Octopus bimaculoides (California two-spot octopus): 106876049
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Entry
106876049 CDS
T04127
Name
(RefSeq) nuclear pore complex protein Nup50 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106876049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106876049
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106876049
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
RnlA-toxin_DBD
Motif
Other DBs
NCBI-GeneID:
106876049
NCBI-ProteinID:
XP_014779930
UniProt:
A0A0L8GLU9
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All DBs
Position
25:complement(1109137..1182390)
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AA seq
441 aa
AA seq
DB search
MSEVSCDDRRVKPRSDKEVTMAKRNATSELNDRNWDEEEEDEEAGEFVAAKKEVLKQRNI
IKAKRRSNISTASPGAGIFANFAGFSSTPNATTTTATTTTGVTLTVTNNTMKPLLDASSS
SNTSKPTGAAASITGASTGSDESDSKLHVQLKKLNKSVLQWMQQHVAKDPYCILTPIFKD
YEKYLKTIQDEFKAKPDTKDTGSIPEAATEQETNLDSEKSKEEEQSKPDLKKNIWPNLSV
TSPLLSSGSSSSSSSTTTSTGQTSISTTPAFGGFNFKPADTQSTFSFASTLNTSNAVKGS
NPDEEDEYVPPKAEVKEIKEEGSVYSRRCKLFYEKDKNWIDKGIGNLHVKPFKDKAQLII
RADTNLGNILLNIMLLPTMQLKRQGKNNVSLVCIPNPPLTKGGSENKPVPLLIRVKTGEE
ADDLLAQLNKHKHGTDSQENV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagtatcgtgtgatgacagaagggtaaaaccaagaagtgacaaggaagtaact
atggcaaaacgtaatgccacgtcagagctgaacgaccgaaattgggatgaagaagaggaa
gatgaagaggctggagagtttgtggcagcaaagaaagaagttttgaaacaacgaaacata
ataaaagccaaacgaaggtcaaatatttcaaccgcatctccaggagctggaatatttgca
aattttgctggtttctcatcaacccctaatgctactactactactgctactacgacaaca
ggagtcacgttgactgtaaccaacaacacaatgaaacctcttctcgacgccagcagcagc
agcaatacttccaaaccgactggtgctgcggcctccatcaccggtgctagcacaggctct
gatgaatccgacagcaagctgcacgtgcagctgaagaagctcaacaagagtgtattacag
tggatgcagcagcatgtggccaaggatccttactgcatcctgacacccattttcaaagac
tatgaaaagtatttgaagactatccaggatgaatttaaagcaaaaccagataccaaagac
actggttcaattccagaagcagccactgaacaggaaaccaatttagattctgaaaagtca
aaagaggaggaacaatcaaaacctgacctgaagaagaatatttggccaaacttatctgtg
actagccccctcttgtctagtggcagcagtagtagtagtagtagtaccaccacatcgact
ggacagacctccatatctacaacaccagctttcggtgggtttaacttcaaacctgctgac
actcagtcaacattctcttttgccagtactttgaataccagcaatgccgtcaagggaagt
aacccagatgaggaagatgagtacgttccccctaaagcagaagtgaaagagatcaaggaa
gaaggttcagtttatagcagaagatgcaaactgttttatgagaaagacaagaactggatt
gataaaggcattggaaacttgcatgtgaaaccattcaaagacaaagcccaactcatcatt
cgcgctgacacaaacttagggaacattcttctgaacataatgttgcttccaacgatgcaa
ctcaaaaggcaaggcaaaaacaatgtgagccttgtatgcattccaaaccctcccttaacg
aagggcgggagcgagaataaaccagtgccgttgctgatccgagtgaagactggcgaggaa
gctgacgatctcttggcacagctcaataaacataaacatggaacagattcccaagagaac
gtctaa
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