Octopus bimaculoides (California two-spot octopus): 106876215
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Entry
106876215 CDS
T04127
Name
(RefSeq) roundabout homolog 1 isoform X4
KO
K06753
roundabout, axon guidance receptor 1
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
obi04515
]
106876215
Cell adhesion molecules [BR:
obi04515
]
Immunoglobulin superfamily
ROBO family
106876215
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_2
Ig_5
C2-set_3
Cytadhesin_P30
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
106876215
NCBI-ProteinID:
XP_014780163
LinkDB
All DBs
Position
5:72047704..72384261
Genome browser
AA seq
1487 aa
AA seq
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MEDEGDLILSSVEKSDAGDYTCVAVNKAGERESKTAKLTVYEKPRITIQPQDKIVEKSKN
VELECRARGDPKPVITWRREKGQLPPDRFHLLDNGNLLIEEAEVSDDGLYICQVENSVGV
SEAVAKLTVHAVPEFVISPTSKMIGLGRTLSLQCGANGSPIPAIYWRKGIEQDLMFPNRD
LGRFSVDVNGTLHIRQVRFEDAGEYTCHAYNAAGSKDKKVHITVRELDPEIPDDDMRPPP
IINMGPQNQTLQAKTDAVLPCQAHGDPMPTIQWLRNGRPLQMNNPRLMLLGTGSLKISDL
HFSDTATYTCRAVSETGETIWSASLVVPSPEATNVQYHRAPQQNQLPGAPSQPEISSVTD
TTVHLSWRPSIHKGGSPLYEFIVEYFSPQSGNGWVTAADDISLESYTVRKLKPNRNYIFL
VRARNAHGISPPSPLSRMVETQGRRGSAIFTQEEIEQRLRGIVVNLLQGEASGPSAIKVS
WQVMKGHSAIDGFKIKYRRSKHNSEIHTITVQDPTATSYLIENLYSQTWYEICIRAYGGK
VFSQCSNPIKVHTNEGAPAAAPENIVIHWLSDSSMSVRWSPPPRPYRYGDINGYVIRCYG
EDRKDNCSLATNSSVRRVIIERLNPSTTYMLQIAAVTNKGTGTWSQKFYMVPEKPSIMRQ
PWFIGMLIGTIGGTVWIALCIVSIWLCRKKHTQKKLMEQSGMYSIVAAPLQKQEEQARYA
VVPAGYMKWTYQYRNANVLSAELSQKEPQMVGNMAEYHENTLRLCHDPIYQKTLGGVQPD
LTNIMDQNEMKDQNLYNRISMNVPQMKTFYQKPNPVSAVAPYATTTLINTSNLLAKPLQE
SDLSEDDIHYHRIDKVPSDCSQCIHYCHMEPQISSTEVTYKAIVKPERKGSQSAFRPINQ
GYGHHGGSGSSDSCLKPDMGSSDTDNSRPNTDILMDHEIASPGSDSGSYTADETGMPIKR
GRRLYKTCGNIGKQPLVNWAELLPPPPEHPPPCEMISPDSPMGTLHRNIQTMNGGGPISP
VSKISACSCPIQYSQGGLYGRNNPYSDSEQNKYAKIRENHPCSAKTLNQLRTQSPCGDMR
TYSPRTVNCMQHNCMGHAPRCCHSDCEQSIYGPSLKGYRLPSEGEGDYRYISSDPERGPT
PPIRMHSSNMMDLADGPHMDRACQSSLPSLANERMQSPLYPARLEVTASGPHLNIDFEGF
SQNPDSPVSEIPDYAASMVASWASVTDNGNASCNSIRSSAASSSDGSFLTEADYASAVAN
VAELSGLTMFGTTAFDPKSGKKHHPRRHHRATRPTSPYSTDSNFSAVVHKPYPKSQRKKQ
LMEQGNKKLSSNRHHHHHHHHHHQTGHQQPNPEQEPLLAQELSAPPPGVETDVSRYTPTH
NPYSTGVADLPACNKPTYPTPSNPNTNTTTNTSPHGKGHSTTPSSITSEKAKTTAATEAA
DVDAAVVDCSVSSMGSTIPNIRGGNDNDATQTSEINCFNSKHTEPEV
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgagggtgatttaatattgtcttctgtagaaaagtctgatgcaggagattat
acctgtgttgctgtaaataaagctggagagcgagaaagtaaaactgcaaaactcactgta
tatgaaaaaccccgcataaccatccaaccccaagacaaaattgtagaaaaaagtaagaat
gttgaattagaatgccgggcacgaggagaccctaaaccagtcattacatggcggagagaa
aaagggcagcttccaccagatcgatttcatctgctggataatggtaatttgctgattgaa
gaagcagaagttagtgatgatggcttgtacatatgccaggtggaaaattcagttggtgta
tcagaagctgttgcaaaactcactgtgcatgctgttccagagtttgtaatttccccaacg
agcaaaatgattggccttggacggaccctgtctctgcagtgtggagccaatggcagccct
attcctgcaatttactggcggaagggaatagaacaggatcttatgtttccaaatcgagat
ttaggccgattttcagtggatgtaaatggaacattacatattcgacaagtgcgttttgaa
gatgctggcgagtatacatgtcatgcatataatgcagctggcagcaaagataagaaagtt
cacattacagttcgagaacttgatcctgaaatccccgatgatgatatgcgtccacctcct
attattaacatgggcccgcaaaatcagacattgcaggcaaagacggatgctgtattgcct
tgtcaggcacacggcgatccgatgcctacaatacaatggctccgtaatggtcgtcctttg
cagatgaacaatccaagactcatgttacttggaactggatctctaaaaatatcagatctc
catttttctgacactgctacatatacttgccgtgctgttagtgaaactggtgaaactata
tggagtgcatcattagttgtaccaagtcctgaagcaactaatgtgcaataccatcgagca
ccacaacaaaaccagttacctggagctccatcccaacctgaaatcagcagtgttacagat
acaactgtccatctttcttggcgtcctagtatacataaaggtggttcacctctatatgaa
ttcattgtagaatatttcagtccacagagtggaaatggttgggtaacagcagctgatgac
atatcgctagaaagttacacagtacggaagctgaaacccaacagaaattatatattcctg
gtgagagctcggaatgcccatggaattagtcctccaagtcctttatctagaatggttgaa
actcaaggtcgcagaggtagtgcaattttcacacaggaagaaattgagcaacgtttacga
ggaattgttgttaaccttcttcaaggtgaagcatctggaccatctgccatcaaagtcagt
tggcaggttatgaaaggtcacagtgctatagatggtttcaaaattaaataccggcgctca
aagcacaatagcgagatccatacaattacagtacaagacccaacggctacttcatatctt
atcgaaaacctttacagtcaaacatggtatgagatatgcattcgtgcatatggaggcaaa
gtattttctcagtgcagtaatcccattaaggttcacaccaacgaaggagcacctgctgca
gctccagaaaatattgttattcattggctatcagacagtagcatgtcagtgcgatggtca
ccgccaccacgtccttaccgatatggtgacatcaatggatatgttatccgctgctatgga
gaagatagaaaagataattgtagtcttgccacaaactcatccgtacgccgagttattatt
gaacgtttaaatccctcaaccacctacatgttgcagatagcagctgtaacaaacaaaggc
acaggaacatggagtcaaaagttctacatggttcctgaaaaaccatcaataatgagacag
ccttggtttattggcatgttaattgggacaattggtggaactgtgtggattgctttgtgt
attgttagcatttggttgtgtcgcaagaagcacacccagaagaaattaatggaacaaagt
ggaatgtatagcattgtggcagcgcctcttcaaaaacaggaagaacaagctcgatatgct
gttgtacctgctggctatatgaaatggacttatcaatacaggaatgcaaatgttttatca
gcagaactttcacaaaaggaacctcagatggttggcaacatggctgaatatcatgaaaat
acgttaagactatgtcatgatccaatataccaaaagactttgggtggtgttcagcctgac
cttactaacatcatggatcaaaacgaaatgaaagatcaaaacctgtataacagaatcagt
atgaatgttcctcaaatgaagactttctaccaaaagccaaacccagtatctgctgttgcg
ccctacgcaaccaccaccttgatcaatacttctaaccttctggctaaacctctgcaggaa
tccgatttaagtgaagatgatatacattaccatcgaattgataaggtaccttcagactgc
agtcagtgtatacattattgccacatggaacctcagatatcttccacagaagtaacctat
aaagctattgttaaacctgagaggaagggttcccagagtgcatttcgaccaatcaatcaa
ggatatggtcatcatggtgggagtggatcaagtgatagttgcttgaaaccagacatggga
agtagtgacactgataatagtagaccaaatacagacatccttatggatcacgagatagcc
agtcctggtagtgacagcggaagttatacagcagatgaaactggtatgccaattaaaaga
ggtagacgtctatataaaacttgtggtaatattggaaaacagccattagtaaactgggca
gaattactgccacctccccctgagcatcctcctccttgtgaaatgatatcgccggattca
ccaatgggcacactccatcgcaacatccagactatgaatggcgggggccctatatcaccc
gtctccaaaatctcggcatgttcgtgtcccattcagtacagtcaaggaggtctgtatgga
agaaacaacccttattcagattccgagcaaaataaatacgctaaaattcgggagaatcat
ccatgttctgcgaaaacacttaaccaactacgaactcagtctccctgtggtgacatgaga
acatactctcctcgtacagtcaattgtatgcagcacaattgcatgggtcatgccccacga
tgctgtcatagtgactgtgaacaaagcatttatggtccgtctctcaaaggttatcgccta
ccttcagaaggcgaaggagattaccgttatattagcagtgatcccgagcgtggtcctaca
cctccgatcaggatgcactcttcaaatatgatggatttggctgatggaccccacatggac
agagcatgccaatcttctttaccaagtttggcaaatgaacgtatgcaatcacctctctat
ccagcaagactggaggtgacggctagtggtccacatctgaatattgactttgaaggcttt
tctcagaatccagactcgccggtatctgagatcccagattatgccgcttccatggttgct
tcttgggccagtgtgactgacaatggtaatgcaagctgcaatagcattcgatcaagtgca
gccagttcaagtgatggctcattcttgaccgaagcagactatgctagtgctgttgctaat
gttgcagaactttctggactcaccatgtttggaactactgcctttgatccaaagtctggc
aagaagcaccatccacgtcgacatcaccgagcaactcgtcccacaagtccctatagcact
gatagtaattttagtgctgtagttcataaaccttaccccaagtcacagcgcaagaagcag
ctcatggaacaaggtaataagaaattgtcctctaaccgacaccaccaccatcaccaccac
caccaccatcagaccggacaccaacagccaaatcccgagcaggaacccctcttagcacag
gaattatcagctccaccacctggtgtagaaactgatgtatctcggtataccccaactcac
aatccatattcaacaggtgttgcagacctccccgcttgtaacaaacctacctaccccact
ccttccaatccaaacaccaacactaccaccaacaccagcccccacggaaaaggtcactct
acaactccatcgtccatcacttcagagaaagctaagacaacagctgcaactgaagctgca
gatgttgatgctgctgtagttgattgtagcgtatcatcaatggggtcaaccatacccaat
attcgaggtggcaatgacaatgatgctactcagacatcagagataaactgcttcaattca
aagcacactgaaccagaagtatag
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integrated database retrieval system
