Octopus bimaculoides (California two-spot octopus): 106875187
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Entry
106875187 CDS
T04127
Name
(RefSeq) nibrin isoform X1
KO
K10867
nibrin
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106875187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obi03032
]
106875187
03400 DNA repair and recombination proteins [BR:
obi03400
]
106875187
DNA replication proteins [BR:
obi03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
106875187
DNA repair and recombination proteins [BR:
obi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
106875187
BRCA1-C complex
106875187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIBRIN_BRCT_II
Nbs1_C
FHA
BRCT
RTT107_BRCT_5
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
106875187
NCBI-ProteinID:
XP_014778710
UniProt:
A0A0L8GRV3
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Position
4:complement(16855861..16885005)
Genome browser
AA seq
705 aa
AA seq
DB search
MSWSLENQHDGTDEHKITDSGEFTIGRRDCDLNIADDKTVSRKHAIITIDPAKIPYTKSS
LTIQDVSSYGTYINRKKCNQNTAIELKEGDKLMFGSPKSTFWVRFNPLVVTSSCLKNSAK
LELDQVMKYFDGKVANEWSDKCNFLVMDYISVTVKVVCALAAQCQIVTIDYFKSLKTASE
LSQPYKGPEEFLPKLSPNFVIKNGTFQPNPLRKTLFSGITFYFLKSSQLRKMKMAIELAG
GHSCLCASKPVDDSTLVKDTSIVMQAEPSEDEWVSHVLSLLLSHSKRMITDAEIGQAILC
CNTEKYCNPNAALAKTFSQLPSQTVKFHSQQTISTHTQDSLMFLNQSNIPKESVKMPNPS
TNIKATESSFPSSDAPESKIVSNKRSRSPDKPENPFSAKVDDKEPSNKKTRLFAESVPDN
TNPGSSIKREPSVQILAPDSLSQAPLIKPQPILVIEDSDPEDVSSENEDQNSKNVPETTS
DKLKQSNLSNTLIDSESTEAAPGTEILTPVSIKKEVVDSTYEHKKHSKPSTLDLFSEDSQ
LKDKQGKITENSTKFTDVYIKPGYLNTKFTTVNTTVKIKQEIKKEEDLPKSCAAISFTNL
VHRQPKPPPPREKTNSKDAPQGFAYYKGALVRNFKNFRKNSNSGACSLPKVIGGSDLAVH
NPTISKDLDEWFKEASVKESQENEEIRKIEKLFNWGPNKKGSRKR
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggagtttagagaatcagcacgatggaactgatgagcacaagattacagattct
ggggaatttacaattggacggagagactgtgacctgaatattgccgatgacaagacagtc
agcaggaaacatgctattattacaatagatccagctaagattccctatacaaagtcttct
ctgactattcaagatgtctcatcctatggaacatatatcaataggaagaaatgcaatcaa
aatacagcaatagaattgaaagaaggggacaaacttatgtttggttccccaaagtcaaca
ttttgggttcggtttaatcctttagttgtcacgtcgtcttgtttgaagaattctgccaag
ttagaattggaccaagttatgaaatattttgatggcaaagtggctaatgaatggagtgat
aaatgcaactttttggttatggattatatttcagttactgtgaaggttgtgtgtgcactt
gctgcccaatgtcagattgttaccattgactattttaaaagtctaaaaacagctagtgaa
ctgtctcaaccgtataagggtcctgaagagtttcttcccaaattgtctcctaactttgta
atcaagaatggaacatttcaaccgaatcctttacggaaaacccttttcagtggaattact
ttctactttttaaaatcttctcagttgaggaagatgaagatggccattgaacttgctggt
ggtcattcttgtttgtgtgcttctaagcctgtggatgattcaactttagtaaaggataca
tctattgtaatgcaagctgagcccagtgaagatgaatgggtttctcatgttctgtctctg
ttactaagccacagcaaacgtatgataaccgatgctgaaattggccaggcaattctctgt
tgtaatactgagaagtattgcaatcctaatgcagctttagcaaagacattcagccaactt
ccaagtcagacagtgaagtttcattctcagcaaactattagtacacatacccaagattct
ttaatgtttcttaaccaatcaaatatacccaaagaatctgtaaaaatgccaaatccttct
acaaatatcaaagcaacagaatcgtcatttcccagcagtgatgcgcctgaaagtaaaatt
gtctctaataaacggagccgaagtccagataaaccagaaaatcctttttctgctaaagtg
gatgataaagaaccatcaaacaaaaagacacggttatttgcagaatctgttccagataac
acaaatcctggtagttctatcaaaagagaaccgtctgtacaaatacttgcaccagacagt
ttgtctcaggctccactcattaaacctcaacctattttagtgattgaagattctgatcca
gaagatgtttcgtctgaaaatgaagatcagaattcaaagaatgtaccagaaaccacttct
gacaaattgaaacaatctaatttaagcaatactcttatagattctgaaagcacagaagca
gcaccaggtaccgaaatactgacgcctgtttctattaaaaaagaagtagttgattctact
tatgaacataaaaaacactcaaaaccttccactttagacttgttttcagaagattcacaa
ttgaaagacaaacaaggaaagataactgaaaattcaacaaaattcacagatgtttacatc
aaacctggttacctaaatacaaaattcactacagtgaatacaacggtaaaaataaaacaa
gaaataaaaaaagaggaagatctacctaagtcttgtgcagctatttcatttacaaacctt
gttcatagacaaccaaagcctccaccccctcgggaaaagactaattcaaaagacgcacca
caaggatttgcctattataaaggagctttagtgcgtaacttcaagaatttccggaagaat
tctaacagtggtgcttgctccttaccaaaagtcattggcggcagtgacctggctgttcac
aacccaactataagcaaagatttagatgaatggttcaaagaagccagtgtgaaagagagt
caggagaatgaagaaatcagaaaaattgaaaaacttttcaattggggaccaaataaaaaa
ggctccaggaagcgttga
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