Octopus bimaculoides (California two-spot octopus): 106877116
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Entry
106877116 CDS
T04127
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03410
Base excision repair
obi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106877116
03450 Non-homologous end-joining
106877116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obi03400
]
106877116
Enzymes [BR:
obi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106877116
DNA repair and recombination proteins [BR:
obi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
106877116
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
106877116
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT_2
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
106877116
NCBI-ProteinID:
XP_014781397
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All DBs
Position
22:complement(37249507..37251674)
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AA seq
583 aa
AA seq
DB search
MASKRKTSSKESPADNKEQKLSRYFPVTSKDRQNHNYSKTEESNRNPRTSLCSKKFLKNV
SLYILSAGIPKIRKDLFASKVVQFGGVILNEFVLGKCSHVLVSETMTLDRALKLLKIEET
SCGLPIVSTLWLSSCLKKESLLPADSFLLNLPRDTEEPSDSVKEVSDHSNIISDPPLKLL
PDEPPPFVTTQEEKNTFIKEKNTFIKEKDHQVRNDANDNEEYIDNSQTDFETNSQVSTQT
VPKGRWVCFESSRNSPVNYNRHITDTLEEMVKTYKSTNDKWRAYSYQKAIGILKREPKEI
TSREEARNLRGIGDSLADKIWEIVQSGRLRKLDEFQSSEQLQVLNLLTNVWGAGPHTAKL
WYQQGYRSLKDLEEKAVLTKQQKVGLRYYDDFLERMSREEVAAIERIVSENTEKVVAGSI
VQVCGSYRRGKETCGDIDILISHPDGESHQGLLSRLLSQLKEIKFITDDLIEIEENGSQR
KYMGVCLSPLSPDHHRRIDIIVAPYSEYACALVHFTGSAHFNRSIRHLAKTKGMSLSEHA
LRTGVVRGSREKLYKGNALPTPTEQSIFDQLGVPYRRPEERDH
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaaacgtaaaacgtcaagtaaagaaagtcccgctgataataaagaacagaaa
ctttctcgatattttccagttacgagcaaagatcgacaaaaccacaattactcgaagaca
gaagaaagtaacaggaatcctcgtacgtctctttgttctaagaaattcttgaaaaatgtg
tctttgtacatcctttcggccggaattcctaaaatcaggaaggacttgtttgcatcgaaa
gttgtccagtttggtggtgtaatactgaatgaattcgttctcggaaaatgtagtcacgtt
ttagtgagtgaaacaatgacgttagatcgagccttgaaactgttaaagattgaggaaact
tcttgtggtttgcccattgtttccaccctctggttaagtagttgtctaaagaaagagtcc
ctcttgcccgctgactcatttctcttgaatcttcctcgggacaccgaggagccttcggac
tctgtaaaagaagtttctgaccactcaaatattatttctgacccacctttaaaattacta
cccgatgaaccacctccttttgtgacaacacaggaagagaaaaacacgtttatcaaagag
aaaaacacgtttatcaaagagaaagaccaccaagtaagaaatgatgcaaatgacaacgaa
gaatatattgacaacagtcaaactgattttgaaacgaattcccaagtttctacccaaact
gttccaaaaggtcgttgggtgtgttttgaatcgtctcggaacagccctgttaattacaat
cgacacatcacagatactcttgaagaaatggtgaaaacttataaaagtactaatgataaa
tggagagcttacagttatcagaaagcaattggaatcttgaagagagaaccgaaggaaata
actagcagggaggaagcccgaaatcttcgtggaatcggcgacagtcttgcagataaaatc
tgggaaatcgttcagagtggacgccttcgaaaacttgatgagttccaaagttccgaacag
ttacaggtattaaacttactaaccaatgtctggggagctggacctcacactgctaaacta
tggtaccagcaaggttatcgtagtttaaaagacctcgaagaaaaagcggttcttactaaa
caacaaaaagttggtttacgatattatgatgacttcctcgaacgtatgtctcgagaagaa
gttgctgcaatcgaaagaattgtttctgaaaatacagagaaggttgtagcagggagtatt
gtacaggtgtgtgggtcttaccgtcgtggtaaagaaacctgtggagacattgatattctt
atctctcatccggatggggaatcccaccaaggtttattgtctcgacttttatctcagctg
aaagaaattaaatttattaccgacgatcttattgaaattgaagaaaacggaagtcaaagg
aaatacatgggtgtttgcctgtctcctctgtcacctgatcatcatcgtcgtatcgacata
attgttgccccctattctgaatatgcttgtgcccttgtccattttacaggttcagcacat
ttcaatcgttccattagacatttagctaaaacgaaaggaatgtctctctcagagcatgcc
ctacgaacgggtgttgttagagggagtagagaaaaactatataaaggaaatgctcttcct
acacctactgagcagtcaatttttgaccaacttggggtaccatatagacgccctgaagag
cgggatcattga
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