Octopus bimaculoides (California two-spot octopus): 106879323
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Entry
106879323 CDS
T04127
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106879323
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
obi01007
]
106879323
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
obi03016
]
106879323
Enzymes [BR:
obi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
106879323
Amino acid related enzymes [BR:
obi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
106879323
Transfer RNA biogenesis [BR:
obi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
106879323
Prokaryotic type
106879323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1d
Jag_N
BrnA_antitoxin
DUF7436
Motif
Other DBs
NCBI-GeneID:
106879323
NCBI-ProteinID:
XP_014784317
LinkDB
All DBs
Position
1:complement(184191064..184224599)
Genome browser
AA seq
1068 aa
AA seq
DB search
MLESSFDQTVMAASIQHAMLLSHSHLTLNTCRRTFNKFTNNPYHSYSRAIRNCRKLIQNR
VTRPSQAKISNALNLRSFSQATDDSDSNNCPRGLVPWQKKEFTNILPPAYNPEYVEAIWY
KWWEQKGFHQPQPIQDAVKKRRFVICLPPPNVTGSLHLGHALTCSIQDAIVRWYRMQGHQ
VLWVPGLDHAGIATQVIIEKWLWKKKGCTKHDIGREKFLEEVWKWKIEKENTIYEQMKRL
GASLDWTRHFFTMDQNLSKAINEAFIRLHDEGLIYRKKCLVNWSCVLKSAISDVEIEMLQ
LKGKTKLEIPGYAKKVQFGTLTSFAYPVVGTDEKIIVATTRPETIFGDVAVAVHPEDSRY
QHLHGALLQHPFSDRKIPVIADEFVDKEFGEGAVKLTPCHDQTDYEVCERHGLPISFSII
DDSGLMCNVGAPFEGMKRFDARKAVVKSLKQKDLYHGTINHSMMLPVCSRSKDVIEPLLM
DQWFLNCKTMATKATQAVTNNLLCFIPDYYDSIWFHWLQNIRDWCISRQLWWGHQIPAYF
ATTTPSPQLSTSSSTGIWVSARNQEEALAKASEKLSVPKEQITLKQDEDVLDTWFSSALL
PFSVFGWPEKTIDYESFYPTDLLETGSDILFFWVARMVMLGQKLTGQLPFDKILLHGIIR
DSEGRKMSKSQGNVIDPLNVIYGASLKDLQNQLDSSVLDQKEIEHCKKEQHKNFPHGIPQ
CGADALRFTLCSYNFKLQTINIQMDHIKSSKFFCNKIWQASRFIHLNQEDSFTPKRPFAL
SGHESAIDKWILSVLTETTHYCDPKFRNYDLQLVTNSLRKFWIQNFCDIYLESVKPILKN
GSEEEKETVNQVLHFCLETYLKAISPFMPYLSEELYQQLMQRSGHFDVSVCSAAYPNPKD
FTWRNPFIEEDMNIVQDLCSQALFLRKEFSLTKAKGNVFISSSNEILLDRLSQNYSVPIS
TLSRSASVNFIYGILNIPHGCVSSKTVADTCQVHLSLQGLVDPVIELNKLTKKVEKVLKE
LEKIAASMNRDLRNNELVDEKKIKAVENLNSELDRLQNYVSVLEKLEP
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaagtagtttcgatcaaactgtgatggctgcctccatccaacatgccatgctg
ttgtcccattctcacctaacactcaacacttgtagacggacatttaataagtttacaaat
aatccctatcatagttattctcgagctatcaggaattgccgaaaactcatacaaaaccga
gtgactcgaccaagtcaagctaaaatttcgaatgctttgaatttaaggtctttctcacag
gccactgatgactcagattcaaataactgtccaagaggcttagttccatggcaaaaaaaa
gaatttactaatatccttcctccagcctacaacccagaatacgttgaagccatatggtac
aaatggtgggaacagaaaggttttcaccaaccacagccaattcaggatgctgtaaagaag
agaaggtttgtcatctgtttgcctccccctaatgtgactggttcactccatcttggtcat
gctttgacatgctccattcaagatgctattgtccgttggtaccgaatgcaaggacaccag
gtactctgggtcccaggactggaccatgctggcattgcaactcaagtgatcattgagaaa
tggttatggaagaagaagggctgcacaaaacatgatattggcagagaaaaatttctagaa
gaagtatggaaatggaaaatagaaaaagaaaacacgatttatgaacaaatgaaacgacta
ggagcctcacttgactggacgcgacatttttttacaatggatcagaatctctccaaagct
attaacgaagcttttattcgactccatgacgagggcttaatataccgtaaaaaatgttta
gtcaactggtcttgtgttctcaagtcagccatttctgatgttgagatagaaatgttgcag
ttgaaagggaagaccaaactcgaaattcctggttatgctaagaaagtacagtttggaact
ttaacctcatttgcatatcctgttgtaggaactgatgaaaagatcattgtggccaccact
cgtccagagacaatatttggggatgtggctgtggctgtacaccctgaagattctcgttac
caacatcttcatggagccttacttcagcatccattttcagatcgaaagattccagtcatt
gctgatgagtttgtcgacaaagagtttggagaaggtgctgtcaaactgaccccttgtcat
gatcaaacggactatgaagtttgtgagcggcatggtttaccaatttccttctctatcatt
gatgactctggtcttatgtgcaatgttggtgctccttttgagggaatgaagaggtttgat
gcaagaaaagctgttgtaaaatccttaaaacagaaagacttataccatggaacgatcaac
cattccatgatgcttcctgtctgcagtcgttccaaagatgttattgaacctcttctgatg
gaccagtggttcctcaattgtaaaacaatggcaaccaaagcaactcaggctgtcaccaac
aacctcctctgcttcatccctgattactatgacagtatctggttccactggctgcagaat
atcagggactggtgtatttccagacaattgtggtggggacaccaaatacctgcttatttc
gctaccactacgccgtcaccgcagctatcaacctcgagttccactggaatatgggttagt
gccagaaaccaagaggaagctctagctaaagccagtgagaaattatctgttcccaaagaa
cagataactcttaaacaagatgaagatgtcttggatacttggttttcatcagcattgctt
ccattttcagtatttggatggccagaaaaaacaattgactatgaatctttctacccaacc
gaccttcttgagactggcagtgatatcttgttcttctgggtggccagaatggttatgctg
ggacagaagttaacaggacagttacctttcgataagattttattgcatggaattatccga
gactccgaaggtagaaagatgagtaaatctcaaggaaatgtgatcgatccattgaatgtc
atttatggtgcatccttaaaggaccttcagaaccaactggacagtagtgttcttgaccaa
aaggaaattgaacattgtaaaaaagagcaacacaaaaacttcccacatggtattccacag
tgtggcgctgatgctcttagattcacgctttgttcttataatttcaaattgcaaaccatc
aacattcaaatggaccatatcaaaagttcaaaattcttttgtaataaaatatggcaagct
tcaagattcattcacctcaaccaagaagattctttcactcccaagcgaccgttcgcactg
tctggtcatgaatctgctattgataaatggatcctcagtgttctcactgaaacaacacac
tactgtgacccaaaattccgcaattatgatctacagttagttaccaattccttacgcaag
ttctggattcagaatttctgtgatatttatttggaatctgtgaaaccaattttaaagaat
ggttcagaagaagaaaaagaaaccgtgaatcaagtgttacatttctgcctggaaacttac
ctcaaagccatcagtcctttcatgccttacctcagtgaggaactctaccaacaacttatg
caaagaagcggccattttgatgtcagtgtttgcagcgctgcttaccctaaccccaaggat
tttacctggcgaaatccattcattgaagaagacatgaatattgtacaagatctctgcagt
caggcattgtttttgaggaaagaatttagcttgaccaaagctaaaggaaacgttttcatc
agttcttccaatgaaatcctgctggatcgcctctctcagaattactctgtaccaatatcc
acactctcaagatcggcttcagtaaacttcatctatggaatcttaaatattcctcacggc
tgtgtatcatcaaaaacagtagctgacacttgccaagtgcatttaagtcttcagggttta
gtggatcctgtcattgagttgaacaaactcactaaaaaggtggagaaagtgttgaaagaa
ctggagaaaattgcagcttcaatgaacagagatctgagaaataacgaacttgttgatgaa
aagaagataaaagctgttgaaaacctcaactctgaacttgaccggcttcagaactatgtg
tccgtcttagaaaaactggaaccctaa
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