Octopus bimaculoides (California two-spot octopus): 106876864
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Entry
106876864 CDS
T04127
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106876864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obi03009
]
106876864
Ribosome biogenesis [BR:
obi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
106876864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
KNTC1_N
Beta-prop_HPS5
WD_LRWD1
WD40_CFAP43
Motif
Other DBs
NCBI-GeneID:
106876864
NCBI-ProteinID:
XP_014781089
UniProt:
A0A0L8GH92
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Position
15:15037679..15039682
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AA seq
511 aa
AA seq
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MASFKNTFIKQYPRSQEVTADNLYWKLEPAIIKREYGAISFIDFSHFEPYNFAVTNYTRL
HIYNSQTNQIVKTFSRFKQNTYSGCFRSDGNLLVVGGDEGIVRLLGVEKDFRLRTFKGHT
APVHVSRFTADNVRVFSGSDDLTLRLWDVPTETCITTFQEHKDVIRCGANPAASPDIILS
GGYDHLIKMFDTRLQESVLTVDHGYPVESVLMFPSVGLFFSAGGNCIKVWDALAGGKLLK
TISHHHKSITSLGFCSDYKRLLSGSLDRHVKMYDTVSYQVVNTFDYPGPILSVAVSPDDS
VIVAGTTDGLLSIQHRKKETDATTTEPEKRVNKSSYRYRINTGKYVASEKDDLVIANPKK
KFLPKWDKQLKAFKHSSALDSVLDIRVRMKHPEITVSVMQELIRRNVIKSALLGRNERQL
LVLLKFISVNIRNMNFMSTLVDVTNIILDLYSTTFQKSSNCSESLIKFHRLINNELKYLK
ICSETLGMIDLIFAAAELNTTRKENGSGILH
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatttaagaatacatttataaaacaatatccacgttctcaagaagtcactgct
gataacctttattggaaactagaacctgcaataattaaacgtgagtacggggcaatcagt
ttcatagacttttctcattttgaaccgtataatttcgccgttaccaattacacgcgctta
catatttataattcgcagacgaatcaaatcgtaaagactttttctcgattcaaacaaaat
acatacagtggatgtttccgttccgacggcaatcttttagtagttggaggtgacgaagga
attgtacgattattaggtgttgagaaagattttcggttacgaacattcaagggacatact
gcacccgtacacgtgtctcgcttcacggctgataatgttcgagtgttttccggatcagat
gatttaactctgcgactatgggatgtaccaacggaaacttgtattactacattccaggaa
cataaagacgtcatccgatgcggtgctaatccagctgctagtccggatatcatcttatct
ggaggttacgatcacttgatcaaaatgttcgatacgagacttcaagaaagcgttcttacc
gttgatcatggataccccgttgaaagtgtcctcatgtttccttctgttgggcttttcttt
tcagctggtggcaattgtattaaagtgtgggatgctttagccggtggtaagttactaaaa
actatttctcaccaccataaatctattacgtctttggggttctgcagtgactacaagaga
cttctgtctggatctttagacagacatgtgaaaatgtacgatactgtaagctaccaagtt
gtaaacaccttcgattatcctgggcctatactcagtgtagccgtttctccagacgatagt
gttattgtggctggtactacagatggattactgtctatacaacaccgcaaaaaagaaacc
gatgctacaacaacggaaccagagaaacgagttaacaaatcgtcgtaccgatacagaatt
aatactggaaagtatgtcgcctctgaaaaagatgatttagttattgcgaaccccaaaaag
aaattcttacctaaatgggataaacaacttaaggcatttaagcacagcagtgctttggac
tctgtgttggatattcgcgtgcgtatgaaacatcctgaaatcactgttagtgttatgcaa
gaattgatacgtcggaatgttatcaaatcggctttacttgggcgaaatgagcgccaattg
ttagtgttactcaagtttatcagtgttaatatacgaaacatgaattttatgtcaaccctt
gtagatgttacaaacattattttagatctgtattctacaactttccaaaaatccagtaat
tgctcggagagcttaattaaattccaccgattaattaacaatgaactgaaatatctcaag
atatgttcagaaactctaggaatgattgacttaatatttgcagcagcagaacttaacacc
acacgtaaagaaaatggttcaggaattttacattga
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