Octopus bimaculoides (California two-spot octopus): 106879427
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Entry
106879427 CDS
T04127
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106879427
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106879427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Baculo_LEF-3
DUF5662
Motif
Other DBs
NCBI-GeneID:
106879427
NCBI-ProteinID:
XP_052823618
LinkDB
All DBs
Position
4:complement(106021622..106282528)
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AA seq
1754 aa
AA seq
DB search
MVEILIGLYESQLLDIKSTSIPELQQLWTACCDDSPYNCHTSCQVLLTLVYSKDADYSYV
LNGLLNLMPSAKNLTPLISAIGDLLILQCHAQSKCSTKSYISPYSMRTPPHPFITVCTNR
PESWPLLQQQIYQICVHQKEIISSNAVAILKPFLLYIILDPVRQDSTMPLRLAIQQILFQ
QAYLATSVDDDQYVGFLCSMVPYIQLDSSQSIGEGVQFVSQLLFIMLQQSTCPSLLRPLV
QNAMALCYLCLQRDLSVMMLTHKILQIAHKWPEVLSTGQNIILLSQMLFEINADNTVVLD
IALIILNTNNTAVHPVVHGCLILPLLYLMLSPQADPFTLHTIQTASTSIIEAMEKIQLDY
KVSASSETDSTAGMLPISWSEEPCMTEGAYKSRQYLKLCSDIVNESEINCLLLMNNIQES
LTGINEIPVILTNFLASLFVTPQCTNFSANAMNSLLVVAEKDDRQASFLLPLFLYQIGRE
PDPNRKLNILKAIPKLAQHKVVVGPILKSIQELGSYKGLKAIFITLLTELWKIQDRCFPQ
LQKALTEEPITPGTIAAISNEVVFAKAHSITSICELRPVQHGPDMLSLLSDILNSCLLKS
TTPAAIMSLKGLTHLCEAEVINIQSLWKLLSTKLANDSRPGITIEICKLFALVPQLAVEN
EEFEKFQEAVVSMLWLISQKFGDSSSKQSNPEVSAAAFRTLAAFKVDNFTISHFPQQVTD
DFRMQAEAVIKLEIEKNPDMTIENVFPVVPGVCYIRIIPTLKTQAQLDAYEEFLNSMVQN
EVTNLPRGIYSSLNRKYGTGNQEKALNEIPTLLQHLYEQTKQPGLRPGLAAGLLFAYNLP
AEQNKAPKPHKILSQSKNFQQIFSTLLHEVPVQPSEWHRCLLMPHTWVSFIDRLFIAMIE
GRHAEIDLQLQHNQIQEDEVSAKKNSAWLWVRDTLTGVIKVTSRGNPTMQANCVMALSGV
VCAVNKFRSGQDSSSLGEEESGSAHMKHKQWLMLITDTVLSLWNVKYKTSGNNLLGLCQQ
RSQTDRAPASILCQASACLALPRLVSSQLSPETCGRLFEVLSMMTLSLPGKSNQPESPVL
IFHNGLALGILISRLFEEHFVEVCGPKNMEEVWKSLDALEECALNDSFPNRSGCILGLTL
ALTSLCEDGKPESRQHLAEILDKLFSLLKNTDSSSDIFQVLCFAVATCSGSVFSANIINA
DTINSIFDYLKNLSEAHPQMCGVSLAVGSLCYSLNMLGHSSINKTTQTLCDSWTDCYLNE
DTPTLERVSALGALMALIGSERSLINVQTIPSLCSNVVNPATIIQLVKTVLKSQEEVGIQ
CCSAWMLGHAYLANSTVSEVKSSVPTNYHYLDNKYIIRALVDFLLDQGKRGVEVKCLSLQ
IAISQSTTSSSASVFLATWLGSALFNSLPVEAQNIFYQNLDVLIKCIPLKTLKEFLEHEC
INPFLFDQRQSQSSVTLNGLQKALMVNDPPESVTELLYTTVERIYKALPPHFQPNLYNMM
CKCLANLPEDRFDQLTDCDFLDPQLYIKGTYVRCFLVANGKQPLALLNSCIDALINNGQN
IPELYSLCLLFLSQCFYICSLNKTLTKDRLGWFLELIGHVRNLATGGLQLLNATMKSNIA
LDLAIQIVSAAICCWTSSVASTISGQHPAFMVDLVEKRQDGIKMQEISLSLKHHPNYWLQ
LLPTCVTCLTQEPWKAVLNMFIDWLLIMYELPDDKITPQTKRILNNCLCNLRNTKEFKRA
SVWNKVFKIYLNQL
NT seq
5265 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaattcttataggcttgtatgaaagtcagctgctagacattaaaagcactagt
attcctgaacttcaacagctgtggacagcttgctgtgacgacagcccttataactgtcac
accagctgtcaggttctattaactctcgtctattctaaagatgcagattattcttatgta
ctcaatggcttactcaatctaatgccctcagcaaagaatttaacacctttaatttctgct
attggggatcttcttatacttcaatgtcatgcacagagcaaatgttccaccaaatcatat
attagcccttactctatgagaaccccacctcatccattcattactgtgtgtacaaatcgt
ccagagagttggcctcttctacagcagcaaatataccaaatatgtgtccatcagaaagag
ataatatcttcaaatgctgttgcaatcctgaaaccatttctgctctatataattttggac
cctgtccgtcaggattccacgatgcctcttcgccttgccatacagcagattctatttcag
caagcctacttagctacgtctgtcgatgatgatcaatacgtaggcttcctgtgctccatg
gtaccgtatatccagttagactcttcacagtccattggtgaaggtgtccagtttgtgagc
cagctgcttttcataatgttacaacagtcaacatgtccctcactgttaagacctctagta
caaaatgctatggcattgtgctatctatgtctacagagagatctctctgtgatgatgctt
actcacaagattcttcaaattgctcataaatggcctgaggttttatcaaccggacagaac
atcattttactgagccagatgctttttgaaattaatgctgacaacacagtggtgctagac
attgcattaataatactgaataccaataacactgctgttcatcctgtagtccatggatgc
ttaatattacccttgctatatctcatgttgtcaccccaagcagacccatttactctacac
accatacaaacagcgtctacttccattatagaagctatggaaaaaattcagctagattac
aaggtctcagcttcttcagagactgattcaaccgcagggatgttgccaatttcctggtct
gaagaaccgtgtatgacagaaggagcatataaaagcagacagtatttgaaattgtgttct
gatatagtaaatgaatcagaaataaattgcctcctcttaatgaacaacattcaagaatca
ctaactggcatcaatgaaattcctgtgatattgaccaattttttagcgtcattatttgtc
acaccacagtgtacaaatttctctgcaaatgctatgaatagtttgcttgtagttgctgaa
aaggatgacaggcaggcttcatttttgcttcccttgtttctctatcaaattggacgtgaa
ccagatcccaatcgcaaactgaacatcctcaaagctattcctaaacttgctcaacataag
gttgtagttggtccaattttgaaatctatccaagaattaggctcttacaaggggctgaaa
gccattttcattacactactgacagaattatggaaaatacaggaccgctgctttccccag
ttgcagaaagcacttacagaagagcccatcactccaggtaccatagcagcaatatcaaat
gaagtggtttttgctaaagcacactcaatcacaagtatctgcgaattaaggcctgtgcag
catggaccagatatgttaagtcttttatctgatattctcaatagttgcttattaaaatca
accactccagctgcaataatgtcattgaaaggtttaacgcacctttgtgaagcagaagtg
atcaatattcaaagtctgtggaaattactgtcaaccaaacttgccaatgattctagacct
ggcattaccatagaaatttgcaagttatttgctctagtaccacaactagctgttgaaaat
gaagaatttgagaaattccaagaagctgttgtcagtatgctatggctaatttctcaaaag
tttggtgattccagttccaaacagagcaatcctgaagtcagtgctgctgctttccggacc
ttagcagccttcaaagttgacaattttaccataagtcattttccacaacaagtgacagat
gatttccgcatgcaagctgaagctgttatcaagttggaaatagaaaagaaccctgatatg
accattgaaaatgttttccctgtagttcctggagtatgttacatacgcattattccaaca
ctaaaaacgcaggcacaacttgatgcttatgaagaattcttgaatagtatggtgcaaaat
gaagtaacaaatctgccacgaggaatttacagttcattaaacagaaagtatggcacagga
aaccaagagaaagctttaaatgaaataccaaccctccttcagcatctctatgagcaaacc
aaacaaccaggcctgagaccaggattagctgctggcctgctctttgcttataacctaccg
gctgaacaaaacaaagcaccaaagccacataagatactgagccaaagcaaaaatttccag
cagatattcagtactttacttcatgaggtcccagttcaaccttcagaatggcaccgctgt
ctgctaatgcctcatacatgggtttcatttatagaccgtctttttattgcaatgattgaa
gggcgccatgcagaaattgaccttcaactacaacataaccagattcaagaggatgaagtt
tctgccaaaaaaaatagtgcatggttatgggtgcgagatacactgactggtgtaataaaa
gttacatcaagaggcaatcctaccatgcaagcaaattgtgtgatggcactctctggtgtg
gtttgtgcagtaaacaagttcagatctgggcaagattcatcatcacttggtgaagaggag
tcaggttctgctcatatgaaacacaagcaatggttaatgctaatcactgacaccgtactc
tctttatggaatgtcaaatataaaaccagtggaaataatctactaggactttgccagcag
cgcagtcaaacagatcgtgctccggcaagtatactgtgccaggcttctgcctgtctggca
cttccaagattagtgagcagccaactctctccagagacatgtggcagattgtttgaagtc
ctgtctatgatgacgttatcactacctggaaaaagcaaccaaccagaatctccagtcctt
atattccacaatggtttagctcttggcattttgatatctaggctttttgaagagcatttc
gttgaagtctgtggacccaaaaatatggaagaagtatggaaatctcttgatgctcttgaa
gaatgtgccttgaatgatagctttccaaaccggtctggttgcattcttgggttaactctg
gcactcacttctttgtgtgaagatggaaaaccggaatctcgccaacatcttgctgaaata
ctcgataaattattttctcttttgaaaaatacagattcttcttcagatatattccaggtc
ctttgctttgctgttgccacttgcagtggttctgtgttttcagccaatattatcaacgct
gatacaatcaacagtatttttgattatctgaaaaaccttagtgaagcacacccacaaatg
tgtggcgtcagcctggctgttggtagtttgtgttacagccttaatatgcttggtcactct
agcatcaacaaaaccacacaaacgctttgtgacagctggactgattgttatttgaatgag
gacacacctacactggagcgagtatcagcacttggagctttaatggcactaattggctct
gaaagaagcctgatcaatgtacaaaccattccttcattgtgtagcaatgttgttaatcca
gcaaccataattcaattggtgaaaactgttttgaaaagtcaggaagaagttggaatacaa
tgttgttctgcttggatgttaggtcatgcctatttggcaaattctacggtatcagaagta
aaatcaagtgttcctaccaattatcattatttggataacaaatacataattcgtgcatta
gtagattttctacttgatcaaggcaaacgaggtgttgaagtaaaatgtctcagccttcaa
atagcaatatctcagtcaacgacatcttcatctgcttccgtgttccttgcaacatggctt
ggttcagctttatttaattctttacctgtggaagctcagaatatattttatcaaaacttg
gatgtcctcatcaaatgcatccctttgaaaacactcaaggaatttctggaacatgaatgc
attaacccgtttctctttgaccaaagacaatctcagtcttctgtcactttgaatggtcta
cagaaagcattaatggtgaatgaccctccagagtctgttactgagctcttgtacaccacc
gtggaacgtatatacaaagcactaccaccacattttcagcctaacctctacaacatgatg
tgtaaatgtctagcaaaccttccagaagacagatttgaccaacttactgattgtgatttc
cttgatccacaattatatattaaaggaacatatgtccggtgcttccttgtggccaacgga
aagcagcctttagctttgttaaatagctgcattgatgctctcatcaataacggtcaaaat
atcccagagctttacagcttgtgcctcctgtttctatcgcagtgcttctatatctgttct
ctgaataaaactctcaccaaagatcgtctgggatggtttttagaactaattggccatgtt
cgcaacctagctactggtggacttcaattgttaaatgctaccatgaaatcaaatatagct
ctagatctagcaattcagatagtttcagcagccatttgttgttggacatcatctgtagcc
agcacaatatctggtcaacatccagcattcatggtggatttggtcgaaaaacgtcaagat
ggtataaaaatgcaggaaatctctctctctttaaagcatcatcctaattattggctccag
ttgttgccaacttgtgtcacttgcttaactcaagaaccttggaaagcagtacttaacatg
tttattgactggttgttaattatgtatgaactaccagacgacaagatcacacctcagact
aaaagaattctaaataattgtttgtgcaacttgcggaataccaaagaattcaaaagggca
tcagtctggaacaaagtttttaagatttacttgaaccaactgtaa
DBGET
integrated database retrieval system
