Octopus bimaculoides (California two-spot octopus): 106879631
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Entry
106879631 CDS
T04127
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03020
RNA polymerase
obi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106879631
09124 Replication and repair
03420 Nucleotide excision repair
106879631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obi03021
]
106879631
03400 DNA repair and recombination proteins [BR:
obi03400
]
106879631
Transcription machinery [BR:
obi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106879631
DNA repair and recombination proteins [BR:
obi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106879631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
106879631
NCBI-ProteinID:
XP_014784778
UniProt:
A0A0L8G249
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Position
17:complement(5163645..5185077)
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AA seq
274 aa
AA seq
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MPYANRPVVSISQLTDENIKFVLEDTDLSSANALRRVCIAEVPTMAIDWVQMEANSSVLF
DEFISHRIGLIPLTSDEVVDKMVYSRDCACEDFCSECAVEFTLDVKCLDDQTRHVTTADL
ISKNPKVVPVTSRHREEASEYEETDDILIVKLRKGQELKLRAFARKGFAKEHAKWNPTCG
VAFEYDPDNALRHTLLPKPEEWPRSEYSELEPDDPPQAPFDPSGKPNKFYYNVESCASLR
PENIVFSAIAVLKKKLSDLQTQLSQEMQGDALRI
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccttacgccaatcgacctgttgtaagcatctcacagcttactgatgagaatatcaaa
ttcgttttggaggacacagacctcagctccgccaatgctcttagacgagtatgtatagca
gaagtacctaccatggccattgactgggtccagatggaagccaattcctcggtattattt
gatgagtttatatcccatcgtattggtctcattcctctcaccagtgacgaagtggtggac
aaaatggtttattctagagattgtgcatgtgaggacttctgtagtgaatgtgctgtagag
tttactctggatgttaaatgtcttgatgaccagacaaggcatgtgaccacagcagatctg
ataagtaagaaccccaaagttgtaccggtaacttccagacatcgtgaagaagcaagtgaa
tatgaagagacagatgatattcttattgtaaaacttcgtaaaggacaagaactgaagcta
cgagcttttgctcgtaaaggttttgccaaggagcatgccaaatggaatccaacttgtgga
gtcgcctttgaatatgatccagacaatgctttacgccatactctgcttcccaaacctgaa
gaatggcctcgaagtgaatacagtgagcttgaacctgatgatcccccccaagccccattt
gacccttctggaaaaccaaacaaattctactacaatgtggaatcatgtgcttcattgcgg
ccagaaaatattgttttttcagccattgcagtcctgaagaagaaattgagtgatttacag
acacaactcagtcaagaaatgcagggagatgccctgcgaatttga
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