Octopus bimaculoides (California two-spot octopus): 106875961
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Entry
106875961 CDS
T04127
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5 isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106875961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106875961
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
106875961
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
106875961
NCBI-ProteinID:
XP_052824339
LinkDB
All DBs
Position
5:complement(50873602..50958450)
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AA seq
265 aa
AA seq
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MAHQTPKMPTYPRSGWPKAGGVSGSQHGSAKYGNITLSPSSITLERTINLYPLTNYTFGT
KEPLYEKDSSVPARFQRMREEFEKIGMRRSVEGVLIVHEHGLPHVLLLQLGTTFFKLPGG
ELNPNEDQVDGLKRLLTEWLPMRGSTAQSYSDNTEESREITAKKKTLGRQDGAPMDWVIE
DTIGNWWRPNFEPPQYPYVPAHITKPKEHKRLFLVQLPEKALFAVPRNYKLVAAPLFELY
DNAAGYGPIISSLPQALSRFNFIYN
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggctcatcaaactcctaaaatgccgacgtaccctaggtctggttggccgaaggctggc
ggtgtgagtggttcacaacatggttcagcaaaatatggaaacataacgctctctccttcc
tcaattactctcgaaagaaccatcaacttatatcctctaactaattatacgtttggtaca
aaagaaccactttatgaaaaggacagctctgttcctgcaagattccaacgaatgcgagaa
gaatttgaaaagattggaatgcgccggtctgtagaaggtgtcttgattgttcatgagcat
ggtttaccacacgttcttcttttgcagttaggaacaacattttttaaactgccaggtgga
gaattaaatccaaatgaagaccaagttgatggactgaaaagactgctaactgaatggtta
ccaatgaggggatctacagcacagtcatacagtgacaacacggaggaatccagggaaatc
acggctaaaaaaaaaacacttggtcgtcaggatggtgccccaatggattgggtaattgag
gatacaattggtaactggtggcgaccaaactttgaacccccacaatatccttatgtacca
gctcacataacaaaacccaaagaacacaaaagactatttttagttcaacttcctgaaaaa
gctttgtttgctgtgccacggaattataaacttgttgctgctcctctgtttgaattatat
gacaatgctgctgggtatggccctattatttccagtctacctcaagctctaagtcggttc
aactttatctacaactga
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