Octopus bimaculoides (California two-spot octopus): 106877797
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Entry
106877797 CDS
T04127
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106877797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106877797
03041 Spliceosome [BR:
obi03041
]
106877797
03032 DNA replication proteins [BR:
obi03032
]
106877797
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
106877797
Spliceosome [BR:
obi03041
]
Complex A
U1 snRNP components
Sm proteins
106877797
U2 snRNP components
106877797
Complex B
U1 snRNP components
106877797
U4/U6.U5 tri-snRNP components
106877797
Complex C
U2 snRNP components
106877797
DNA replication proteins [BR:
obi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
106877797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
106877797
NCBI-ProteinID:
XP_014782298
UniProt:
A0A0L8GC50
LinkDB
All DBs
Position
21:1900154..1912721
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AA seq
92 aa
AA seq
DB search
MAYKGGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNLRIEGCIVGFDEYMNLCLDDA
EEVYMKTKTRKQLGRILLKGENITLLQQVDQK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcttataaaggaggtcagaaggtccagaaagttatggttcaaccaattaatttgatt
ttccgttacctacaaaataggtcgagaatccaagtatggttgtatgaacaagttaactta
cgaattgaaggatgtatagtgggttttgatgaatacatgaatctctgtttggacgacgct
gaagaggtttacatgaagacgaaaaccagaaaacagctgggtcgcatattgctgaaaggt
gaaaatattacattactacaacaggtggatcaaaagtaa
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