Octopus bimaculoides (California two-spot octopus): 106879513
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Entry
106879513 CDS
T04127
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03082
ATP-dependent chromatin remodeling
obi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106879513
03083 Polycomb repressive complex
106879513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obi03036
]
106879513
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
106879513
Histone modification proteins
HAT complexes
HATB complex
106879513
HDAC complexes
Sin3A-HDAC complex
106879513
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106879513
PRC2.2
106879513
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
106879513
Heterochromatin formation proteins
Other heterochromatin formation proteins
106879513
Chromatin remodeling factors
NuRD complex
106879513
NuRF complex
106879513
NuRF complex (fruit fly)
106879513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
106879513
NCBI-ProteinID:
XP_014784607
LinkDB
All DBs
Position
2:68551855..68579816
Genome browser
AA seq
448 aa
AA seq
DB search
MTDKDGGFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSLHRLILGTHTSSSPDSNNSRICSRWHSDNLDRSDEQNHLLIASVQLPNDNAQFDASHY
DSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHP
SKPDPSGECNPELRLKGHQKEGYGLSWNPNLNGHLLSASDDHTICLWDINTPPKEGRVID
AHTVFTGHTSVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHTVDAHTAEVNC
LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT
DRRLHIWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI
MQVWQMAENIYNDEEPETPAGELETARS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacggataaagacggaggttttgatgatgcagtggaggagcgggttatcaatgaagag
tacaaaatttggaagaagaacacaccatttctttatgatttggtcatgactcatgccctt
gaatggcctagtctaactgctcagtggttaccagatgtcactcgacctgaaggaaaggac
tattcgttgcatcggctgattctgggaacacatacctcatcatctcccgattcgaacaac
tctcggatctgctctaggtggcattctgacaatctggacagatctgatgaacaaaatcac
ctacttattgctagtgtgcagctgcctaatgacaatgcacagtttgatgcttctcattat
gacagtgaaaaaggagaatttggtggatttggttcagtgagtggcaaaatagaaatagaa
atcaagataaatcatgagggtgaagtgaacagggctcgctacatgccccaaaacccttgt
atcattgccactaaaacaccatccagtgatgttttagtttttgattatacaaaacatcca
tcgaagcctgatcctagtggtgagtgtaatcctgaacttagacttaaaggacaccaaaag
gaaggctatggactttcctggaatcctaacttgaatggccatctgttgagtgcatctgat
gatcacaccatatgcttatgggatatcaacactccccccaaagaaggccgtgttatcgat
gctcatacagtatttacaggccatacttcagttgttgaggatgttgcttggcatcttctt
catgaaagtttatttgggtctgttgctgatgaccaaaaattaatgatttgggacacgaga
tctaacaatacaagtaaacccagtcatacggtggatgctcacactgccgaagtgaactgc
ttatcattcaatccgtacagtgagtttattcttgccactggttcagctgataagacagtt
gcattgtgggatctgcgtaatctcaaattaaaattacattcatttgaatcacacaaagat
gaaattttccaggttcaatggtctcctcacaacgaaactatcctggcatctagcggtact
gatagacgattgcatatttgggatctaagtaaaattggtgaggagcaatctgctgaagat
gcagaagatggtccccctgagttgctgtttattcatggtggtcacactgccaaaatctca
gacttttcatggaaccctaatgaaccttgggtcatctgctcagtttctgaagataatatt
atgcaagtctggcaaatggctgaaaatatctataatgatgaagaacctgaaacaccagct
ggagaactagaaacagctagatcttaa
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