Octopus bimaculoides (California two-spot octopus): 106877779
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Entry
106877779 CDS
T04127
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obi04131
]
106877779
Membrane trafficking [BR:
obi04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
106877779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
SGL
EGF_CA
hEGF
EGF_3
Sigma_reg_N
Chordopox_A13L
Orf78
ETRAMP
Motif
Other DBs
NCBI-GeneID:
106877779
NCBI-ProteinID:
XP_014782273
EnsemblRapid:
LOC106877779
UniProt:
A0A0L8GCJ0
LinkDB
All DBs
Position
13:308524..348175
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AA seq
975 aa
AA seq
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MKLLSHLFSYYFILTFLTLFIFLQATSAVTPDCDSNKFNCGDGTCIALNALCDSFEDCDN
GSDEHNCFNATCGPTESSCDNGQCIPQKWVCDEEIDCNDRSDENPKTCAERKCPDDHFSC
ENGLCITVDWLCDGQNDCPNGLDEKNCVQDKCLAKEFRCSNGDCINNGWVCDGENDCVDE
SDEKGCEPRTCQPDEFECDTHTCINPSWICDGDGDCSDNTDENNCTTISNECTSLDFICK
NEICITKSWKCDGDEDCLDGSDEVDCTHTCDNDHFLCEESKECLHKLLKCDGSVDCESGS
DEKDCGSSGNTCTDRTFDCYGDKKKCIPWNKVCDFRNDCGNWQDENDELCQEKYPCKDDN
GGCQQQCISLRHMHRCDCLAGYKLVGNSSCQDVDECEIFGTCSQLCENHIGSYKCSCLQG
YELHDRNSCKTVGPRPWLIVSNKADVRKLQLGTHKYKLIHSKSDNAIALDFDYSEGMVYW
TDITQEKILRAPFDADDAVNSSETVIGTGLKHPDGLAVDWIHHNVYWTDTGLTKIFVANK
SGHHVKTLIEEGLREPRAIAVDPKRGWFYWTDWGYPASIQMCGMNGKHSRKIVVNIQWPN
GLTIDYENQRLYWIDAKLRKIESSNLNGGQRITILSSRRYILFPFAITVFEDTLYWTDRN
SESICQANKFTGEHFERLGLQLREPMDLHVYHHTRQPSSTSHCGPNNGGCAHLCLPDPHD
DGDTTYTCVCADGYMSLRNGRECVHQGPFDIAANSSTVLTKSNVSLTSNTTTTTTSTTPP
SPPPIKINDSTTVTTPPTTTSIITLHPLKENNTHTQPATAVTNISTLSNDSGNTIQSVTK
PSHTTTSKSRGIVPSTRTLVRSSTITPTTPGDNQSNSDSSITQASTGNSLNQTTPVVIQK
PKETGKITGIVTTVLILILIILIVITYVSYKAYRKKRTKHMNFDNPVYRKTTEDRIMLER
NTSNQLPATLQPLTA
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgctatctcatcttttcagttactatttcattttaacatttctaacattattc
atctttcttcaagctacatcagctgttacacccgattgtgattcgaataaattcaactgc
ggggacgggacgtgtattgcgttgaatgcattatgtgacagcttcgaagactgtgataat
ggatcggacgaacacaattgttttaacgcaacgtgtgggcccacagagtcttcttgtgac
aatggacagtgcattccgcaaaaatgggtttgtgatgaagaaatagattgtaatgacaga
tctgatgagaaccctaaaacctgcgctgaacgaaaatgtccagatgatcatttttcttgt
gaaaatggtttgtgtatcacagttgactggctatgtgatggacaaaacgattgcccgaat
ggattggatgaaaaaaactgtgttcaagacaagtgtcttgcgaaggaattccgctgtagc
aatggtgactgtatcaacaatggatgggtttgtgatggagaaaatgattgtgtagatgag
tcagatgaaaagggctgcgaacctcgtacatgccagcctgacgaatttgagtgtgacact
catacttgtataaatccaagctggatatgtgatggggacggagactgttctgacaatacg
gatgaaaataactgtactacaatcagcaatgaatgtacaagtctagattttatttgcaaa
aatgaaatttgtatcactaaatcctggaagtgtgatggtgatgaggactgtctagatgga
agtgatgaggtcgattgtacgcacacctgtgataatgaccattttctttgtgaagaatca
aaagaatgtcttcataaactacttaaatgtgatggttctgttgattgcgaaagcggttct
gatgaaaaagattgtggctcctcgggaaatacatgtacagatagaacatttgattgttat
ggtgataaaaagaaatgtattccatggaataaagtgtgtgatttccgtaatgattgtggc
aactggcaagatgaaaatgatgaattatgtcaggaaaaatacccctgcaaagatgataat
ggtggatgtcaacaacagtgcatttctttgcgtcatatgcaccgctgtgattgtttggct
ggttataagcttgttggcaactcctcttgtcaggatgtagatgaatgtgaaatctttgga
acttgctcccaattatgtgaaaaccatattggctcctacaaatgtagttgtctacaaggt
tatgagcttcatgatcgaaattcttgcaagacagttggtcctcggccttggttgattgtg
tcgaataaggctgacgtgcgtaaattacagcttggaacccataaatacaaactaatacat
tcaaaaagtgacaatgccattgctcttgactttgactattcagaagggatggtttactgg
actgacattactcaagaaaagattttgagagctccatttgatgcagatgatgcagtgaat
tcatcggaaacagttattggaactggcctgaaacatccagatggcttggctgttgactgg
atccaccacaatgtctactggactgatacaggattgacaaaaatttttgtagcaaataaa
tcagggcatcatgttaagacattgatagaagagggacttcgtgaaccaagggctatagct
gttgatcctaaaagaggttggttttattggactgattggggatatccagcttcaattcaa
atgtgtggcatgaatggaaaacattcacgaaaaattgtagtaaatatacagtggccaaat
ggtttaacaatagattatgaaaatcaaagattatattggattgatgccaagttaagaaaa
attgaaagctctaatctgaatgggggtcagcgtataactattctcagcagccgaagatat
attttgttcccttttgctataaccgttttcgaggatactctgtattggactgatcgtaac
agtgaatcaatttgccaagcaaataaatttactggagaacattttgaaagattagggcta
caacttcgtgaaccaatggacttacatgtctatcatcatacacgacaaccttcatctaca
agtcactgtggccccaataatggtggatgtgcacatttatgtttgcctgaccctcacgac
gatggagatacaacgtacacatgtgtctgtgctgatggttatatgtcattaagaaacgga
cgtgaatgtgttcaccaaggtccttttgatattgctgctaacagttcaactgtactgact
aaatctaatgtttctcttacatctaatactactactactactactagtactactcctcct
tctcctcctcctattaaaataaatgattccactactgttactactcctcctaccaccact
tctattattactctccatcctcttaaagaaaataacacacatacccaaccagcgactgct
gttactaacatctctactctctctaatgattcaggcaataccattcaatctgttacaaaa
ccatcacatacaacaacttcaaagtcacgaggtatcgtacccagtactcgtacacttgtt
cgatcaagtacaattactccaacaacacctggggataatcagtcaaattctgattcatca
atcactcaagcatcaacaggaaatagcttaaatcagacaacccctgttgttattcaaaaa
ccgaaagaaactggcaaaatcacaggaattgttacaacagttctgattttaatattgatt
atattaattgtgattacttatgtctcatacaaagcctatcgtaagaagcgaacaaagcat
atgaactttgacaatcctgtctacagaaagacaactgaagaccgaattatgttggagaga
aacacatcaaatcaacttccagcgactctacagccgctgacagcttaa
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