Octopus bimaculoides (California two-spot octopus): 106879229
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Entry
106879229 CDS
T04127
Name
(RefSeq) valine--tRNA ligase isoform X2
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106879229
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
obi01007
]
106879229
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
obi03016
]
106879229
Enzymes [BR:
obi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
106879229
Amino acid related enzymes [BR:
obi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
106879229
Transfer RNA biogenesis [BR:
obi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
106879229
Prokaryotic type
106879229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1_2
tRNA-synt_1g
Val_tRNA-synt_C
Jag_N
tRNA-synt_1e
VPS51_Exo84_N
Motif
Other DBs
NCBI-GeneID:
106879229
NCBI-ProteinID:
XP_014784201
LinkDB
All DBs
Position
2:complement(129376554..129422321)
Genome browser
AA seq
1080 aa
AA seq
DB search
MQHRYLSLNLYYFHEQKLRELPSRNNTEIMADISVEAPPSSGDVMDGAPKPKTAAQLKKE
AQKQAKLEKFKAKQEKLQAKKDDNSEKKKEKKVKDRAIITYDVQTPKGEKKDTKCSMPDA
YSPQYVEAAWYDWWVKCGYFKPEYALSQNKGGSPPEKFIMVIPPPNVTGSLHLGHALTNA
VEDTITRWHRMNGKATLWNPGCDHAGIATQVVVEKKIFKEQGITRHELGRENFLKEVWKW
KNEKGDRIYHQLRMLGSSLDWDRTCFTMDPKLCRAVTEAFVRLHQRKLIYRSVRLVNWSC
TLNSAISDIEVDKKEISGRTFLAVPNYKDKVEFGVLVSFAYPVVDSDEKIIVATTRVETM
LGDTAVAVHPDDERYKHLHGKFVQHPFLERRLPIVCDDFVDQEFGTGAVKITPAHDHNDY
EVGKRHSLPFVTVIDEEGNITNDCGQFSGMKRFDARKAVTQALKDKGLYESSVDNPMVIP
TCSRSKDIIEPLLKPQWYVDLKDMAAQAVKDVKEGNLKIIPDMHKKTWYRWLEDSRDWCI
SRQLWWGHRIPAYFVTVNDPNVPEGLGTDDKYWVSGRTEEEAKQNAAERFNVSVEKISLK
QDEDVLDTWFSSGIFPFSIFGWPDETPDLQAYYPGTLLETGHDILFFWVARMVMMGNALL
GKLPFKEVYLHAMVRDAHGRKMSKSLGNVIDPLDVITGISLQGLHDRLKDSNLDEKEVSK
AKAGQKADYPQGIPECGTDALRFALVSYTSQGRDINLDVLRVQGYRFFCNKLWNVTKFAL
SALGESFVPSPVKENQGSIMDKWILSRLSEAVMLSTSGFENYDFPTVTTAIYNFWLYELC
DWYVESIKPILYGSDDEAKTITSNILFTCLDVGLRLLHPIMPYVTEELFQRLPGENKKDT
TSICVHPYPTTKECDYRYPDIEKNVEFMQSVVKSVRSMRADYNLTKTKADVYLKCSDEES
ANILKSFVDIIANLASSDHVNILINQEPPTGCAMITVSAKCETHLMLKGLIDINKEISKL
EGKKEKLNSQLNKLNESIQKPDYETKVPEEVRKQNTSKVSELSAEVEKLTKGISALMTMQ
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatagatacctttcactaaacctgtactacttccatgaacagaaacttcgtgaa
ctaccaagtcggaacaacactgaaataatggcagatatttctgtggaagctcctccgtcg
tctggcgatgtcatggacggagcaccgaaacctaaaacagctgcccagctgaaaaaggaa
gcccaaaagcaggctaaacttgaaaaattcaaagctaagcaagagaaattacaggccaag
aaagatgacaatagcgagaagaaaaaagaaaagaaggtaaaagaccgagccattataacc
tatgatgttcaaacgccaaagggtgagaaaaaagataccaaatgttctatgccagatgca
tacagcccacagtatgtggaagctgcttggtatgactggtgggttaaatgtggctatttc
aagccagaatatgctttatctcaaaacaaaggaggttcaccacctgaaaaattcattatg
gtcattcctccaccaaatgtaactggttcccttcatttaggccatgctttaactaatgct
gttgaagataccataacaagatggcatcgcatgaacggtaaagcaacgctgtggaatcct
ggttgtgaccatgcaggtattgctacacaagttgtggtggagaagaaaatttttaaagaa
cagggtatcactcgacatgaacttggtagagaaaactttctaaaagaagtatggaaatgg
aaaaatgagaaaggagacagaatttatcaccagctacggatgttgggtagctctctggat
tgggaccgcacttgttttactatggaccctaaattgtgccgtgctgtcactgaagctttt
gtccgtttgcatcaacggaaattgatttatcgcagtgtcagacttgtaaattggtcttgt
actttgaattctgctatttcagatattgaggtagataaaaaagaaataagtggacgtact
ttccttgctgtacctaactataaagacaaagttgaatttggagttcttgtctcatttgcc
tatcctgtagtagactcagatgaaaaaataattgttgctacaacacgtgttgaaacaatg
ctgggagacacagcagttgctgtccaccctgatgatgaacgttacaaacacctccatggg
aaatttgtccagcatccatttcttgaaagacgccttccaattgtatgtgatgactttgtt
gatcaagagttcggaacaggtgctgtaaaaatcacaccagcccatgatcacaatgattat
gaagttggtaaacgacacagtctcccatttgtgaccgttatagacgaagaaggaaacata
acaaatgattgtggacaattttcaggcatgaaacgattcgatgctagaaaagcagtgaca
caagctttgaaagataaaggcctctatgaaagttctgttgacaaccccatggttatacca
acatgcagtcgttcaaaagatattatagaacccctcctcaaaccacagtggtatgttgat
ctcaaagacatggctgcacaagctgttaaagatgtcaaagaaggcaatctgaagattata
cctgatatgcataaaaaaacttggtatcgttggttagaggattcaagggattggtgcata
tctcggcagttgtggtggggacatagaatcccagcttattttgtcacagttaatgatccc
aatgtaccagagggcttgggtactgatgataagtactgggtgagtggtcgcactgaagag
gaagctaagcagaatgctgcagaacgtttcaatgtatctgtggagaagatttctctgaaa
caagatgaagatgtacttgacacctggttttcatctggtattttcccattttctatattt
ggttggcctgatgagacacctgatctccaagcctattatcctggtactttgttggaaact
ggacatgatatcttgttcttctgggttgctcgtatggtgatgatgggtaatgcactcctt
ggaaaactaccattcaaagaggtataccttcatgctatggttcgtgatgctcatggacgt
aaaatgagcaaatctcttggcaatgttattgatcctttggatgttattactggaatcagt
cttcagggtctccatgatcgactgaaagacagtaatttggatgaaaaagaagtttcaaag
gccaaggctggtcagaaagctgattaccctcaaggtattcctgaatgtggtactgatgcg
ttgaggtttgctctcgtgtcatacacttctcaaggacgagacattaatttagatgttttg
agagttcaaggttatcgcttcttctgcaataaactttggaatgtaaccaaatttgcattg
tcagctcttggagaaagttttgtaccatcacctgtaaaagagaatcaaggaagcattatg
gacaaatggatattgagtcgtctttcagaagctgttatgttgtcaacatctggatttgag
aattatgacttcccaactgttactactgctatttacaatttctggttgtatgagctttgt
gattggtatgtggaaagcataaaaccaattttatatggatcagatgatgaagctaaaact
attacaagcaatattctttttacctgtcttgatgttggtttacgacttctccacccaatt
atgccatatgttactgaagaattatttcaaagattacctggagaaaacaagaaagatacg
acaagtatttgtgtacatccttatcctacaacaaaagaatgtgactaccggtatccagat
attgagaagaatgtagagtttatgcagtctgtggtaaagagtgtcagatcaatgagggct
gactataatttgacaaagacaaaagctgatgtttacttaaagtgttctgatgaagaaagt
gccaatattttgaaatcatttgttgacattattgccaacctggcctcaagtgatcatgta
aatatacttatcaaccaagaacctccaactggttgtgccatgattaccgtatcagccaaa
tgcgaaactcacttgatgctaaagggtcttattgatattaacaaagaaatctctaagctg
gaaggcaagaaagagaaacttaattctcaactaaacaaactaaatgaaagtattcagaaa
cctgattatgaaacaaaagttccagaagaagttaggaaacaaaacacttcaaaggtgtct
gaactctctgctgaagttgaaaaactaacaaaagggattagtgcactgatgacaatgcag
taa
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