Octopus bimaculoides (California two-spot octopus): 106875944
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Entry
106875944 CDS
T04127
Name
(RefSeq) protein CASC3 isoform X2
KO
K14323
protein CASC3
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03013
Nucleocytoplasmic transport
obi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106875944
03015 mRNA surveillance pathway
106875944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106875944
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106875944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
106875944
NCBI-ProteinID:
XP_014779755
LinkDB
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Position
2:complement(129798478..129844743)
Genome browser
AA seq
1024 aa
AA seq
DB search
MAERRRRRRLSEEESGEEVSEDSKEVKTRDCPSECVSEDEHSDEVEVSDYESVGDGKKST
EAENGEKEDEEEGDDEEEDDDEDEEDESEEDSEEESEEDSEEESSEVESEGEYIEDGIDE
ERQSGDGEEQPIDDKDKELDDDEDRRNPAYVPRRGAFYEHDTRITEDAEKEQIRLIPKKK
LWKDEGKWQHDRFREDQQAPKSREELMVIYGYDILASDQPPAAPPRMNKPQIRKSQQRQQ
LHDFIDSKWSGQRNSPDVQRKNYRNKRGSRGGTRGRLGDYEENRRDYLENNGQGEYVDNK
REYREIRHEVTDNHWDQPETRRTCIDNRGDSEEIPKQNFVEKKLEDTETKQEVTEKWQPS
EESKQEIVEKPKEEECHLKKESGNDRKETVEIKKEPVEIKRDYGDNRRDYSDNRRDYGDN
RRDCSDNRRDYGDNRRDHIDNRRNHGDNRRDHGDNRRDHGDNRRDYGDNRRDYGDNRRDY
GDNRRDYGDNRRDYCDNRRDYGDSRRNYGNNHRETVDNRRDFSDNRRDYGDRSYNGETKP
NHSYRTNARAGPQRQFTNPSYRNDNGDNPKLDSENSTTYGFRKSPENNNNFKTHENRVYK
TNYENGHRNIVDNRAYRNTESNNYCHRNNYENKKRTPDRNFSHEEVHDSIPKQKGAVLNN
VEFSGSVVTANNSMEKKSYSKDRRIKGITRTRVTAAPLPENMEDPERNSFNLEAIPADNK
SDLGGNASKTENVSRPKRYSTQRQRNVPEVNYPEQIPVEGTTYYSPNFTQGPPHIFHPEQ
GPPTHQDGAAFQPTMLQAPTPIPYTLPVSTTGIPSAPRMFGPAPVPVSIPTAPPAMLPPQ
YIGAGMIYGAPPHGPYQVPVMPGYQSPPPSTHSQTSALPEMFRGGTTYYSTDLQQPSPSR
SPVRRHKSAIPIIDPQDVKIQKSQSANSSTPGETTTSAAESNSSEAPEAPSNVAAESNGS
HSKDLIVNSSSTSDSTCTSTTVASGGKSIEETNSTPLNTAHKQVELAETCTNEQTTQPIL
EAAA
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaagacgtcgacgtaggagactatctgaggaggagagtggtgaagaggtatca
gaggattctaaagaagttaagacgcgtgattgtccttccgaatgcgttagtgaagatgaa
cattcagatgaagttgaagtgtctgattatgagagtgttggtgatggaaaaaaatctact
gaagctgaaaatggagaaaaggaagatgaggaagaaggagacgatgaagaagaagatgat
gatgaagatgaggaagatgagagtgaagaagacagtgaggaagaaagtgaagaagatagt
gaagaagaatctagtgaagtagagagtgaaggagaatatatagaagatggcatcgatgaa
gaacgtcaaagtggtgatggtgaggaacaaccaattgatgataaagataaagaactggat
gatgatgaagatcgaaggaaccctgcttatgttccaagacgaggggctttttatgaacat
gatactcgcatcactgaagatgcagagaaggaacagataagattgataccaaagaagaaa
ctatggaaagatgaagggaaatggcaacatgaccgtttccgagaagatcagcaggctcca
aagtctcgtgaagaactgatggttatttatggttatgacatacttgcaagtgatcagcca
cctgctgcacctccaagaatgaacaaaccccagatacgcaaatctcaacaaaggcaacag
ctgcatgacttcatagattcaaagtggtctggacaacgaaacagccctgatgttcaaaga
aagaattatcgtaataaaagaggatcacgaggtggaacccgtggtcgacttggagattat
gaagaaaataggagagattatttggaaaataatggacaaggagagtatgtggataataag
cgagaatatcgtgaaattcgacatgaggtgactgataaccattgggaccagcctgaaacg
aggagaacttgtattgacaatagaggagattctgaagaaattcctaagcagaactttgta
gaaaaaaaattggaagacactgaaaccaagcaggaggttactgagaaatggcagccctct
gaagagagcaaacaagagatagttgagaaacctaaagaggaagagtgccatttgaaaaag
gaatctggtaatgacaggaaagaaactgtagagattaaaaaggaacctgtggagatcaaa
cgtgattatggtgataacaggcgagattacagtgataacaggcgcgattatggtgataat
aggcgtgattgcagtgataataggcgagattatggtgataataggcgagatcacatcgat
aacaggcgaaatcatggtgacaataggagagaccatggtgataacaggcgagaccatggt
gacaatagacgagattatggtgataatagacgagattatggtgataataggcgagattat
ggtgataacaggcgagattatggtgataaccggcgagattattgcgataacagaagagat
tacggtgatagcaggagaaattatggaaacaatcaccgtgaaacagttgataatcgacgt
gattttagtgacaacagacgagactatggtgacagatcctacaatggtgaaaccaaacct
aaccatagctaccgtacaaatgctagagctggcccacaacgtcagtttactaaccctagc
tatagaaatgataacggtgataatccaaaactggattctgaaaattcaacaacttatgga
tttagaaaaagtcctgaaaacaacaataattttaaaacccatgaaaatagagtctataaa
actaactatgaaaatggacacagaaacattgttgacaacagagcttacaggaatacagag
agcaacaactactgtcataggaataattatgaaaataaaaagaggactcctgatcggaac
ttctcccatgaagaagttcatgattccataccaaaacaaaaaggtgctgtgttgaataat
gttgaattcagtggatcagttgttactgccaataatagcatggaaaaaaaatcttactct
aaggacaggcgtataaaaggaattacacgtacacgtgtgacagcagcaccgcttcctgaa
aatatggaagaccctgaacggaattctttcaatttagaagccatacctgcagataacaaa
tcagatctgggtggtaatgcttccaagacagaaaatgtctctcgtcctaagagatattca
acacagcgccaaaggaatgtaccagaagtaaactacccggagcagataccagttgaagga
actacatactatagcccaaattttacccaaggtccaccacacatatttcatcctgaacaa
ggtccacctactcatcaggacggagcagcgttccagcctaccatgttacaggctcctacc
cctatcccttacacattaccagtttctaccactggcattccttcagctccacgtatgttt
ggtcctgcaccagtgcctgtgagcattcctactgctcctcctgccatgttgcctccacag
tatattggggctgggatgatatatggagccccaccacatggtccctatcaagttccagtg
atgcctggttatcaatcaccaccaccctctactcattcacagacttcagctttaccggaa
atgtttagaggaggcaccacctattattcaactgatttacagcagccaagccccagccgg
tcaccagttcgcaggcataaatcggctatccctattattgaccctcaagatgtaaaaatt
caaaaatcccaaagtgccaacagctctactccaggtgagaccactacatctgctgcagag
agcaacagttcagaagctccagaagctccctctaatgttgcagctgaatcaaatggtagt
cacagcaaagatctaatagtgaactcatcctccactagtgattcaacttgtacttcaaca
acagtagctagtggcgggaaaagtatagaggaaacgaattctactccattgaacacagct
cacaagcaagttgagcttgctgaaacatgtacaaatgaacagacaacacagccaatatta
gaggctgcagcttag
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integrated database retrieval system
