Octopus bimaculoides (California two-spot octopus): 106877252
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Entry
106877252 CDS
T04127
Name
(RefSeq) ecdysone receptor isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obi03000
]
106877252
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
obi03310
]
106877252
Transcription factors [BR:
obi03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
106877252
Nuclear receptors [BR:
obi03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
106877252
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
106877252
NCBI-ProteinID:
XP_052826071
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Position
8:53794902..53941985
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AA seq
767 aa
AA seq
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MEANFGLAYDICNMLCNDLDDIPDLNNGSGQISTVSTTTSNNKTKVPEMKIKEEPQLTSN
PAQSAMDSQTSAAQLHQCLPSIQSAGTSLQQQTPSQQQQQQSSLISMHSPVQQPQTMQHM
QSLQQFPQQHQMHLQPMLSPHHPMHISNDVVTVHQVSPNSQLSPPQQQQAPLTPSPTMQT
PQTLPSPSSSSSSDIISSELVRHIAVIHPTHNRHPNLPPPPPPPAPPIEQFQQQMNLEDF
KDFSMIQQQQQQQQQQQQKQQQQQQKPQQQQQQQQQQNQQQQQNQQKQQQQQQQQKQQQQ
QKQRFQHMYHHHHHHHHHHHHQQQQQQLQDHSRIQNQFAQSTSSPGSRENNGSIYETRHH
FDNGGAVGGMANKPPPSPPLAPRIYKPCVVCNDKSSGYHYGVSSCEGCKGFFRRSVQKNM
HYSCLKMKNCEIVRTSRNRCQYCRLQKCFKMGMSKEAVRSDRNKKKKAKPANGTHSIHIE
ELTESEKTLLEDLVSYHQQTYIKTKKNKHIYLTMSNMSVSKLVEGNEISAIENKHQDNGQ
KLGTENGLGEDASKPQEKHTNCKLFNNKVESIIDFSNEAALKIIEFSKRVPGFKDLNIKD
RVTLTKSACLEIMYLRMSHRYDADRDVIAFEGDDYLTREDFNEMGFSTITNSIFKFAADF
KDLGLDDRELATLTYVVLVSGDRCDLNEPERVEELQGPLLDLLRKYSRLNHEHDPNVFPK
TLLKLTSLRSLSLQSAIHILNNQSVHNLNSPLIVEMLDREENINLPS
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaaatttcggattagcatatgatatatgcaacatgctgtgcaatgaccttgat
gacataccagatttaaataatggttctggtcaaatttccactgtgtctactacaacatca
aataacaagacaaaggtacctgaaatgaaaatcaaagaagagccacaactgacctcaaac
ccagcacaaagtgctatggattctcaaacttcagctgcccagctccatcaatgcctgcca
tcaatccagagtgcagggacttctcttcaacagcaaacaccatctcagcaacaacaacag
cagtcctccctcatatcaatgcactctcctgttcagcagccacaaacaatgcaacatatg
caatcactgcaacagtttcctcaacagcatcagatgcacttgcagccaatgctgtcccct
catcacccaatgcatatcagcaatgatgttgtcactgttcatcaagtctcaccaaattct
caactttcgccgccacagcagcagcaagcgccactgactccatcacctaccatgcagacc
cctcaaactctgccaagcccgtcgtcttcttcctcttcagacatcatatccagtgagctg
gtgcggcatattgctgtgatccacccaacacacaacagacaccccaacttgcctcctcct
ccgccaccacctgctccacccattgaacagtttcagcaacagatgaaccttgaagacttc
aaagatttcagtatgattcaacaacaacaacaacaacaacaacaacaacaacaaaagcag
cagcaacaacaacaaaaaccacaacagcagcagcagcagcaacaacaacagaatcagcag
cagcaacaaaatcagcaaaagcagcagcagcaacagcaacaacaaaaacagcagcagcaa
cagaagcagaggtttcaacatatgtaccaccaccaccatcatcaccaccatcaccaccac
catcaacagcagcagcagcaactacaagatcattctagaattcagaaccaatttgctcag
tccacttcttctccgggttctcgtgaaaataacggatcaatttatgaaactcggcaccac
tttgacaatggtggtgctgttggtggtatggccaacaagccaccaccttctccaccactg
gcccctcgtatttataaaccttgtgttgtctgtaatgataaatcatcaggatatcactat
ggtgtcagctcctgtgaaggttgtaagggcttcttccgacgcagtgttcagaagaatatg
cactattcatgtcttaaaatgaaaaactgtgaaattgtacgaacctcccgcaaccggtgc
caatattgccgtctacagaaatgtttcaagatgggaatgtccaaagaagctgtacgcagt
gatcggaacaaaaagaagaaagcaaaaccagcaaatggaacacattccatacacatagag
gaattgactgagagtgagaaaactctgttggaagatttggttagttatcatcagcagact
tacatcaaaactaagaaaaataaacatatatatttaacaatgtcaaatatgtcagtgtca
aaattggtggaaggcaatgagatttcagcaatagagaacaaacatcaagataatggccag
aagttgggaacagagaatggcttgggagaagatgctagtaaacctcaagaaaaacataca
aactgcaaacttttcaataataaagtggaaagtataatagatttttccaatgaagcagct
ttgaagattattgagttctccaagagagtaccaggattcaaagatttaaacatcaaagat
cgtgtcactcttaccaaatctgcttgcctagaaataatgtatttacgtatgtcacatcga
tacgatgcggaccgagacgtgatagcttttgaaggcgatgattatctaactagagaggat
ttcaatgaaatggggttcagtacaatcactaatagcatcttcaaatttgctgcagatttt
aaagatttaggtcttgatgacagagagctggccacattgacatatgtggttttggtcagt
ggtgatcgctgtgatttgaatgaaccagaacgtgtagaagagttgcaaggtccattgctt
gatttgttgaggaaatattcacgtttaaatcatgagcatgatcctaatgtctttccaaaa
acccttttgaaattaacttcacttcgatcattgagtttgcagagtgccatccacatctta
aacaatcaaagtgtacacaacctgaactcacctttaattgtggaaatgcttgaccgtgaa
gaaaatatcaacttgccatcttag
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