KEGG   Octopus bimaculoides (California two-spot octopus): 106876036
Entry
106876036         CDS       T04127                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03020  RNA polymerase
obi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106876036
  09124 Replication and repair
   03420 Nucleotide excision repair
    106876036
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:obi03021]
    106876036
   03400 DNA repair and recombination proteins [BR:obi03400]
    106876036
Transcription machinery [BR:obi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     106876036
DNA repair and recombination proteins [BR:obi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106876036
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 CCDC93_CC
Other DBs
NCBI-GeneID: 106876036
NCBI-ProteinID: XP_014779904
UniProt: A0A0L8GLG8
LinkDB
Position
3:94881070..94886855
AA seq 146 aa
MAAAASASTAASSNEQTEEDASELQFPKEFESAETLLISEVHMLLEHRKQQNESAEEEQE
LSEVFMKTHQYTQRFSKFKNRETISAVRSLLLQKNLHKFELAALANLCPDSAEEAKSLIP
SLEGRFEEEELQQTLDDIQTKRSFQY
NT seq 441 nt   +upstreamnt  +downstreamnt
atggctgccgccgcttcagcttccacggcagcttcatccaacgaacaaacagaagaagat
gcttcggaattacaatttcccaaagaatttgaatctgctgagactttgttaatatcagaa
gtacatatgcttttagagcacaggaagcaacagaatgaaagtgctgaagaagaacaagaa
ttatctgaagtgttcatgaaaactcatcagtatacacaacgttttagcaaatttaaaaac
cgagaaacaatctctgctgtgagaagtcttctactacagaaaaatctacacaaattcgaa
ctggcagcattagccaatctctgcccagacagtgctgaagaagcaaaatctttgatacca
agtttggaaggaagatttgaagaagaggaattgcaacagactttagatgatattcaaacc
aagaggagtttccagtattga

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