggtcgattcagacatggaaacatctccttctagcagtatatatgaacaagaaaca
caaattgacacggaaccaaaaccaatgttttctgatgagtcaagtgatgaagaaatcagt
ttgacatccagacaaaacctggagacacattttaaagaaaaaaagagggcaaaggtttta
actacaacaacatcatcatcatcagtttcatatccatcatctacagccacaacaaaaaga
aattcattgcctagaaaacggtctctcaagaaaactaatctggagaatgatacaatgtca
cccactgaaatgattgatagtgacatacttcttgacaacatataa
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