Octopus bimaculoides (California two-spot octopus): 106877440
Help
Entry
106877440 CDS
T04127
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obi03021
]
106877440
Transcription machinery [BR:
obi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
106877440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_8
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_11
TPR_10
TPR_7
TPR_6
TPR_Slam
ARM_TT21_5th
ANAPC3
TPR_9
ARM_TT21_4th
TPR_MalT
NatA_aux_su
ARM_TT21_C
ARM_TT21_2nd
TPR_EMC2
TPR_21
Peptidase_S41_N
HEAT_Nup120
TPR_BSK1_C
TPR_4
DUF3322
HAT_PRP39_C
DUF6584
Motif
Other DBs
NCBI-GeneID:
106877440
NCBI-ProteinID:
XP_052832629
LinkDB
All DBs
Position
25:26466408..26492977
Genome browser
AA seq
733 aa
AA seq
DB search
MSAGSIEIPLRDTDEVIELDLDQLPDGEEVLNILRQEIAPLNIWVNLALEYYKQGFIEDF
VKILEASRADASYDYPNYEKDQMRALDTLAAYYVQQAHKEKNKEKKRDLFTQATLLYTTA
DKVIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSSNNIPSLLGKGCIAFNKKDYR
GALAYYKKALRTNPSCPASVRLGMGHCFVKLGKLEKAKMAFERALFLDPQCVGALVGLAI
LKMNAKTQDSIKTGVQLLSKAYTIDSTNPMVLNHLANHFFYKKDYQKVQHLALHAFHNTE
NEAMRAESCYQLARAFHVQGDYDQAFQYYYQSTQFAPTSFVLPFFGLGQMYIYRGDNENA
ALCFEKVLKAQPGNYETMKILGSLYANSEDVAKRDTAKQHLRKVTEQFPEDVEAWIELAQ
ILEQTDVLGALSAYGTATRILKDKVQADVPPEILNNVAALHFRIGNFMESKKYYEASLER
SRHEAQHDETYYSAISVTTTYNLARLYEATHEYDKAEKLYKNILREHPNYVDCYLRLGCM
ARDRGQIYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERIIQRPNTKDD
SYSLIALGNVWLQTLHQPIRDKDKEKRHQDRALAMYKQVLRNDARNIWASNGIGCVLAHK
GCINEARDIFAQVREATADFCDVWLNIAHIYVEQKQYVAAVQMVSSDETTSFFFLYVFYV
FCKSNLVHPPQTT
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggatctatcgagattcctctccgtgatacggacgaggtgattgagttggat
cttgaccagttgcctgatggtgaagaagtattgaatattcttcgacaagaaattgcccca
ttaaacatttgggtcaatttagctctggaatattacaaacaaggttttatcgaagacttt
gtcaagatacttgaagcttctcgtgccgatgccagttatgactatccaaattatgaaaaa
gaccagatgcgagcactggacacccttgctgcgtactatgtgcagcaggcacataaggag
aagaacaaagagaaaaagagggacctgttcacccaggccaccctcttgtacaccactgct
gacaaagtcatcatgtacgatcagaaccatcttttgggtcgagcgtatttctgtttgctg
gaaggtgataagatggagcaggctgatgctcagtttaactttgtacttaaccagtcaagc
aacaacattccgtctctcctcggtaaagggtgtattgctttcaacaagaaagactaccgt
ggagctcttgcctactacaaaaaagccctaagaaccaaccccagttgccccgcttctgtg
agactgggtatgggacattgctttgtaaaacttggcaagcttgaaaaggcaaagatggcc
tttgagcgtgcccttttcctcgacccccagtgtgtcggtgccttagttggacttgctatc
ctcaaaatgaatgctaaaactcaagattcaattaaaacaggagtgcagttattgtcaaaa
gcttacacaattgactcaaccaatccaatggttttaaaccatttggctaaccatttcttt
tataaaaaggattatcagaaagtgcaacatcttgccctccatgccttccataatacggag
aatgaagcaatgagggcagaaagctgctatcagctggcgagagctttccatgtccagggt
gattatgaccaagctttccagtattactatcaatcaactcagtttgcacccaccagcttt
gtacttccattctttggccttgggcagatgtacatctaccgtggtgacaatgaaaatgcc
gccctgtgttttgagaaagtcttaaaagctcaacctggaaactatgaaactatgaaaatt
ttaggctctctttatgccaattccgaagatgttgccaagagagatactgccaaacaacac
ctccgcaaggtcactgaacagttcccggaggatgttgaggcctggattgaattagctcag
attctggaacaaactgatgtcttgggtgccctttcggcgtatggcactgccaccagaatt
ctgaaagataaagttcaagctgatgtgccacccgagattcttaacaatgtggctgcctta
cattttagaattggcaatttcatggaatccaagaaatattatgaagcttcacttgaacgc
tcccgacacgaagcacagcacgatgagacatactacagcgccatctcagtaaccacaacc
tacaacttggcgcgactctacgaagcaacccacgagtacgataaagcagagaaactgtac
aagaatattctgagagagcatcctaactatgtcgattgttacctgagattaggttgcatg
gcacgagatcggggacaaatctatgaagcatctgattggttcaaagaagccctacagata
aaccaggatcatccagatgcctggtctttaattggaaaccttcatttagccaaacaagag
tggggccctgggcagaagaagtttgaacgaattatccagagacctaacaccaaagatgac
tcttattcgcttattgctcttggcaatgtctggctacaaactcttcatcagccaatcaga
gacaaagacaaggaaaaacgacaccaagaccgagctttggctatgtacaaacaggtacta
agaaatgatgcacgcaatatttgggcttcaaatggaattggttgtgttcttgcccacaaa
ggctgcatcaacgaagccagagatatatttgctcaagtccgtgaggcgactgctgatttc
tgtgatgtctggcttaatattgcccacatttatgtggaacagaaacagtatgtagctgca
gtacaaatggtcagttctgatgaaacaacttcttttttttttttatatgtattttatgtt
ttttgtaaaagtaacctggtacatccaccccagaccacatag
DBGET
integrated database retrieval system
