Octopus bimaculoides (California two-spot octopus): 106878849
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Entry
106878849 CDS
T04127
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit pan3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106878849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106878849
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106878849
mRNA degradation factors
3'-5' decay
Pan complex
106878849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
106878849
NCBI-ProteinID:
XP_052829530
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All DBs
Position
16:complement(21597350..21680466)
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AA seq
822 aa
AA seq
DB search
MADLEQCKGIGDPLGSVNPLNAINTATGPAQGPSVGASPCIFIVPNLSQVSRSRNNALNV
ENCGINNGACVNVGVNMLERAVMSPEEEHGEEVQSQEHQQQQERGFCDGPMSDADPGSNP
NVDIVEDSAIQGISDSMANNGDQYFNATFRSSCHMTEFSPMMMRQRARVRSNFSGQLPQT
VKTFLPGRVDENISENFAALNLSNSSPSHDTSGATIRDYVGKSPTALNHSSSSPSFTTYS
QMTTISAPSPHVTPALNSSVSIISATSPSQSPRISPSNSPMLIRRTESPVSSLRQNTVGL
KSASNTIQENVGGTTYFYSPEDFAPQFQSVQKEYIFHQQQQQPVVLPNYSFYPGMPSHIA
HMKVKANMPQFFLPDEIKMELLNRHACSLMQIDPAQHPDIPTEVDSYHQLYPLEAPPANP
LQKSSMFSYPSTCYKAVNTKDCLTYCLKRIHGFRLANTKCLATVDQWKKLYHPNVVQLKE
VFTTTAFGDNSLIFVYDFHPVAETLMIRHFSASSTVNGYTTDTTRTFTGSKTSGVSNGPR
QHAGLLPESLIWAYIVQLSSALRAIHTAGLACGVMDPTKILISSKSRLRINCIGIFDVLT
FDSNQGNYVSLVPHYQQEDLVALGKVVLALACNSIMAIQREQVSNSLELVARNYSTDLKN
LILYLMGSQRRQRSVNDIMPMIGARFYTQLDAAQLRSDVVENELAKEVENGRLFRLLCKL
VTILERPEFSIDASWSETGDRYMLKLFRDYIFHQVDEHGTPWVDMAHIVDSLNKLDAGVM
DKVTLMSRDEQTMLVVSYAELKQSFETAFTELLAATQHTNFA
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggccgacctagaacagtgtaaaggtattggggaccctttgggttcggttaatccctta
aatgcgattaatacagccactggaccggctcaggggccctctgtaggggccagcccttgt
attttcatcgtacctaatttgtcacaggtctcaaggagccgaaataatgcgttaaatgtg
gaaaactgcgggattaataatggcgcatgtgtaaacgtcggggttaatatgctagaaaga
gcagttatgagccccgaagaagaacacggtgaagaagtacagagccaagaacatcaacaa
cagcaagagagagggttttgcgacggccctatgagtgacgctgatcctggatcgaatcct
aatgttgatattgtggaagattcggccatacaaggaatcagtgatagtatggctaacaat
ggggatcagtatttcaatgccacgtttagatcaagttgtcacatgaccgaattttcaccc
atgatgatgagacaacgagctcgcgtacgcagtaacttttcaggacagctccctcagact
gtgaaaaccttcttaccaggtcgcgtcgacgaaaatatatcagaaaactttgctgcactc
aatctttctaactccagtccaagtcacgacacaagtggtgccacaattcgtgattatgtt
gggaagtctcccacagctcttaatcacagctcgagttcgccgtcattcactacatattca
caaatgaccactatatctgctccgtcgcctcatgtcacacctgccctcaacagctctgta
tccatcatcagtgccacaagcccttcacaaagtcccagaatctcacctagcaactccccg
atgttaatacgcaggacagagtctcccgtctcatctctcagacagaatactgtaggctta
aagtctgcgtcgaacacgattcaggaaaacgttggcggaacaacctatttttattctccc
gaagattttgctccgcaatttcagagtgttcaaaaagaatatatctttcatcaacaacaa
cagcagccagttgtactcccgaactattccttttacccaggaatgccgtcacatatcgca
cacatgaaagttaaagcgaatatgccgcagtttttcttaccagacgaaattaaaatggaa
ttgctgaatcggcatgcatgttcattaatgcaaatcgacccagctcaacatccagacatc
ccaacagaggtcgacagctatcaccaactctatcctcttgaggcaccacctgccaacccg
ctccagaagtcctcgatgttcagctatccgtcaacatgttacaaagctgtaaatacgaag
gattgtctcacgtactgccttaaacgaatacatggttttcgtctcgctaacacaaagtgt
ctggctacagtcgaccaatggaagaagctctatcatccaaacgtcgtacagctcaaggaa
gtgttcacaactacagcattcggtgacaattcattaatattcgtctatgattttcaccct
gttgcggaaactttgatgatcaggcatttctccgcatcttccacagtgaatggttatacg
acagacacaacgcgaacttttaccggtagtaaaacttctggtgtctctaatggtccacga
cagcatgctggtttactcccggaaagccttatatgggcttacattgtgcagttaagttct
gcgttgcgggcaatccatactgcaggtttggcttgtggtgtaatggatcccacaaaaatt
ttgatatcaagtaaatcaagattacgaatcaactgcatcggtatttttgatgtattaaca
ttcgacagtaaccaggggaattatgtcagtctcgtccctcattatcaacaagaagatctt
gttgccttgggtaaagttgtgcttgctttagcatgcaattccatcatggcaatacagcgt
gagcaggtttcgaactcgctggagcttgtggcacgcaattattcaacagatttgaagaat
ttaatcttatacctaatgggatcgcaacgacgacagcgcagtgttaacgatataatgcca
atgattggtgcaaggttttacacacagcttgatgctgcacaactacgcagtgatgttgtt
gagaatgagttggcaaaggaagttgaaaacggccgcctgtttcgactcctttgcaagtta
gttacgatattggaaagaccggaattctcaattgatgcttcctggtcagaaacaggagat
cgatacatgttaaaactcttccgtgactatatcttccaccaagttgacgaacatggcaca
ccatgggtagatatggcacatatcgtggactcattaaacaagctcgatgcaggtgtgatg
gacaaggtgaccttgatgtccagggacgaacagacgatgttggtggtatcttatgcagag
ctaaaacagagcttcgaaactgcattcacagagctgcttgctgctacacagcacacaaat
tttgcataa
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