Octopus bimaculoides (California two-spot octopus): 106880074
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Entry
106880074 CDS
T04127
Name
(RefSeq) ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obi03036
]
106880074
Enzymes [BR:
obi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106880074
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106880074
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106880074
NCBI-ProteinID:
XP_052822255
LinkDB
All DBs
Position
3:89912269..89944245
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AA seq
690 aa
AA seq
DB search
MKRKTRGRGRGLAFLDFNENDQVTKHSIPPPSSGQFNDECWDDDYSVNNNVTNGNCDNSS
PLSNATFYNNVAMNSHSDSVPKKFWRPDQQRKQPGCRGFRNLNAGRRRDSPSPSINNSEE
DWNSDAEQENKYHSRKEFKFSSGRDQGDSNQSRPGNGARYKSGNAGCNVRNASRFNVSSC
KGSDAFDKVPDHMTLGDAQGGEAPYIPPPPPEDESAIFQSIPTGINFAKYDDIPVEISGR
AAPNGLVDFEEAQFQQKIMENIYRAKFEKPTPIQKNAIPIIQAGRDLMACAQTGSGKTAA
FLLPVLTLLLQRGVKRCEQNLPQYPEILIVAPTRELAVQIFMDTRKFAYGTSIRSAVVYG
GTSVSSQIKNISFGVHVLVGTPGRLLDFIHKNTVNISQVKHFILDEADRMLDMGFEPDIR
RLVDDHGMPAKTQRQTLMFSATFPDKIQELAADFLNDYLFLTIGLVGGACSDVEQILLKV
SRQEKREKLCSFLDEFGSDKTLVFVEQKRNADFLASYLSQNDYKTTSIHGDRLQREREEA
LQDFKTGRIPVLIATSVAARGLDIPNVSQVVNYDLPSSVDEYVHRIGRTGRCGNTGRAIS
FYSSDSDSCLAKALTKILSDAQQNVPVWLEEEAKMVGLSNGTYSSGRFGGRDRRRIRSCA
PEMVNDGCGWQPISSGAPPRQAIEEEELWE
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggaaaacaaggggaagaggtcgaggacttgctttcttagacttcaatgaaaat
gaccaagttaccaaacattcaattccgcctccttcgtctggccaatttaatgatgagtgt
tgggatgatgactattctgtaaataacaatgtcaccaatggtaactgtgataacagcagc
cctttgtcaaatgctaccttttacaataatgtcgcaatgaatagtcactctgattcagta
ccaaaaaagttttggaggccagaccaacagagaaagcagcctggttgtagaggcttcaga
aacctgaatgctgggaggaggagagactcacctagtccatcaatcaataattcagaggaa
gattggaactctgatgctgaacaagaaaacaaataccatagtcgaaaagagttcaagttc
agttctggaagagaccaaggtgacagtaatcaaagtagaccaggtaatggtgctcgctac
aagtctgggaatgctggttgtaatgtaaggaatgcatctcgatttaatgtcagttcatgt
aaaggttcagatgcatttgataaagtgcctgaccatatgacattaggagatgctcaaggt
ggtgaagctccatacatcccacctccaccaccagaagatgagagtgcaatctttcagtcc
attccaacgggtatcaattttgctaagtatgatgatattccagtcgaaatttctgggcga
gctgctccaaacggtttggttgattttgaagaagcccaattccagcaaaagataatggaa
aacatttatcgtgccaaatttgagaaaccaactccgatccagaaaaatgccattccaatt
atacaagctggtcgtgatctaatggcctgtgcccagactggctccggtaaaacagctgct
ttcctattaccagtattaacattgttattacaaagaggtgtaaaaagatgtgaacaaaat
cttccacaataccctgaaattttgattgttgcccctactcgtgaacttgctgtgcagata
tttatggacactcgcaaatttgcctatgggacaagcatacgatctgctgttgtctatggt
ggtacatcagtttcaagccagataaaaaatatttcttttggagttcatgtgttagttgga
actccaggtcgtctacttgattttattcataaaaatacagtgaatatatctcaagtgaaa
catttcatactggatgaagcagatagaatgttagatatgggatttgagccagatataagg
aggttagtggatgatcatggaatgccagcaaaaacccaaagacagacattgatgttcagt
gctacatttccagacaaaattcaagaattagctgctgattttcttaacgattatttgttt
ctcactattggcttggtgggtggtgcatgttctgatgtggaacagattctcttaaaagta
tcaaggcaggaaaaaagagagaaattgtgcagttttttagatgaatttggttcagataaa
accctagtctttgtggaacaaaagaggaatgcagactttttagcttcctacctctcacaa
aatgattacaaaacaacaagtattcatggagaccgtcttcaacgagaaagagaagaagcc
ttacaagatttcaagacaggtagaataccagtgttaattgcaacttcagtggcagctcga
ggacttgatattcctaatgtcagccaagttgtaaactatgaccttcccagctctgttgat
gaatatgtccaccgcattggcagaactggtcggtgtggtaatacaggtcgtgccatcagc
ttttattcctctgattcagactcgtgtctggcaaaagcattgacaaagatattgagtgat
gctcaacaaaatgtccctgtttggttagaagaagaagcaaaaatggtaggcctttcaaat
ggcacatacagtagtggacgctttggtggccgggatcgaagaagaattaggagctgtgca
ccagaaatggttaatgatggttgtggttggcaacctataagcagtggagcacccccaaga
caagcaattgaagaggaagagctgtgggaataa
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