Octopus bimaculoides (California two-spot octopus): 106875720
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Entry
106875720 CDS
T04127
Name
(RefSeq) rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obi04131
]
106875720
Membrane trafficking [BR:
obi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
106875720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
RGS-like
PH_16
C1_1
PDZ
PDZ_6
RGS
PDZ_2
zf-RING-like
C1_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
106875720
NCBI-ProteinID:
XP_052824019
LinkDB
All DBs
Position
5:complement(54073704..54439609)
Genome browser
AA seq
1268 aa
AA seq
DB search
MSLPESKRTSVGRKSSFRGLRLGSLRTVKDDQPVARKEAKPPIPVDSDSAGQLQRCVIIQ
KDEKGYGLTVSGDNPVFVQSVKPDGAASKAGVQQGDKIIKVNGTSALSLNHIEVVNLIKS
GSYVALTLLGKSQGQIKAMESKENSSSSHRITGPRPVDHEKERNMRQQSIRTIEKMLILQ
QEECGRARKIYAKSPSEKNKEELNEKERTVNTLETRLRQLQSEFPSDFVELGLPDLSSGR
LPGGSKHIKHGSVPASIYKTRDLVDIRDINVSRSKSDASSKASQVVAGDTLGSSHSQLPP
GYQQRDNTKERTSLTVGSPDTSGILDSPHASPSNSPTPVHLADMNSSNPDADRCGTEDGG
TAAIMTMEEDDDDEVPTDEAENRLPFGNFEEVEKRNAYLSILLHYLISNDDPSALFFYII
SDIYSSANGSSKELRKWAYEIYSTFLIQNAPLKVTIDENLVKIIDDTLISKTDKEECLRS
LFNDAKHDVRGAVNLMLNDFRNKQKLGLGNFYGVDELELDMDKSQEMKIIENYLVPHLES
FTEEKAKCARDQALGWALATYLRHIGVTKLSYHSSVLDRVHSFVMKERKEKGIKLPGTKS
KTKAYRNHQFVPQHYYQLTDCTVCSSPVWGVGFQGYQCSNCEWNVHKHCIESIEVLCPQG
RRKRTSGLMDKWGRKPSNTNAPHINQRRESCSPTQSGSSGVSGADEDLDSGFHSVNSIVK
RFEKSPGENEDERHKRATDLGRSESLKDRPDQKGDRRTRRAKSDVDMDENTIKVLNNSGS
SSTSSLHSARKISDKFFGSSDSPCNSNDADNEDTMVDDSDLEVEPELPHLTKVISEDLLR
KMKPKEKKRQEVINELFYTERAHLRNMKILDKLFRKPMMQREYISQNLIDSLFPNLEELI
KLHKSLNEEMKTRRKEHPVISGVGDILLRRFDGEAGEHFKKNCAIFCRNQSSALESLRLK
QRKDQKFAQFLMESESSIMCRRLQLKDLIPAEMQRLTKYHLLIDNLLKYTTTSTEEYAML
EKINRLCKRILEYVNLAVQECENSHRLYELQRRLDKRPLENIPEFEEFRNFSLTDYKLIH
EGFLTWHVNQTRNKNIDVHVVLLDKYLVFLQKQDDRLVLKCHDTAILVGGQGTDMRCKFT
HRPILDIDKVLTRNVATSKYKTFFFLDRDVVEHLGQLTDERLNVEKADEAHQPEAHFAGP
EDVIISDVAIARAESVQSPIGVLRTIKIFSISCLSNQNWHSSDIITLQCSLTLYYAGEQH
LDLVHSGA
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgcccgagagcaagcgtaccagtgtcggccgaaagtccagtttcaggggccta
aggttgggaagccttcgtacagtcaaggatgatcaaccagttgccagaaaagaggccaaa
cctcccatacctgttgattcagattcagcaggtcagctccagcgttgtgtgataatccag
aaggatgagaagggttatgggcttactgtcagtggagataatccagtttttgttcagtct
gtcaaaccagatggagcagcctcaaaagctggggtgcaacaaggggataaaattatcaag
gtgaatggtacttcagcattaagtttaaaccacattgaagttgtcaacctcatcaaatct
ggttcttatgttgcactcacattactggggaaatctcaaggacagataaaagctatggag
tctaaagagaattccagttcaagtcaccgtataactggtccacgccctgttgatcatgaa
aaggaaaggaatatgcgacagcagagtattaggaccatagaaaagatgcttatactccag
caagaagaatgtggtagagctcgtaaaatatatgctaagtctccatcagaaaaaaacaaa
gaggaattaaatgaaaaagaacggactgttaatactttggaaactcgcctacgacaactg
caaagtgaatttcctagtgactttgttgaactaggacttccagatctttcttcaggacgg
ctaccaggggggtccaaacacattaagcatggctccgttccagcttccatctacaaaaca
agggatttagttgatattcgggatatcaatgtgtctcgctccaagtctgatgcctcaagt
aaagccagccaagtagtcgctggagacaccctcggctccagccactcccagctcccacct
ggatatcagcaaagagacaacaccaaggagcgcacatctttaacagttggttcacctgac
acgagtggtattttggattcaccgcatgctagtcccagtaattctccaacacctgttcac
ctggctgatatgaacagttcaaatccagatgctgacagatgtgggactgaggatggaggc
acagcagcaataatgaccatggaagaagacgatgatgatgaagtgcctactgatgaggcc
gaaaatcgtttgccatttggtaattttgaagaagtagagaagcggaatgcttacctttct
atattgctgcactatcttatttctaatgatgacccctcagcactgtttttctatataata
tctgatatttactcatcagctaatggaagtagtaaagaattgagaaaatgggcttacgaa
atatattccacatttttaattcaaaatgctccattaaaagtaacgattgatgagaattta
gtgaaaataattgatgacactttaatcagtaaaactgacaaagaggaatgtcttcgctct
ttattcaatgatgcaaaacatgatgttcgtggtgctgtaaacttgatgctcaatgacttt
aggaacaaacaaaagttagggcttggcaatttttatggtgttgatgaacttgaacttgac
atggataaatctcaagaaatgaaaattattgagaattatcttgtaccacatttagaaagt
tttacagaagaaaaagcgaagtgtgcaagggatcaagcacttggctgggcgcttgcaaca
tatcttcgtcatattggtgttacaaaactgtcatatcacagttctgttttagatcgggtt
cacagttttgtgatgaaagaacggaaagaaaagggaattaaactcccagggaccaaatca
aaaacaaaggcataccgcaaccatcagtttgttcctcaacattattaccaactgactgat
tgtacggtttgttctagtcctgtgtggggagttggttttcaaggctatcagtgtagcaat
tgtgagtggaatgttcataaacattgcatagaatccattgaagtcttatgtccacaaggt
cggagaaaacgaacgtctgggctgatggacaaatggggccgaaaacctagtaatacaaat
gcaccacatataaaccaaagaagagaatcatgtagtccaacacaaagtggaagttctggt
gtttcaggggctgatgaagatctcgactctggttttcattcggtaaacagtattgtaaaa
cgattcgagaaaagtccaggggaaaatgaagatgaaagacacaagcgtgctactgattta
gggcgttcagagagcttaaaagatcgacctgaccagaaaggtgatcgacgaactagacga
gctaaaagtgatgtggatatggatgaaaacactatcaaggtacttaataactcaggaagt
tcatctacgtctagtctacattctgccaggaaaattagtgacaagttttttgggagttca
gacagcccctgcaattccaatgatgctgataatgaagataccatggtggatgattctgat
cttgaagtggaacctgagttacctcatcttactaaagtgatatctgaggatcttttgcgt
aaaatgaaaccaaaagaaaagaaacggcaagaagttataaatgaactcttttatacagaa
cgtgctcatttgaggaatatgaaaattcttgataagttatttcgcaaacctatgatgcag
cgtgaatatatatcacaaaatcttatagactctttattcccaaacctagaagagttgata
aaacttcacaagtcattgaatgaagaaatgaagaccaggaggaaagagcatcctgttatc
tctggtgttggggatattttattaaggaggtttgatggtgaagctggtgaacattttaaa
aaaaactgtgcaatcttctgtcgaaaccaatcttcagctttagaatctcttcggttaaaa
cagagaaaagaccaaaaatttgcacagttcttaatggaatctgaatctagtatcatgtgt
cggcgtttacagctaaaagatctcattccagcagaaatgcaacgtcttacgaaataccat
ctacttattgataatttactaaaatataccacaacaagtacagaggaatatgcgatgctt
gaaaaaattaaccgactctgcaagcgtattttagagtatgtgaatttagctgtacaggaa
tgtgaaaatagccaccgactctatgaacttcagaggcgactagacaagagaccattggaa
aatattcctgaatttgaagaatttagaaatttctccttgacggattacaaactgatccat
gagggcttcctaacatggcatgtcaaccaaactcggaataagaacatcgatgtgcatgtt
gtattgttagataaatatttagtgtttctacagaaacaagatgatcgattagttcttaaa
tgtcacgatacagctatacttgtaggaggacaaggcacagatatgcgttgtaaatttaca
caccggcctattttagacattgacaaagtgttaacacgtaatgttgctaccagtaagtac
aaaacttttttttttttagatagagatgttgtagaacaccttggtcaattaaccgatgaa
agattgaatgtggagaaggccgatgaggcccaccaaccagaagcacattttgctggtccg
gaagatgtcatcatatctgatgtagcgattgcacgtgctgagtcagtacagtctcctatt
ggagttttaagaaccatcaagatattttccatttcttgtttatctaaccaaaactggcac
tcttcagatatcattacactacaatgttccttaacactgtattatgcaggggagcagcat
ctagatcttgttcattcaggggcttag
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