Octopus bimaculoides (California two-spot octopus): 106879309
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Entry
106879309 CDS
T04127
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obi03041
]
106879309
03036 Chromosome and associated proteins [BR:
obi03036
]
106879309
Spliceosome [BR:
obi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106879309
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
106879309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_occluded
HAT_Syf1_CNRKL1_C
RRM_7
RRM_Nup35
RRM_3
Nup35_RRM_2
GlcNAc-1_reg
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
106879309
NCBI-ProteinID:
XP_052828760
LinkDB
All DBs
Position
1:183183202..183223890
Genome browser
AA seq
810 aa
AA seq
DB search
MSDKGDVDEPAVSEMSPSEDDSLMLCQEDEEMEPEEGDDSSSELDSEDDDEAEKEKIRCL
EEQILSYPYTYAPHLDLIRALRQAGELERLRAARQYMSEIFPLTEELWLEWLKDEVSLAT
EDDRERIEKLFDKAVSDYLAVDVWLEYVQYAIGGMGSPNGISHVRAIFDRAVTEVGLHVV
KGANIWDAYREFENAILAGLEPEEADSGKPNPAYIEQRSRLVSLFKRQLSVPLLGIKETY
AEVKEWFPELASDKTFQQIYQQTLSKLEKLKPFEKELAATDEYYAKMEAYYKYIEYELSL
DDPARIQCIYERAITHGYLNAELWLQYTRYLDTKLPIKKVVLAAYERSVRNCPWKAELWG
RYILAMERHKEPDVKITVCPHLVFGDFRGDPSSLQQYWASIEVRHCKNIEKARELWNSIM
TQGHGAESHMWMEYFQMEKAYGNAKNCRKVLQRALNSVTDWPQGIVDAYLQFEREEGTLE
DYEISLNKCTAQLQRLQQRQALAKEKEQMMKDQKRLNDRNIKKVVRKPIGSHERPGDSST
TTKRKLHEQQQVNITDKDGFKIPVVPALVGEVTPRQPDPEGPTSAKKVKTEKPPPGFTPK
FESSKQDRTVFVSNISYDLDEDNLEEIFSKCGEIVQIRLVQNYKGKSKGYAYVEFKSTNS
LEKALKMDREMIEGRPIFVSKCEDRSVTKTHQFKFSTNLEKNKLFVKGLPFSCTKETLEK
IFKEHGTVKDVRLVTYRNGAPKGLAYVEYEDPSDTAKAILKTDGLTMDEHTISVSISNPP
SRKAPMNRRPSSSTSTFTPTLGGGKKESEV
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtcggataaaggtgatgttgacgaaccggcggtgagtgaaatgtcaccaagcgaggac
gacagtttgatgctgtgtcaagaagacgaagaaatggagcctgaggaaggagatgacagt
agttctgaactggattccgaagatgacgatgaagcagagaaagaaaaaatacgttgtcta
gaagagcaaattctcagttacccttatacatatgctccacatctggatttaatcagagca
ctgagacaagccggagaactagagaggttgagagcagcgagacaatacatgagtgaaata
tttcctttaactgaagaattatggctggaatggttgaaagatgaagtatctctagcaact
gaagacgatcgtgaaaggattgaaaagctttttgataaagctgtttctgattaccttgct
gttgatgtctggctagaatatgtccagtatgccattggaggaatgggatcaccaaatggt
atttctcatgtaagagctatttttgatcgagctgtcactgaagttggacttcatgttgtg
aaaggtgccaacatatgggatgcttacagagagtttgaaaatgctattttagctggtctt
gagccagaagaagcagactcaggcaagcctaatccagcatatattgaacagagatctcgg
ttggtttcactgtttaagcgccaactttcagtgccgctccttggaattaaagaaacatac
gctgaagtgaaggaatggttccctgaactggcatcggacaaaaccttccaacagatttac
cagcagacactcagtaaattggaaaaattaaaaccttttgaaaaagaactggctgcaaca
gatgagtattatgccaagatggaagcttattataaatacattgaatatgaacttagtctg
gacgaccctgcccgaatacagtgtatatatgaacgggcaatcacacatggatacctgaat
gcagaactttggctccagtatacacgctatttggacaccaagttgcccatcaaaaaggtt
gttctggcagcttacgaacgttctgtgagaaattgtccttggaaagcagaactgtggggt
cgttatatcttagcaatggaacgacacaaggaaccagatgtgaagataacagtatgcccg
catttagtttttggagacttcagaggtgacccgtctagtctacagcagtattgggcatca
attgaggttagacattgtaaaaatattgagaaagcacgagagttatggaacagcatcatg
actcagggtcacggagctgaaagccacatgtggatggagtatttccagatggagaaggca
tatggtaatgcaaagaattgccgcaaagtactacagagggcacttaactcagtcactgat
tggccacaagggattgttgatgcctacttacaatttgaacgagaagaaggtaccttagaa
gactatgaaatttccctcaacaaatgtactgcccaactacaacggttacaacaaagacaa
gctctggctaaagagaaagaacagatgatgaaagaccagaaacggttgaatgaccgcaac
attaagaaggttgtgcgtaaaccaattggttcccatgagaggccgggggacagtagtacg
acaacgaaacgaaagcttcatgaacaacaacaagtaaacattacagataaagatggtttt
aagataccagtggttcctgctcttgttggagaggtgacaccaaggcaacctgaccctgaa
ggccctacatctgccaaaaaagttaaaactgagaaacctccacctggatttacccctaag
tttgaatctagcaaacaagatcgcacagtctttgtgagtaacatcagctatgatttggat
gaagataatctggaagaaatattttcaaagtgtggagaaattgtccaaatccgacttgtc
caaaattacaaaggcaaatctaaaggttatgcttatgttgagtttaaatcaacgaattct
ttggagaaagctcttaaaatggatcgagaaatgattgaaggtcgacctatatttgtgtct
aaatgtgaagacaggagtgtgacaaaaacgcatcagtttaagttttccaccaatttggag
aagaacaagctatttgtcaaaggtttaccattcagttgtacaaaagagactttggagaaa
atctttaaggagcatggaactgtgaaagacgtccggcttgttacatatagaaatggtgcc
cctaagggcttggcctatgtggaatatgaagatccttctgatactgctaaagcaattctt
aaaactgatggcttaacaatggatgagcacactatatctgtatcaatcagtaacccaccc
agtcggaaagctccaatgaaccggagaccttcatcatctacatccacgttcactcctact
ttaggaggaggaaagaaagaaagtgaagtgtaa
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