Octopus bimaculoides (California two-spot octopus): 106876178
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Entry
106876178 CDS
T04127
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03440
Homologous recombination
obi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106876178
03450 Non-homologous end-joining
106876178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obi03032
]
106876178
03400 DNA repair and recombination proteins [BR:
obi03400
]
106876178
DNA replication proteins [BR:
obi03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
106876178
DNA repair and recombination proteins [BR:
obi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
106876178
BRCA1-C complex
106876178
NHEJ (non-homologous end-joining)
MRX complex
106876178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_21
Rad50_zn_hook
SbcC_Walker_B
AAA_15
SMC_N
NET2A
AAA_29
AAA_13
AAA_16
Beta-prop_IP5PC_F
ABC_tran
Motif
Other DBs
NCBI-GeneID:
106876178
NCBI-ProteinID:
XP_014780095
UniProt:
A0A0L8GKX7
LinkDB
All DBs
Position
1:complement(98556979..98651525)
Genome browser
AA seq
1322 aa
AA seq
DB search
MSIIIKMSIQGIRSFGPDDSDKQVIKFFCPLTLILGQNGTGKTTIIESLKYITTGDLPPG
TKTNGAFVHDPKIAHEKEVKAQVKLYFKDIIQKDVIVSRAMIGTQKAKKVETRTLDGVIT
RRSPDGDKSLTQKCAEINREMITSLGVSKAVLENVIFCHQEEANWPLSEGKVLKEKFDAI
FASTRYVKALESIRKYKQVQDASIKEKKTELKYLKEHKEKVTKFENDKSELEGRYAASKD
LVKKMMEELEPIKEKIHGINVRSEEMYKLRNDIEVVQTERKHLQISVEELRKNIETEFEG
STAELQTMINKFEDNLQEKEDSLSEFNKKLDKLANENEGYEQEKSILLVEVGKLDQEAAN
NEENIQSRTDLVMQLATKYNIDDFDKNTIDNKTTKCFIEKLNNTHQQLMSDIKIEKKRFE
ENEQRIQQEMDGVKEKKVQLEQRIKMEEEITKKNIAEIQKCEYALQQMESSAKYLDEISA
DLKSAEKSLKATEESINVAELKKEIQNMSQEKKTLEEQFDELDGLLKKLHQHSTVQTQIS
MLDKEKTTKEEQIKKCKSRHETSIIHLLGEMPRNDLRGTLEEYVSKQSISVQKSTEKLDK
LRQDLSSKETQKRMLLEDMRKRENELKKLEEKLQDACGEDTFEDSLQNIQLKLTQVQDLR
GSLTGSEHFYKKFVVDLKKDSPCCPLCHRGFEQEQEIRELILELENKLRMVPSKLRKSEG
DLEQYQNEYDTLQQLKPIKENLTLLSTTELPDIKNKLDSTNNAIVKLNKSIQEAEEDQQD
LMSDESMAKSILPDILMIDRYLAEVKELNKKSRIQKSLISDVDMDSLGDRSLEDVSNEKD
TIQSKLRSTNHELEHQRQKLSNYSDKVNELHSRVNSLNSEKLQIEKNLQEKIKLEENKAD
LHNQNVTHKASIKKLKEESKPLQASIDKLVDEKDSVTTRKEDKLEKRRKQAEEIQQKGVL
QLKNYMSIILNYEKSGKAALLEEKQERCKCLNDKVELITNKRNQLQNNVSKIRKELSKEK
VRKRELDDTLLLREKEKDIEELQKKVENLKKKLGDYGDSSLAEQLRSLKKKQEKLDREKD
IAVGRQDGFQAQIFSINEELQSDMYKNAFQRYQHTLISLRTTEMANLDLQKYYAALDFAI
MKYHNLKMKEINKIIRDLWRNTYKGNDIETIEIRSSEDESGIMKTRRNYNYHVVMIKGDA
VIDMRARCSAGQKVLASIIIRLALAETFCINCGILTLDEPTTNLDQENIESLANALVDII
KNRQEQQNFQLVIITHDENFVQILSRLDTDRYYRVKKNENGCSRIKCLSVCNVDSDGDND
SH
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataataataaagatgagtatccaagggatacgtagttttggccctgatgatagt
gataaacaagtcataaagttcttctgccctttgactttgatattaggacagaatggaact
ggtaaaacaactattatagaatctttgaaatatattacaacaggtgacttaccacctgga
actaaaacgaatggtgcttttgtccatgatccaaagattgcccatgagaaagaagttaaa
gcacaagtcaagttatatttcaaagacattattcagaaagatgttattgtatcacgagca
atgataggaacacaaaaggctaaaaaagttgaaacgcgaactttagatggtgttataaca
agaagatctcctgatggagacaagagcctcactcagaaatgtgctgaaataaatagagaa
atgatcacttctttgggtgtctcaaaagcagtattagaaaatgtcattttctgtcaccaa
gaagaggctaactggcctctgagtgaaggaaaagttttaaaggagaaatttgatgctata
tttgcttcaactcgctatgtcaaagccttagaatcaattcgtaaatataaacaagtacaa
gatgcttccataaaagaaaagaaaacagaactaaagtatctgaaagaacacaaagaaaaa
gtcacaaaattcgaaaatgacaaatcagaactggaaggtaggtatgcagcttccaaggat
ttagtgaagaaaatgatggaagagctagaaccaattaaagagaaaatccatggcatcaat
gtacgttctgaagaaatgtacaaactaaggaatgatattgaggttgtccaaactgaaaga
aagcacttacagatatctgttgaggaattaagaaaaaatattgaaactgaatttgaagga
agcactgctgagttgcagacaatgataaataaatttgaagacaacttgcaagaaaaagaa
gactctctttcagagtttaataagaaactcgacaaacttgcaaatgagaatgaaggttat
gaacaagaaaaatccattttgttggtggaggttggcaaactggaccaagaagctgcaaac
aatgaagaaaatatacaaagccgtacagatttggtcatgcaactggctacaaaatataac
attgatgactttgataagaataccattgacaacaagaccacaaaatgttttatagagaag
ttaaataacacccatcaacaattgatgtctgatatcaaaatagaaaagaaaagatttgaa
gagaatgagcaacgtatacagcaagaaatggatggagttaaagaaaaaaaggttcaactt
gaacagagaattaagatggaagaagaaataacgaaaaagaacatagcagaaattcaaaaa
tgtgagtatgccctgcaacaaatggaaagttctgccaaataccttgatgaaatctctgct
gatttgaagtctgctgagaaatcattgaaagctactgaggaatccatcaatgttgctgaa
ctaaagaaagaaattcagaatatgtctcaggagaagaaaactctggaggaacaatttgat
gaacttgatggtcttctaaaaaagctgcatcaacattctactgtacagactcagatcagt
atgttagacaaagagaaaactacaaaagaagaacaaattaaaaaatgtaaatcgcgccat
gaaaccagcattattcatcttttgggagaaatgccacgtaatgatctccgtggaactttg
gaagaatatgtgagcaaacagtcaattagtgtccaaaagtcaactgaaaagttggataaa
ctaaggcaagacttgtccagtaaagaaactcagaagagaatgctcttagaagatatgcgg
aaaagagagaatgaattaaaaaagctggaagaaaagctgcaagatgcttgtggagaggac
acttttgaagatagcttacagaacatacagctaaagctcactcaagtgcaagacctacgt
gggtctttaacgggttcagaacatttttacaagaaatttgttgttgacctgaagaaagat
agtccatgttgtccgttatgtcatcgaggctttgaacaggagcaagaaattcgggaatta
atattagagcttgagaataaattacggatggtcccatctaaactgcgtaaaagtgaggga
gaccttgaacaataccagaatgaatatgacactctacaacagttgaaaccaattaaggaa
aatctgactcttctttctacaactgaactacctgacattaaaaataagttagacagtacc
aacaatgctattgtgaaactgaacaaaagtattcaagaggcagaagaagaccagcaagac
cttatgagtgatgagtccatggctaaaagtatcctgcccgatatcctcatgattgatcgc
tatcttgctgaagtgaaagaactcaacaagaagtcaaggatccagaaatcattgatatct
gatgtagatatggattcccttggtgatcgcagtcttgaggatgtgtctaatgaaaaagac
accatacagtccaagttgcgttccactaatcatgaacttgagcatcaacgacaaaaactt
agcaattattctgataaagtgaacgagctgcacagtcgggttaattcattaaattcagag
aaactgcagattgaaaagaaccttcaagagaagataaagcttgaggagaacaaggctgat
ttacataatcaaaacgtgactcataaggcttctataaagaaactcaaagaagaatcgaaa
cctctacaggctagcatagacaagttagttgatgaaaaggattctgtaaccacacgcaaa
gaagacaaacttgagaaaagaagaaagcaggctgaagaaatccaacagaagggtgtcctt
cagttaaaaaactatatgtcaattattctcaattatgagaaatccggtaaggctgcactt
ctggaagagaagcaggagagatgtaagtgtctgaatgacaaagttgagctgatcaccaat
aaaagaaaccaattacaaaacaatgtgtctaaaattaggaaagagttgtcaaaagagaag
gtgaggaagcgggaacttgatgatactcttctgttacgtgagaaagagaaagacattgag
gaattgcaaaagaaagtagaaaatcttaagaagaaactcggtgattatggtgacagcagt
ttggctgaacagcttcgctcattgaagaagaaacaggaaaaacttgacagggagaaagac
attgctgtaggacgacaagatggctttcaagcacaaattttttcaatcaatgaagaactt
cagtctgacatgtacaaaaatgcttttcaaagatatcagcacacattaattagcttacgg
accactgaaatggccaacttagatttacagaaatattatgctgctcttgactttgccatc
atgaagtaccataacttgaagatgaaagagatcaacaaaattatccgagatctttggaga
aacacatataaaggaaatgatatagaaactattgagatccgctctagtgaggatgaaagt
ggaatcatgaagactcgacgtaattataactatcatgtggtcatgattaaaggagatgca
gttattgacatgagggcaagatgcagtgcaggccagaaggttcttgcctcaataataatc
cggttggctctggctgaaacattctgtatcaattgtggcattcttactttagatgaacct
acaactaatttggaccaagaaaatattgaaagtttggctaatgctttggtggatatcatc
aaaaaccgtcaagaacaacaaaatttccagctggtaattattacccatgatgagaacttt
gtgcaaatacttagtcgtttggatactgatagatattatcgagtgaaaaagaacgagaat
ggatgttctcgaatcaaatgtctatctgtgtgcaatgttgactcagatggagacaatgac
agtcattag
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integrated database retrieval system
