Octopus bimaculoides (California two-spot octopus): 106877726
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Entry
106877726 CDS
T04127
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106877726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106877726
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106877726
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
106877726
NCBI-ProteinID:
XP_014782176
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Position
13:52624940..52645017
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AA seq
526 aa
AA seq
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MDATAPPTVDGVEDDDAWLYGDSESKENSEPPPTSDGRNDADESVKSEGSVKESSPPSAT
NGSSQAKPKDPDDKEAGELSGEEDLGDRKEDDDSDDDDLVQVTIGDIKSGPSVYETPRIF
KQGTGYNKSSSGTSGLNKPQGKGIDLEAVGTNNGVPTYDFDFDSLQAEDKPWRKPGADIT
DYFNYGFNEDTWQQYCEKQRRLRMENQTNKIMVHHAGAPTPVVNSRSTPEEKPAVLNNAG
NTPVSLLGKRAAPPPNRKMSGTIDVIGTTARDSRRPAQSANNSEPIPTTDSNDYRKPYSG
VAPSGIQPHHPHLAQIPEYGLPPPGMPPPGMPPPGMPPPPGVAMIPPAFPVPPPTTDGYD
SYYQPQNQPSDRNSSYEERQSYNYDNNHPYSNTYSNPPPHWENRHPTSQSTHRSNNFERW
DYNRDRSPQRESDYNRSGYRRDRERERDRERDRSWSRDRERTREHRHRDREDRHRSRRKH
RDEEETNEHHRSKHKKAKKSKREKEEEGNDSSGLAVGGNVPPEDVP
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaactgcgccgccaacagttgacggagttgaagacgacgatgcctggttgtat
ggagattctgaaagtaaagaaaattcagaacctcctccaactagtgatggcagaaacgat
gctgatgaaagcgtaaaatctgaaggctcagtaaaagaaagtagtcctccatcggcaact
aatggatctagtcaggccaaacctaaagaccctgatgataaggaagcgggagaattgagc
ggagaagaagatcttggtgaccggaaagaagatgacgattccgatgatgatgatttggtc
caggttacgattggtgacatcaagtcaggaccatcagtctatgagacaccaagaattttc
aaacagggcactggttataacaaatcttcctcaggaacaagtggcttaaacaaacctcaa
ggaaaaggaattgatttggaagctgttggcacaaataatggtgttcctacatatgacttt
gattttgatagccttcaagcagaagataaaccttggaggaagcctggtgctgacataact
gactatttcaattacggtttcaatgaagacacttggcaacagtactgtgagaaacagcgg
cgattacgtatggagaatcaaaccaacaaaataatggttcaccatgctggtgctccaaca
cctgttgttaactcccgaagtacacctgaagaaaaaccagctgtattaaacaatgctggc
aatactcctgtaagtttactgggtaagcgagctgcacctcctcctaacagaaaaatgtct
ggtacaatagacgtgattggaactacagctagagactcaagaagaccagctcagtcagct
aataatagtgaacccataccaaccacagattccaatgattaccgcaagccatattctgga
gttgcaccttctggtattcaaccgcatcatccccatttggcacaaattcctgaatatgga
ctacctccacctggcatgccaccccctggtatgccacctccaggtatgcctccacctcca
ggagttgcaatgatccccccagctttcccagtacccccacctacaactgatggctatgat
tcttattatcagccacagaaccaaccatctgatcgcaattctagctatgaggaacgacaa
tcctacaactacgataacaaccatccatattccaatacatattcaaacccacctccacac
tgggagaacaggcatcccacaagtcagtccactcacagaagcaacaactttgagaggtgg
gactataacagagaccgtagccctcaacgagaatctgattacaacaggagtgggtaccgc
cgtgaccgtgaaagagaacgggatcgtgagagagacaggtcttggtcaagagatcgtgaa
cgcactcgagaacacagacatagagacagagaagacaggcaccgttcacgcaggaaacat
cgggatgaagaagagacaaatgaacatcaccgttctaaacacaagaaagcaaagaagtca
aaacgagaaaaagaagaggagggtaatgatagctcaggcttagctgtaggaggaaatgtc
cctcctgaagatgttccttga
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