KEGG   Octopus bimaculoides (California two-spot octopus): 106880297
Entry
106880297         CDS       T04127                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106880297
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:obi03041]
    106880297
   04121 Ubiquitin system [BR:obi04121]
    106880297
Spliceosome [BR:obi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    106880297
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    106880297
Ubiquitin system [BR:obi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106880297
SSDB
Motif
Pfam: SART-1 HIND DUF4862
Other DBs
NCBI-GeneID: 106880297
NCBI-ProteinID: XP_014785654
UniProt: A0A0L8FZ76
LinkDB
Position
27:complement(17400222..17405759)
AA seq 779 aa
MGSSSKKHKSDREHRHKHRRRSSSRSRNKEHQSKKRRDKDESKKSSHKHDISSSERKETP
FNSGSSGGAASTAGNNNNNNTSGSNSNTCSLSIEEANRLRIKLGMRPLDVSGSGSGAASA
GGEDIGTTETVAKKSEDVHVPAVNLGEMKRTNKIREKTELLREKRKIYDKFSKIKTLGDG
ADDDDVKKWIEKSRKLEHDREMAEKTAKMLDQMDEDFGIGSLMEEEFNKDKKKKNYSSRD
LKGFKVEHNLDSFKEGSTVILTLKDNQVLTEDQDVLVNPRLHEDEVAIKNNEIKKKKPEY
TPYDDEEFTDDFQPQKEAMLSKYDEEIYGKKITSFELGSGGKYVPSAERDLERIRKELKQ
QSQNLVQLSTLAREYYTNEEVESAKFNKVKKVKRKIRKKILKPDDLLNMPDEVGDARNGN
DLGNRKMKIKTENPTEDGKESVSPRIEVEDMDIDQQQPEETTILGHDDSDIYNSYVVDED
DAMNELYSTLDKVRKLKQRRERTVPDEIAKTLHHTQSLGSNAFDSEMKKSDIILNATSEF
CRALGDIPTYGLAGNRDEERDAFLDLELELMERKKKIQDEEDLSSQWNEVDIDTKPVNIV
KEENAVLDEEPAINMGLAAALQVAQKKGYLENQSKRMPSGPKHSGLEAIHYSIEDKRYDD
LDEKYRKRDRYTGMLVDFKEKEGYKPDVRLEYADDSGRLLNEKEAFRQLSHRFHGKGPGK
KKTEKRMKKLEEEQLMKQMSSTDTPLNTLTLLQEKQKQERTPYVILSGNKGMSANTIVK
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgggttcctcgtcgaagaaacacaaatctgaccgagaacaccgacataaacacaggcgg
agatcttcgtcacggtcacgaaacaaggagcatcaaagcaagaagcggcgggacaaagat
gaaagtaagaaatcttctcataaacatgatattagtagttcagagaggaaggaaacaccg
ttcaacagtggttcctccgggggcgctgcttctaccgctggtaataacaataataataat
accagtggtagcaacagtaatacctgttctttgagtatcgaagaggcgaataggttaagg
ataaagcttgggatgaggcccttagatgttagtggttccggttctggggccgccagtgct
ggtggagaagacattggaactactgagacagtcgcgaagaaatctgaagatgtccatgtg
cctgcggtgaatttgggtgaaatgaaacgaacgaataagatccgggagaaaaccgaactt
ctgcgagagaagaggaaaatttatgacaagtttagcaagatcaaaacgttgggagacgga
gcggatgacgacgatgtgaagaaatggattgagaaaagtcgaaagctggaacacgatcgc
gaaatggcagagaaaacggcgaaaatgttggatcagatggacgaagactttggaattggt
agtttaatggaagaagaatttaataaagataagaagaagaagaattattcgtctagagat
ctaaaaggtttcaaagttgaacataatttggacagtttcaaagaaggtagtaccgttatt
ttgactcttaaagacaaccaagttttaactgaagaccaagatgttcttgttaatcccagg
ttacatgaagatgaagttgctataaaaaataacgagattaaaaagaagaaacctgaatat
accccatatgatgatgaagaatttactgatgatttccaaccccaaaaagaagccatgttg
agtaaatatgatgaggaaatttatggtaagaaaattacatcttttgaacttggatctggt
ggtaaatatgttccatctgctgaacgagatcttgaaagaattcgtaaggaattaaaacaa
cagagtcaaaaccttgtacagttgtcaactctagccagggaatattacactaatgaggaa
gtggaatcagctaaatttaacaaagttaaaaaggtgaagagaaaaatccgcaagaaaata
ttaaaaccagatgatttattgaacatgcctgatgaggtcggtgatgccaggaatggtaat
gaccttggaaatcggaaaatgaaaataaaaactgagaatcctacagaagatggtaaagag
tcggtttctcctagaatagaggtggaagatatggacatagatcaacagcagccagaagaa
acgaccattctggggcacgacgacagcgacatctacaacagttatgtcgtagatgaagat
gatgcaatgaatgaactttactccactttagataaagtgcggaagttgaaacaaaggaga
gaacggacagttcctgacgaaatcgccaaaacattgcaccacacccagtcgctgggttcc
aatgcatttgatagtgagatgaaaaaaagtgacattattttaaatgctacgtcagaattt
tgtcgtgctttaggtgacattccaacttatggtttagctggcaatcgtgatgaagaacgc
gatgcctttttggatttagaattggaattgatggaacgtaagaaaaaaatccaagatgaa
gaggatctgtcgagtcagtggaacgaggttgatattgatactaaacctgttaatattgtg
aaagaggaaaatgcagtcttggatgaagaaccagctataaatatgggacttgcagcagct
ttacaagtagcacagaaaaagggttacctggagaatcagagcaaacgaatgcccagtggt
cccaaacacagcggtctcgaagctattcattattctattgaggacaaacgatatgatgac
cttgacgaaaagtaccgcaagagagatcggtacacggggatgttggtagacttcaaagag
aaagaaggatacaagccagacgttcggttagaatatgccgacgattctggacgattgtta
aatgaaaaagaagcgtttcgtcagctctctcaccgtttccatggcaaggggccaggcaag
aaaaagactgagaaacgcatgaagaaattagaagaagaacaattgatgaaacagatgagt
tccacagacactcctcttaatacattgactcttctacaagaaaaacaaaagcaagaaaga
actccttatgtcattctcagtggtaacaaaggaatgtctgctaataccattgttaaatag

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