Octopus bimaculoides (California two-spot octopus): 106879532
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Entry
106879532 CDS
T04127
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
106879532
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
obi01009
]
106879532
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
obi04515
]
106879532
Protein phosphatases and associated proteins [BR:
obi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106879532
Cell adhesion molecules [BR:
obi04515
]
Cadherins
Protocadherins
106879532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
106879532
NCBI-ProteinID:
XP_014784647
UniProt:
A0A0L8G342
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Position
20:37553394..37581797
Genome browser
AA seq
1119 aa
AA seq
DB search
MLNWWSLVFMVLLAVSNCQDLTYTVMEGEKPGTYLGNIAFDTSLMKNVQTEEMNLRFILL
KPAHSTEHQQLFKVNEKTGKFYTAQVIDAEAVCTQGSECFQMVDVIVQDGEALLKILKIK
IIIEDINDNKPIFPRRNINLYFSEGGSGMRKSIPNAVDQDISEKNSKISYHLQSKNNETF
SLIVTERIDGTSKLSINVNKKLDREVRSSYVLEIIAQDGGQPPLQTQLNVNISVTDVNDN
APVFMQDVYNVTIKNELNEQAPIITVSATDADKDENGKVSYRFSSRTSEITLSHFQLNET
TGEIFFRRIFSSSEKYMHLFIEAYDGANPPLSVIGMVQVNIQYTTNNPPEIRINFVSSVT
PNTAIVSEAISEGSFIAYVQVFDHDVGNNGQVSCNLRHDHFQLQSLGKTGYKVIVKKKID
REKKDNFNVTVTCQDKGTPALFTDYSFLIEVSDINDNAPLFEKSSYAASFFENNVIGLSI
VKVSAYDKDKRENAQITYFLQSDLPFSIGKLSGIIRAKTSFDREVSSFLTFPVFAKDQGN
PSLTGSTTLTVSILDVNDMSPKFTQPTFEFSTYENQQPNFPVGLINATDADQGLNSQLTY
SLIRNKGSFIPFQISNDGFLSVVQVLDRELQPEYRFKVLVNDKGSPSLNNSVNVRVKVID
ENDNSPEFVFPSGNNFSMTVYYQRYTNKEISIVQAHDNDVGKNAVLRYNIIGGNEKKLFD
IDKIKGSIYFARAATVQDSGLYKLQLVVFDSGEPMNSAESNLSLSIIVNNDTASINKGFE
HHTGIMLQHNLLIVIVLTVITVSVAVIVITTICVIRRNDIRNATTNTQVSNNSDHSQTLS
KQFTFNSDPSLRVPKGNGRRNRCGYNYSTVPEDLGLGCNTSAISENSNHSTGVNKAQVTF
QNVVAATNRSVHDCMSDISTGSSNNDSGRGWSDADAGTVQELQSMAENVTPSSQCAIPLL
NCRQKSNTVPVSFTSRENGFKPNQRSSFKPNSSSQNSPMNNLRSNHHSLSMYPKIQQQES
TYQKSPYSTSQQVQPPHTPYSLVAIPIRTIPNKLHYSLVQPQLMPKQQVVSCGANLSQAE
TSFCENQSSSSTDSCHLLDDIKKHSYSDRSNFILKDVIV
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgttaaattggtggtcgttggtgtttatggtgttattagctgtatcgaactgtcaagat
ctcacgtatacagtaatggaaggtgaaaaaccaggaacttaccttggaaatatagctttt
gatacgagtctcatgaaaaatgttcagacagaggaaatgaatctgagatttattctacta
aaaccagcacattccactgaacatcaacaattgtttaaggttaatgaaaagactggtaaa
ttctacacagcacaagtgattgatgcggaagcagtttgtacacaagggtcagaatgtttc
caaatggttgatgtcattgttcaggatggggaagctctcttgaaaatattgaaaattaaa
attatcatcgaagatatcaacgataacaaaccgatatttcctcgtagaaatataaattta
tatttttctgagggtgggagcggaatgagaaaatcaattccaaatgctgtcgaccaagat
attagtgaaaaaaattcaaagataagttatcatcttcaatcaaagaataatgaaacattt
tcattgattgtcacagagcgaattgatggaacatcaaaattaagcatcaacgtcaacaaa
aaacttgaccgtgaagtacgaagtagttacgttttagaaatcattgcacaagatggcggc
caaccgcctttacagacacaattgaatgtcaatatttcagtgacagatgtaaatgataat
gcacctgtattcatgcaagatgtctataatgtgacaatcaaaaatgagttaaatgaacag
gcacccataatcacggtgtctgcaactgatgcagataaagacgaaaatggcaaagtgtct
tatcgatttagttcaagaacatcagaaataacgctttctcattttcaattgaatgaaact
actggagaaatatttttccgtcggatattttcttcaagtgaaaaatatatgcatttgttt
atcgaagcttatgatggggccaacccgcctttaagtgttataggaatggtacaagttaat
atacaatacacaacgaacaatccaccagaaataaggattaattttgtatcttctgtaaca
ccaaacactgcaatagtcagcgaggctataagtgaaggcagttttattgcttacgttcaa
gtttttgaccatgatgtgggaaataacggacaagtcagttgtaatttaagacacgatcat
ttccaacttcagagcctcgggaaaacaggatataaagttatcgtaaagaaaaaaattgat
agggaaaaaaaagataactttaacgtcactgtcacatgtcaagataaaggaaccccagcc
ttgttcacggattattccttcttaattgaagtatcagatatcaacgataatgcaccatta
tttgaaaagtcctcatacgccgcttctttctttgaaaataacgttataggtttatcaatt
gtgaaggtgtcggcatatgataaggacaaaagggaaaatgctcaaattacttacttcctt
caatctgatttaccatttagcattggtaaactgtcgggtattataagagcaaaaacttct
ttcgatcgagaagtgagctcttttctaactttccctgtatttgctaaagatcagggaaat
ccatcattaactggcagcactacacttacggtatctatccttgatgttaatgatatgtcg
cctaaattcacacagccaacattcgaattttcaacttacgaaaaccaacaaccaaatttt
cctgttgggcttataaatgctaccgatgccgatcaaggtttaaatagtcagcttacttat
tcattgatcaggaacaaaggcagctttattccttttcaaatttctaacgatggatttctg
tcagttgttcaagttctagatcgcgaactccagccagaatatcgcttcaaagttttagtc
aacgacaaaggttcaccaagtttaaacaatagcgttaatgtccgcgtaaaagtcattgac
gaaaacgataactcaccggagttcgtattcccgagtggaaataattttagcatgactgtc
tattatcaacgttataccaataaagaaatcagcattgtgcaggcgcatgacaatgatgtt
ggcaaaaatgccgttcttcgatacaacatcattggaggaaatgagaaaaagttatttgac
attgataaaatcaaaggatccatatattttgcacgtgctgcaacagtacaagactccggt
ttgtacaaattacaacttgtagtattcgattctggtgagcctatgaattcagccgagtct
aatctttcattgagcattattgtaaacaatgatactgcatcaatcaacaaaggttttgaa
catcacacgggcatcatgctacagcacaatctcctaattgttattgtgttaacggttatt
acggtatcagtggctgttatcgtcataaccactatttgtgtcattcgacgaaatgacatt
cgaaatgcgacgacgaatacacaagtttcgaataacagcgaccattcccagactttatca
aaacagtttactttcaattcggatccctctttgagggtaccaaagggcaatggtcgacga
aatcggtgtggatataactattctacggtgccagaggatcttggtcttggatgtaacact
tcagctatttcagaaaactctaatcactcaacgggagtcaataaagcacaggttactttc
cagaatgttgtcgctgcaacaaatagatctgtacatgactgtatgagtgatatatcaact
ggttcatcaaacaatgacagtggccgaggatggagtgatgcagatgctggaactgtgcaa
gaactgcagagtatggctgaaaacgtcaccccatcatcacagtgtgcaataccattatta
aactgtcgtcaaaaaagtaatacagttcctgtttcattcacatctcgagaaaatggtttc
aaaccgaaccaaaggagttccttcaaaccgaattcttcatcgcaaaattcccccatgaat
aatttaagatctaaccatcactctctgtcaatgtatcccaaaatacaacaacaagaaagc
acttaccaaaaaagtccttactctacctcacagcaagtccagcctcctcatacgccatac
tcacttgttgccattcctatcagaacaattccaaacaaactgcattactcattagtacaa
ccgcaattaatgccaaaacaacaagtggtaagttgtggcgctaatttatctcaagctgag
acttcattttgtgaaaaccaaagttcttcatcaactgatagctgtcatttgttagatgat
ataaaaaaacattcatatagtgatcgcagcaatttcatactaaaggatgtcattgtatga
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