Octopus bimaculoides (California two-spot octopus): 106876145
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Entry
106876145 CDS
T04127
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03015
mRNA surveillance pathway
obi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106876145
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106876145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106876145
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
106876145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
106876145
NCBI-ProteinID:
XP_052833759
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All DBs
Position
29:complement(226829..270562)
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AA seq
510 aa
AA seq
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MAEGVDIDLYDNLEEDFNQLYSHGVDPESSQDTRDHDRASSVYFARNRHGELRHDAKSGS
SAPIMPANYTGKRVSLYVGNLTWWTTDQDLTDIIASIGVPDLLEIKFYENRANGQSKGFA
VVAVGSEASSRIIFDKLPKKKIHSQTPIVTHCNRTSLNQFEAQARKGEPPPPTAKEPNSK
PAERGPSGSSSGNRRESSRYVSRNSRTSQSSPQQGPPGPPGPPPSGPPPPPYNAFKHLKR
AYSTFRLSPPRPGGPPPPVPPPPGVPLVGPPPRQPGGPPPPGMPPRPVPPPQRGPPPPDP
RLAPPRPDWDRPAASYPSPGPPPPQSVPPPGVRLPAPVFTPPPFFSTNTDINISPHLRAS
VHISLSCSLTCIPVGQFETLPFLDPDVKFHANHPPHSQPGDMYVRPPPPAAYPNDPYGRP
PERHESASPAISEQEFEEIFQRNKTVSSSAISRAVQDASAGDFASAIETLVTAISLIKQS
KIAGDDRCKILISSLQDTLHGIEEKSYGSK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaggagtcgatattgatctttacgacaacttggaggaggatttcaaccagctc
tattcccacggcgtcgaccctgaatcttcccaggacacgcgagatcacgaccgcgcttct
tccgtgtattttgccaggaacagacacggagaattgcgtcatgacgctaaatccggttct
tcggcccctataatgcctgcaaactatactggcaaaagggtcagtctgtatgttggaaac
ctcacttggtggacaactgaccaagatttaacggacattattgcttcgatcggagtccca
gacttgctagaaattaaattctatgaaaacagagccaatggccaatccaagggttttgct
gtggttgccgttggctctgaggcatcgtctcgaatcatcttcgacaaattacccaagaag
aagatccatagtcaaaccccgatagtgacccactgcaaccgaacgtccttaaaccagttt
gaggcccaagccaggaaaggggaaccaccgccgccaacagccaaagagccaaacagcaaa
cctgcggagagggggccgagtgggagtagcagtggaaacagaagggaatccagccggtat
gtctcccgcaactctcgcaccagtcaatcttcgccgcaacaggggcctcctggtcctcca
ggacctcccccctctggaccaccgccaccaccatacaatgcgttcaaacatttgaagaga
gcgtactctacctttaggctcagtcccccacgaccaggaggtccacctccacctgtgcca
ccaccacccggtgtcccacttgtaggtccaccaccccgacagcctggagggcccccaccc
cctggaatgcctcccagacctgtaccacccccgcaacgaggccctcctcccccagatccc
aggttagcacctccacgacccgactgggacagaccagcagcatcttacccttctcctgga
cctccgcccccacagtctgtaccaccacccggggttcgactgccagcacccgtatttacc
cctcccccattcttctctacaaacactgacatcaatatatcacctcatctaagagcttct
gttcatatctcgctgtcttgttctctgacttgtattcctgttgggcagtttgaaacccta
cctttcttggacccagacgtcaaattccatgcaaaccatccaccccattcacaacctgga
gacatgtacgttaggccacctccccctgctgcttaccccaatgatccttatggcagaccc
ccagaaagacatgaatctgcatcccctgccatcagcgaacaagaattcgaggagattttc
cagcgaaacaaaactgtctccagtagtgcgatttctcgtgcagtacaagacgccagtgca
ggtgactttgctagtgccattgagacgcttgtcacagcaatatcactgatcaagcaatcg
aagattgcaggtgatgatcgatgtaaaatcctgattagttctttacaggacacgctccat
gggattgaagagaagtcgtacggatccaagtga
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