Octopus bimaculoides (California two-spot octopus): 106876481
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Entry
106876481 CDS
T04127
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obi04131
]
106876481
Membrane trafficking [BR:
obi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106876481
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
106876481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WDR55
WD40_WDHD1_1st
Lgl_C
Beta-prop_WDR90_POC16_2nd
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Synaptobrevin
Beta-prop_VPS8
WD40_like
Motif
Other DBs
NCBI-GeneID:
106876481
NCBI-ProteinID:
XP_052832425
LinkDB
All DBs
Position
24:complement(13830626..14264474)
Genome browser
AA seq
1372 aa
AA seq
DB search
MSTVMDKMKKFKIKGVLDGLRSSVNTPAKTELDITETLRSEHFEICKTVRHGFPFQPTAL
AYDPVQHILAIGTKSGSLRIFGRPGVDCHCCHPEEAAVIQILFLINEGALVTVCSDDTLH
LWNYRQKRPDIVHTLKFMKERITYCHLPFQSKWFYIGTERGNVHIVNIETFSLSGYVINW
NKAIELSRKTHPGPVVHLEDNPIDPSRLLIGFESGAVVVWDLKNKTAELRFSTPEALRSL
SWWSDGKQFMGSHSDGSLTTWNLKTNLKATNITMPHAKPGKDGKLEPCKPIKKIEWKSVR
GGEPLIIFSGGMPYDKVGRTPSITVMNGKSITVLEMEHNIVDFVVLCETPWQNDFQVPYA
IVVLLQNDLVVVDLTVQGYPCFENPYPMDIHESPVTACQYYADCPPDLIPAFYSVGSKQK
KTGFSENGWPIKGGEWGTTTCSYPEIILTGHADGSVKFWDASAVTLQVLCKVKSAKLFEK
PKCKNSDGSDDDPFAIQMMQLCRESRLLCVAGATHVMLFRFDKQESQHEVVALEIQIIYE
VYDDLDSPDYEYSRPFLGAVHQQQSGSLGSYSSSASDSTKYVQEKKPPLSWSGAISLEYS
TALKVKPSQRRWNPGFQPDIVCLLAWIDNEHPGNVTSICVNSSYGLMAFGNESGLAVVDI
IQKICLLNIGTPDLYGSMDPYQRAPRSPRGKRPQPLDANNTGQIFTDECKSPTSDQFVHY
SLIFQSLLPLASHPRPVSSGSTPCGGEEEEEQQLVHHLPHTQTPQVAIEPTPMTTKSYLS
SESICEKTDSTKDNNETWTIIEVETERSESQTEESVSFHVMPPVKTVPHRTKSNKLPKPS
EAVTPIKRSPSESNIRKRNSPKDDDSVFCSSSSSRNLHENRNCISREAYSDVNLTQSIPD
TNITSPGANCKDSETSILRKMSSSLKALSIKVKGSLLDVGHDTRKYKPPRRFGDIGKVDV
IDLTKENESSHKRHMSRSEIFKGLFVDKNDGSSFSRSRSSSMSSLENVSKEAIQCLKFSD
SYTRKTDSYTCPCLWVGTSLGSVLVIVLNLPSQEQRNFQPVIVSPSGTIFRLKGAILTMS
FLDCNGVLVPDASVQWEDKSKLKIDPRDAQAQKTNAGINYKKVSPTTVLEVSDRQFAIIC
SEKQARVMSLPSQTCAYKVKITETSFVVKSEIVSIKDSVCLACYVANGRIVTFSLPSLKP
LMDAPFQPLTEIRVARTFCFSNNGHAMYLCTPTELQKVTYSAEMRQNLNEMLGDLFLPCE
TPEAPKQGFFKNLFGGGSVTVDREELFGETSGKAAKGMAKFIAGSGGMHHLTAQSTSVGG
EVARTKQLFHERGEKLEGLEDRTQQMTAQAESYSQVAHQLMLKYKDKKWYQF
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacggtgatggataaaatgaagaaatttaaaataaaaggagtgctggacggccta
aggtcgtcagtgaacactccagccaaaactgaattggacattacagaaacattgcgttcg
gaacacttcgagatctgcaagactgtgcgtcatggatttccattccaacccactgcactt
gcttacgaccctgtacaacacattttggcaatcggaactaagagcggatctcttaggata
tttggaagaccaggagtagactgccattgctgccacccagaagaagcggctgtgatacaa
attttatttctaataaatgagggtgcattggtaacagtttgttctgatgataccttacat
ctatggaattaccgacaaaaaaggccagatattgtacacaccttgaaatttatgaaagaa
cgtattacatattgccatttgcctttccaaagtaagtggttttacatcggaactgaacgt
gggaatgtacacatagtgaacatagaaacgttttctttgtctggttatgtaattaattgg
aacaaagcaattgaattgtcacgaaaaacccatccaggcccagttgtgcaccttgaagac
aatcccatagaccccagtaggctcttgataggttttgaatcgggtgcagtggttgtgtgg
gatttaaagaataaaacagccgaattaagattttctacccctgaagcgctgcggtcttta
tcatggtggtcagatggcaaacaattcatgggaagccactcagatggcagtttaacaaca
tggaacttgaaaacaaatctaaaagctaccaatattacaatgcctcatgcaaaacctgga
aaagatggaaaacttgaaccatgtaaaccaattaaaaaaatagaatggaaatcagtgcga
ggaggtgaaccactgattattttctccggtggaatgccctatgacaaagtgggacgtaca
cctagtattacagtgatgaatggaaaaagtattacagtgcttgaaatggaacacaacatt
gttgattttgttgtgttgtgtgaaactccttggcaaaatgattttcaggtaccatatgcc
atagttgtacttcttcaaaatgatttagttgttgtggatctcacagtccaaggctatccg
tgttttgaaaacccttatcctatggacattcatgagtctcctgtaactgcctgccagtac
tatgcagattgccctccagacttaatacctgccttctattctgttggatcaaaacagaaa
aaaactggtttcagtgagaatggatggccaattaaaggtggtgaatggggaacaacaact
tgcagctaccctgagatcattttaactggacatgccgatggctcagtaaaattctgggat
gcttcagcagttaccttacaggttttatgcaaagtaaaatctgcaaaattatttgaaaag
cctaaatgtaaaaattctgatggtagtgacgatgatccgtttgctatccaaatgatgcag
ttgtgtcgcgaaagtcgtttactatgtgttgctggcgctacgcatgtaatgctcttcagg
tttgacaaacaagagtctcaacatgaagtcgtcgcacttgaaatccagatcatctatgaa
gtgtatgatgacttagactctccagattatgaatactcacggccatttcttggtgcagtc
catcaacaacagagtggaagccttggctcctattccagcagtgcatccgatagtactaag
tatgttcaggaaaagaaaccccctctcagttggagtggtgcaatttctttggaatacagc
acagcattaaaggtaaaaccctcccagcggcgatggaacccaggtttccagcctgacata
gtgtgtcttttggcatggattgacaatgagcatccagggaatgtgactagtatatgtgtt
aattcttcctatggcctaatggcttttggcaatgaatctggtctagctgtagtggacata
atccagaaaatttgtttgcttaatattgggacacctgatttgtatggatctatggatcca
taccagcgagcacctcgttctccccgtggaaaaagaccacaacctcttgatgctaataat
actggacaaatatttactgatgaatgcaaatctccaaccagtgaccaatttgtacactac
tcccttattttccagtccctcctccccctggcaagtcatcctcggcctgtgagtagtggc
tctactccctgtggtggtgaggaggaggaggagcagcagctggtgcaccacctcccccac
acacaaacacctcaagtagccattgaaccaactccgatgactaccaaaagctacttatca
agtgagtcgatttgcgaaaaaactgacagcacaaaagacaacaacgagacttggacaata
attgaggtagaaacagaacggagtgaatcgcagactgaagaatcagtcagctttcatgta
atgccaccagtgaagacggtaccacatcgaacaaaatcaaacaaactgcctaaaccaagt
gaggctgtgacgccaataaaacgctccccatcagagtctaatattagaaaacggaactct
cctaaagatgatgattctgtattttgtagtagttcatctagtcgaaaccttcatgaaaat
cgcaattgtatatcaagggaagcttactcagatgtaaatttaacccaatctattcccgac
accaatattactagtcccggtgccaattgcaaagactcagaaacatcaatactacgaaaa
atgagctccagtctgaaagccttatcgattaaagtgaaaggcagcttgcttgatgtagga
catgatactcgtaaatataagccccctcgacgtttcggtgatattggcaaagttgatgta
attgatctcacaaaggaaaatgaatcgtctcacaaaagacacatgagccgaagtgaaata
ttcaagggactgtttgtagataaaaatgatggatcctcattctctcggtcgagaagctcc
agtatgtccagtctcgaaaatgtttccaaagaagcaatccagtgtctcaaattttctgat
tcatatacaagaaaaacagatagttacacctgtccttgtttatgggtcggcaccagttta
ggatccgtcttagtcattgtacttaatcttccttcgcaagaacaaagaaatttccagcct
gtcattgtatctccaagtggaaccatattcaggctaaaaggtgccattcttaccatgtca
ttcttggattgcaatggtgttttagttcccgatgcctcagttcaatgggaagataagtca
aagttgaaaatagatccaagagatgcgcaagcacaaaaaaccaatgctgggataaactat
aaaaaagtgtccccaacgacagttttagaagttagtgatcggcaatttgcaataatctgt
tcagaaaaacaagcaagagttatgtccttaccttctcagacgtgtgcatacaaggtgaag
atcacagaaacttcttttgttgttaaatcagagattgtgtcaatcaaagatagtgtctgt
cttgcgtgttatgttgcaaatggtcgcatcgtaaccttcagtttacccagtctaaaaccc
ttaatggacgctccattccagcctctcactgagataagagttgcacgaaccttctgcttc
agcaacaatggtcatgctatgtatctttgtacgcctacagaacttcaaaaagttacttat
tctgctgaaatgagacaaaatcttaatgaaatgcttggtgatcttttcctgccatgtgaa
actccagaagcacctaaacaaggatttttcaaaaacctatttggtggtggtagtgttact
gttgacagagaagaattattcggtgagaccagtggaaaagctgcaaaaggtatggccaaa
tttattgctggctctggcggtatgcatcatctcacagcccagtctacatcagttggcggt
gaagtggctcgaacaaaacagttgttccatgaacgtggagagaaactggaaggcctagaa
gaccggacacaacagatgactgcacaagctgagagctattctcaggtagcccatcaattg
atgttaaagtataaagacaaaaaatggtaccaattttag
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integrated database retrieval system
