Octopus bimaculoides (California two-spot octopus): 106877164
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Entry
106877164 CDS
T04127
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obi03036
]
106877164
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106877164
microRNA pathway
RISC loading complex
106877164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Dicer_dimer
Ribonucleas_3_3
PAZ
Helicase_C
dsrm
DEAD
DSRM_2
Importin_rep_6
PVL_ORF50
AntA
Motif
Other DBs
NCBI-GeneID:
106877164
NCBI-ProteinID:
XP_014781473
UniProt:
A0A0L8GGS1
LinkDB
All DBs
Position
11:7308987..7336684
Genome browser
AA seq
2402 aa
AA seq
DB search
MVKAAYDPVRKLPRYLRTEDLPVHTFTPQTYQLELLDAALHQNTIVCVNSPPGKTFIAVM
LIKEMAIQIRPMVPDIAKRKFTVFLVSSVNVESQAKVVCHHTDLSVGYYTDDTEITVDQA
DKWIPELLTHQVFVTTASVFLNILQCEFLSLNQINLLLIDECSDICVSESHKEVMKIYEK
CEKNLQPRIVVLTAVLLSSKCRDPNELENTINKLESIFHSVAETSTLVFSERHGTSPKEN
VLECNSDFDEIQQMPEVSMILQESLFFIDECILSEKEKENIKDPLQVPRTALAQCLNILD
VLGPWCANHIAEMFIKQLEKIIGHEQSEIGKLLLRYTTTQLRIVTKTFEKLFNIDYCIDE
FLPFLTPKVIKLVNILRGYKPEFEFVILRDENADGMEHSDDDTMDDLSDSDSDDYVNSSH
HKNDLHITLKHPAAARAEYSDSDPLEQEEEKRLCGLIFVDCKYVAYALNKVIEEICAWDE
NMCFVKNGHITGYKYGAKRESTTFRKHEEVLRKFRMQEINVLVATSNFEECIDIPKCNLV
VCFDPPKDYKSYSQSKARARARNASFLMLIDSEKARPFLTELNTYKRIEQVLLRKYINKA
EPSKEELIQTLEQYNIPQSVVLNTNNNTNNNNNNSTSPITLFSAISIVNRYCAKLPSDAF
THLTPKCTVEKVNVDNETHYVATLKLPINSPVKKDVQGDVMPREKLAKMSAALKMCQELQ
IQGELDDHFLPVGKEILKHEEKEALKDPLKYGEEDEVEWEEEEEEELIGCPRPGTTKRKQ
YYFKKAADALINNHVDTNQLCCLYNIHMVLTGPITEEQNTRGRKIYVPENTPRGFGILSL
KNIPQVPCFPVYTRSGEVTVSLDMVESNVSINESQLNKLTIFHRFVFSTVLRLEKDPIDF
MPDEAKVGYLIVPLIEDDSGHHINWNFVNEVQFSFSRNHPDIYDSKREKFKFCTEDFEDA
VVMPSYRNMDQPQHFYVAEIKYDLNPNSPFPSPELYRTFNEYYSKKYGLHITNLEQPLLD
VDHTSARLNLLTPRYMNQKGIALPTSSAETKKARRENLQQKQILIPELCVVHIFPASLWR
KAVCLPAILYRINYLLIAEEIRVKVAQGTKIGVIEIPKGFHFPKLDFGFETNPEKIIDNK
TESEMKVTKAKENGTCTSLSKTAASYSNKLVFKDAKENNELIKNDSENQKDIKEMPVREM
VNNVECKKLNYKKPFIKSNSTESLHKSCNKDDCNRPLKDSNRIQEALNAAAGKNNYERRE
DSVSTSSSRSYNHSDFNNFKSCSVNNSEERKFQPQQFTNKKKHEKDAQWSNDNIKEEKLK
EEKNNKSFSKSPFTNLQNSGRIPNGSKIDFKITFDIAKDLNPKDSLDSFKETSEVPSNVK
FQNDTLKKDLESLDIRLICDNRSYPEGNAFHQMDKQIRKEKKASKTFGQIDDFYQTKSTK
SEMLSSTKIVEITDSEDHHKDNSDKLSNGNCDKSELKNISPTFSPQKAPVCKTSVQNSNN
QAGYPPIVETCKELKNNFNNARLHSSNITIAHSNMDSVKDVEEKLCSNSKGNEENLKTCT
STTFSSNKDQQCNSYTASNSKDSVALHSNSTATAFNPPQEKTLSTTSSDSVSSSSHQLPT
PTSHSLSALPEQQMCNHSNSSNQSVFNCTQSTSSPTDDDKTSSDSEITPCQTGQTVSHTQ
DSTDQPEVAVQDISAPAPLHDRDQRDVEAVSPPIVIHNNNNNNNINVIQSNCPIDAKVPL
SNTNKCITPLSSHDNAICDNTRHNSDTDVFQNITTFSGQSAAVDMSKISDYGQCDDTTNA
NLVYSYAEAQEKLAQSSNTPPLLLDTDIELSCYIGPSPCIILQALTMSNANDFFSLERLE
TIGDSFLKYAITVYLYCQYPGIHEGKLSYLRSKQVSNYNLYRLGRKKGLPERMVSAKFEP
YENWLPPGYVINEDRRRGPVHKVHISSSSNKQDPCSSANQCGSESVEEEILSTSFNNEKL
SSNLNNGMMNFIENDKIPSHVRKANLEQWKFNQELEELKQSQEQDGVSGCGSSTNEKPLV
PYSLQTIHSIPDKSVADCVEALIGCYLTCCGKRAALLFMSWLGLKVLPQKHILQEQYDDN
ITEHQLDELETPLSPLLTHTINAEEVLERLLDGYETFEKEIGYKFSDRSYLLQAFTHASY
HYNTVTDCYQRLEFLGDAILDYVITRHLYEDSQRYSPGVLTDLRSALVNNNIFAALAVKW
NFHKFFKAISPELFNVIERFVARQKEKEDEIDFDEEFQDEGEESPDEEVVEMEIPKALGD
IFESVAGAIYLDSNRSLDVVWKVYYRIMKPQIEKYLKSIPKSPVRELLELEPETAKFEKP
ERTVNGKIRVTVKVAGKGVYNGVGRNYRIAKSAAAKKALRILKTMQSQGFIAQLSNEKMM
QG
NT seq
7209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagctgcatatgatcctgtgcgtaaactgcctcgctatttgcgaacagaagac
cttccagtacacacttttacaccccaaacatatcaactggagttgctggatgctgcctta
catcaaaacacaatagtatgtgtgaattcacctcctgggaaaacatttattgcagtcatg
cttatcaaagaaatggctatacaaataagaccaatggtacctgatattgccaaacgcaag
tttacagtgtttctagtatcgtcagtcaatgtagagtcacaggccaaagtagtctgtcat
catacagacctgtcagtcggttattacactgatgatacagaaattacagtcgatcaggct
gataaatggattccagaactgctgacacatcaagtgtttgttacaacagcttcagttttt
ctcaacattctacagtgtgaattcttatcacttaatcaaataaacctccttcttattgat
gagtgttcggatatctgtgttagtgagtcacataaagaggtaatgaaaatctatgaaaaa
tgtgaaaaaaatttacagcctcgaattgttgtgttgactgcagttttgctgtctagtaaa
tgtcgagaccctaatgaactagaaaataccatcaacaaattagagtccatatttcactca
gttgctgagacatcaactttagttttctctgaacgccatggcaccagccccaaagaaaat
gtgctggaatgtaatagtgactttgatgaaatccagcaaatgccagaagtttctatgatc
ctgcaagaatctctattttttatcgatgaatgtatcctttctgagaaggagaaagaaaat
attaaagatcctctgcaagttcctcgcacagctcttgctcagtgtcttaacatacttgat
gtcctaggaccgtggtgtgccaatcacatagcagaaatgtttattaaacagttagaaaaa
attattggacatgaacagtcagaaattggtaagctgctattacgttacacaacaactcaa
ctcaggattgtgaccaaaacatttgagaagttattcaacattgattattgtattgacgag
tttttaccgtttcttactccgaaagttattaaattggtgaatattctgcgtggttataaa
ccagaatttgagtttgtaattttgagagatgaaaatgctgatggaatggaacattccgat
gatgacacaatggatgatctatctgactccgacagtgatgactacgttaattcatctcac
cacaagaatgacttacatatcactttgaaacaccctgctgcagctcgagcagagtattcc
gactccgatcctttggaacaggaagaagaaaagagattatgtggacttatttttgttgat
tgcaaatacgttgcatatgctttaaataaggtaattgaagagatctgtgcatgggatgaa
aatatgtgctttgttaagaacggacacatcactggttataagtatggagctaagagagaa
tccacgactttccggaagcatgaagaggttttacgtaaattccgtatgcaagagatcaac
gtactggtagcaacttctaactttgaagaatgtattgacataccaaagtgtaatttggtt
gtttgctttgatccacctaaagactacaagtcatatagtcagtcaaaggctcgtgcacgt
gctcggaatgcaagtttcctcatgctaattgatagtgaaaaagcacgaccatttttaaca
gaactcaatacatacaaaagaatagaacaggttttattgcgaaaatacataaataaagct
gagccttccaaggaagaactaatacaaacccttgaacaatacaacatcccacagtcggta
gttttaaataccaataacaacacaaacaacaacaacaacaattctacttctcccattaca
ctgttttcagccatctctattgttaacagatactgtgctaagttacctagtgatgccttt
actcacctcacacccaaatgcactgttgaaaaggtcaatgttgataatgaaacccattat
gttgctactcttaaactaccaatcaattctccagtgaagaaagatgttcaaggagatgta
atgccaagagaaaagttagccaaaatgtctgctgcgctcaaaatgtgccaagaactccaa
attcaaggagaactagatgatcacttccttccagtggggaaagagattttgaagcatgaa
gagaaagaagccttaaaggatcctctgaaatatggggaagaggatgaggtagagtgggaa
gaagaggaagaggaggaactcattggctgtccaagaccaggcaccacaaaacgaaaacag
tattactttaaaaaggctgcagatgctctgattaacaaccatgttgatactaaccagctt
tgttgcttatataatattcatatggtactgactggacctatcacagaagagcaaaataca
cgtggaaggaagatctatgttccagaaaacacaccaagagggtttggaatcttgtccttg
aaaaacattcctcaggttccatgttttccagtatatactcgttctggagaggtaactgta
tctcttgatatggttgagtcaaacgtatcaataaatgaaagtcagctgaataagctgaca
atttttcatcgatttgtgttcagcacagtacttcgactggagaaggatcctattgacttt
atgcctgacgaagcaaaagtcggttatcttatagtacctttgatagaagatgacagtgga
catcatattaactggaattttgtgaatgaagtccagttttccttcagcagaaatcatcct
gatatatatgattcaaaaagagagaaatttaagttttgcactgaagacttcgaagatgca
gttgtgatgccttcgtatcgcaacatggatcaaccacagcatttctatgttgctgagatc
aaatacgacctgaatccaaacagcccgtttccttctcctgagctttataggacatttaat
gagtattactctaaaaaatacggtcttcatatcactaacttggaacaacctttattggat
gttgaccatacttctgcacgtctgaatttattaactccacgttacatgaatcaaaaaggc
atcgctttgccaaccagcagtgcagaaaccaagaaagcccgtcgagaaaacttacaacaa
aaacaaatcttgattccagaattgtgtgtggttcatatcttccctgcttctctgtggcgt
aaagctgtgtgtcttcctgctattctttacagaataaactatcttttgattgctgaagag
attcgtgtcaaagttgcccaaggaaccaaaattggtgtcattgaaattccaaaaggcttt
cactttcctaaacttgattttggttttgaaaccaatccagaaaagattattgataataaa
actgaaagtgagatgaaggttacaaaagccaaggaaaatggaacctgcacatctttgtca
aagactgctgcaagttatagtaacaagcttgtatttaaagatgctaaagaaaacaatgaa
ttaataaaaaatgattcagaaaatcagaaagatatcaaagaaatgccagtaagagaaatg
gtaaataatgttgagtgcaagaaattaaactataaaaagccttttataaagagcaattca
acagaatctctacataaaagctgcaataaagatgactgcaacaggcctttgaaggattct
aatagaattcaagaggctcttaatgctgcagcgggaaagaacaactatgagcggagagaa
gattccgttagtacctcatctagcagaagttataaccattcagattttaacaattttaaa
tcctgctctgtaaacaacagcgaagaaaggaaatttcaacctcaacaatttacaaataag
aaaaagcatgaaaaagatgcacaatggtcaaatgataacattaaagaggagaaactcaaa
gaggaaaagaataataagtctttctcaaaatctccttttactaacctgcaaaattctggt
agaatacctaacggcagtaaaatagattttaagataactttcgatattgcaaaggatttg
aatcccaaagacagtcttgattcctttaaagaaaccagcgaagttccgtctaatgttaaa
tttcagaatgacactctaaagaaagatctagaatctcttgatattcgtttgatttgtgat
aacagaagctatcctgaaggaaatgctttccatcaaatggataagcaaattcgaaaagaa
aagaaggcttctaagacatttggccaaatagatgacttttatcaaacaaagtcaacaaag
tctgaaatgctgagttctacaaaaattgtagaaattacagattccgaagaccatcataaa
gacaatagtgacaagctttctaatggcaactgtgataaaagtgaattgaaaaacatatct
cctacttttagtccacagaaagctcctgtgtgtaaaacctctgtgcagaattctaataac
caagcaggttatcctccaattgtagaaacttgtaaagaattgaaaaataattttaataat
gctcgtcttcattcttcaaacataaccatcgcccatagcaacatggattccgtaaaagat
gtggaagaaaaactttgcagtaactcaaaaggaaatgaggaaaatttaaaaacttgtaca
tccaccactttctcttcaaataaagaccaacaatgtaattcatatacagctagcaattca
aaagatagtgttgcactacactctaattccactgccacagcatttaatcctccccaggag
aaaactttatcaacaacatcttcagactctgtttcttcatctagtcatcaattaccaaca
cccacttcccattcattatcagcgctaccagagcagcaaatgtgtaatcattctaattca
tcaaatcagtctgtatttaattgtactcagtctacttcttcaccaacagatgatgacaaa
acatcctcagattcagagatcactccatgtcagactggacaaactgtttcccacactcag
gactctactgaccaaccagaggtagctgtacaagatatctctgctccagcacctttacat
gatagagaccaaagagatgttgaagctgtttcaccacccatagtcatacataataataac
aacaacaacaatatcaatgtcattcaaagcaattgccccattgatgcaaaagtacccctc
tctaacacaaacaaatgcatcactcctttgtcctctcatgataacgccatctgtgataat
acaagacacaattccgacaccgatgtctttcaaaatataacaacattcagtggccagtca
gcagcagtagatatgtctaaaatatctgactatggccaatgtgatgacacaaccaatgca
aaccttgtttacagctatgctgaggctcaggagaaacttgctcagtcttcaaacactcca
cctctcttgttagatactgatattgaactgagttgttacattggtccaagtccatgcatt
attttgcaggcgcttaccatgtcaaatgcaaatgattttttcagccttgagagattagaa
accattggcgattcctttcttaaatatgctatcactgtttacctttactgtcaataccca
ggtatccacgaaggaaagttaagctatctacggagtaaacaagtaagcaattataattta
tatcgtcttggtcgtaaaaagggtcttcctgagagaatggtttcagctaaatttgaacct
tatgagaattggctcccacctggttatgttattaatgaagatcgtaggcgcggccccgta
cacaaagttcacatttcttcaagcagcaacaagcaggacccttgttcatctgcaaatcaa
tgtggaagtgaatcggttgaagaagaaattctatcgacatcttttaacaatgaaaaatta
tcatcaaatctaaacaatggcatgatgaacttcattgaaaatgacaaaattccaagtcat
gtacgaaaagcaaatttagaacaatggaaattcaaccaagaactggaagaattaaaacaa
tcacaagaacaagatggtgtcagtggttgtggtagttctacaaatgaaaagccacttgtt
ccatatagcttgcaaacaattcatagcattccagacaaaagtgtagcagactgtgttgaa
gctcttattggttgctatctgacttgctgtgggaaaagagctgctcttcttttcatgtca
tggcttggtctaaaagtgcttcctcaaaagcacattttgcaggagcaatatgatgataat
atcactgaacaccaactggatgagctggaaactcctctgtcaccactccttactcataca
attaatgctgaagaagttcttgaacgtttacttgatggctatgaaacttttgagaaagag
attggctacaaattctctgatcgatcttatctactacaagctttcacacatgcatcgtat
cattacaatacagtgactgactgctaccagcgtctggaatttttaggtgatgcaattttg
gattacgtgatcactcgccatctttacgaagattctcagcgttattctcctggggttctc
actgacctgcgatcagctctagtcaataacaacatttttgctgcattagctgtcaaatgg
aacttccataagtttttcaaagccatatctccggaactgtttaatgtgattgaaaggttt
gttgctcgccaaaaggaaaaggaagatgaaattgattttgatgaagaattccaagatgaa
ggagaagaaagtcccgatgaagaagttgttgaaatggaaattcccaaagcacttggtgat
atatttgagtctgttgctggtgctatctatcttgacagcaacaggtctttagatgtggtc
tggaaagtttactatcgtataatgaagccacaaattgagaaatatttgaaaagtattcca
aagtcacctgtacgagaattattggaactggaaccagaaactgctaaatttgagaaacct
gagaggacagttaatggtaaaatccgagttacagtcaaagttgccggtaaaggtgtttat
aatggtgtcggacggaattatcgcattgcaaagagtgctgctgccaaaaaagctttgaga
atccttaaaactatgcaatcacaaggcttcattgctcaactatcaaatgaaaagatgatg
cagggataa
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integrated database retrieval system
