Octopus bimaculoides (California two-spot octopus): 106879238
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Entry
106879238 CDS
T04127
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obi03009
]
106879238
Enzymes [BR:
obi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106879238
Ribosome biogenesis [BR:
obi03009
]
Eukaryotic type
Pre-60S particles
Helicases
106879238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
Motif
Other DBs
NCBI-GeneID:
106879238
NCBI-ProteinID:
XP_052832043
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All DBs
Position
23:complement(22211666..22266351)
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AA seq
837 aa
AA seq
DB search
MGRKLKKKHVKEEEKDSKPVIDVEDMYDGEELTMEEESSEARKLIQEQNRKKKKSGGFQS
MGLSQPVFKGILHKGYKIPTPIQRKTIPLLLAGKDIVAMARTGSGKTAAFLIPMFEKLKT
HSAKAGARALIMSPTRELAMQTLRFTKELGKHIGLSAAVILGGDRMEDQFSAMHSLPDII
IATPGRFLHVVMEMKLKLSSLQYVVFDEADRLFEMGFKEQLDEILRRLPESRQTLLFSAT
LPKQMVEFAKAGLNNPTLVRLDVDNKLSDQLKTAYFYCRSVEKPSLLLYLLKSVVKPFEQ
TVVFAATKHHVELLSMLLNSADIKNTFVYSSLDASARKINIAKFQHKRVNVLIVTDLAAR
GIDVPLLDNVINYNFPGKPKLFIHRVGRVARAGRSGTAYSLVCSEEIPYLIDLHIFLGRP
FQHVPAEGKKKAEETSDEDGLFGSVPSSLIDVWQDTLSRWHTENIDIQNMMQVCEKAYKQ
YVKTRPPPAGESVKRMKELDNGALNIGVHPIFCDHISKNDQKRADFMNALHKYKTNLTVF
EICANNKSTKQLEMMKEKRRHHDRTIKQTITKKEDKIAEQEMRKVDANPESSVTVADDAD
DQANIEDVFSSVVVSKPSKKAFVKKMKNAKSAKSVKDEENYVQYCPADYNSEKSLNIENN
FHNEATACGFEVTGDEVNQMQKMQYKMKWDRKKKKFLSKNAVLSKEPKKVRTESGALIPA
SYKSNFYEQWKKHNKIEEQEDDDDGGEIIPVKMETESAAAEEKHIRVFGLNKRRMGKPDE
DTPNALGNKKRRFKNKERKNAQQILKSRRVKAQKQSYQKYRQQENLKRKKKNKKNSK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggggcgaaaacttaaaaagaaacatgttaaagaagaagaaaaagattcgaaaccagta
attgatgttgaagacatgtatgatggtgaagaactcaccatggaggaggaaagttctgaa
gcacggaaattaattcaggaacaaaaccgcaaaaagaagaaatctggtggtttccaaagc
atgggtctgtcccagcctgtcttcaaagggatcttacacaaaggatacaaaatcccaaca
ccaatacagagaaaaaccattcctcttttgcttgctggtaaagacatagtagcaatggcc
cgtactggaagcggcaagacagcagcctttctgatacccatgtttgaaaagctgaagaca
cactcggccaaggctggtgcccgagcccttatcatgtcaccgaccagggaacttgctatg
cagactttgcgctttacaaaagagctgggcaaacacattggtttgagcgctgcagtcatt
cttggtggtgatcggatggaagatcagttctctgccatgcattcgttacctgacataatc
attgcaactcctggccgattcctccacgtagtcatggaaatgaagctgaagctgtcatcc
ctacaatatgttgtctttgacgaagccgacaggctgtttgaaatgggattcaaagaacag
ttagatgagattctccgacgtctcccagaatctagacaaaccctcttattctcagccaca
ctgccaaagcaaatggtcgaatttgctaaggccggtctaaataacccgactctagttcgg
ttagatgttgacaataaactgagtgaccagctgaagaccgcttacttctattgccgttct
gttgaaaaaccgtctctgctgttgtatcttttgaaatccgttgtgaaaccttttgaacaa
actgttgtgtttgctgccaccaaacaccatgtggaactactgtcaatgcttttgaactca
gccgacatcaagaatacattcgtctacagttctcttgatgcttctgctcgtaaaatcaac
attgccaaattccagcacaaacgagtcaacgtcctaatagttaccgatttggcagcaaga
ggtattgatgtccctctcttggacaacgtcattaattacaacttcccgggcaagccaaaa
cttttcatacacagagtgggtcgagttgcacgtgctggtagaagtggcactgcctattct
cttgtgtgttccgaagaaatcccttaccttatagatctccatatatttcttggtcgaccg
tttcagcatgttccagctgagggaaagaagaaagcagaggagacatcagatgaggatggt
ttatttggctcggtaccaagttccctgatcgatgtctggcaggacacgctatcacggtgg
cacacagaaaacattgatattcaaaatatgatgcaagtctgtgaaaaagcctacaagcag
tatgtcaagacacgaccaccaccggctggagagtctgtcaagagaatgaaagaacttgat
aatggagcactcaatattggggtccatcctattttctgtgaccacatatccaaaaatgac
cagaaacgtgcagattttatgaatgccttacataagtataaaaccaatttgacagtgttt
gaaatctgtgccaacaacaaaagtacaaaacagctggagatgatgaaagagaagagaagg
caccatgatcgtacaatcaagcagaccatcaccaagaaggaagacaagatcgccgaacaa
gagatgaggaaggtggatgctaatccagaaagttctgtaacagttgctgatgatgctgac
gatcaggctaacattgaggatgttttcagctctgtagttgtgtcaaaaccatcaaagaag
gcttttgtaaaaaagatgaagaatgcaaaatctgcaaaatcagtgaaagatgaagagaac
tatgtccaatattgtccagctgattataacagtgagaagtcccttaacattgaaaacaac
tttcataatgaggccacagcatgtgggtttgaggttacaggagacgaagtgaatcagatg
cagaagatgcagtacaaaatgaaatgggatcggaaaaagaagaagtttttatcaaagaat
gctgtcctgagcaaggaaccaaagaaagtaaggactgaaagtggagccttaattccagca
tcatacaaatccaacttttatgaacagtggaagaagcacaacaagatagaagaacaagaa
gatgatgatgatggtggtgaaatcattccagtcaaaatggaaacggaatctgccgctgct
gaagagaaacacataagggtgtttggtttaaacaaaagacgaatgggcaaacctgatgaa
gacactccaaatgctttaggcaataagaaacggagattcaaaaataaagagcggaagaat
gctcagcagattctgaagagtcgccgagtaaaggcacagaaacagtcataccagaagtac
cggcaacaagagaatttgaaacgcaagaagaaaaacaaaaaaaattcaaaatag
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