Octopus bimaculoides (California two-spot octopus): 106880308
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Entry
106880308 CDS
T04127
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obi03041
]
106880308
Spliceosome [BR:
obi03041
]
Common components
Common spliceosomal components
General mRNP proteins
106880308
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_5
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
106880308
NCBI-ProteinID:
XP_014785670
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All DBs
Position
30:2547543..2562812
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AA seq
602 aa
AA seq
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MAAWFDPNLLLLFSLSFSPYFSSNHFRKYNHPNKLASSSEKISQSRQYADYNKYNKSPDR
RSRREKSDRKRSRSREKKSNRDKERRRSHTPSPPSRSRERYAGSAKRSRSRSPYKGRGAR
GEKPYRRSMSKSPLRSYEFVSVIDFQSSIRISYLIWKLGLVRDVRLITDNKTRRSKGIAY
VEFVDVECVNKALALTGQRLLGVPIMVQPSQAEKNRAANATATLQKGTSGPMRLYVGSLH
FNITEEMLRGIFEPFGKIDDIKLIKDHESGRLQGYGFITFHDAEDAKKALEQLNGFELAG
RPMKVGHVTERTAENQVASILDSDDMDRAGIDLGATRRLQLMAKLAEGTGFQIPQYVANA
LNMNSSGDTATPPPTPAPNLSTQSPTPMLQASAAAAAAAALVNLTSTAPVGVTSGAASGS
IAGGGGGGSGGIGGVGAVGTVGSVGSVGGGSSSGTGSGTTTSQPTQAANGPPIPTQCFML
ANMFDPSSESKVNWDQEIRDDVIEECNKHGGVVHIYVDKASVLGNVYVKCPNIAAAVASV
NALHGRYFAGKLITAAYVPLPNYHALFPEAVRANQLLLPSTQALQYSYGTALYPGMPPNI
SR
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttggtttgacccaaaccttctattattgttctctctctctttctctccctat
ttttccagcaaccatttcagaaaatataaccatccaaacaaacttgcaagcagttccgaa
aagatttctcagtcaagacagtatgcggattacaacaaatacaataaaagccctgatcgc
cgcagccgccgcgaaaagtctgaccgtaaacgtagccgcagccgagagaaaaagagcaac
cgtgacaaagaacgcaggcgaagtcatactccgagccctccaagtaggagccgggaaagg
tatgcaggtagtgccaagcgaagtagaagtcgctcaccgtacaagggtcgaggtgcacgt
ggagagaaaccgtaccggcgtagcatgagcaagagtccgctgcggtcttatgaatttgtc
agtgtcattgatttccagtcttctataaggatttcttatcttatatggaagttaggattg
gttcgtgatgtacgacttatcactgataacaaaacaagacgatcgaaaggcattgcttat
gtggaatttgtcgatgtggagtgtgtgaataaggcattggccttgactggtcagcgactg
ttgggtgttcccataatggtacagccatcacaagctgaaaagaacagagcagccaatgca
acagccacactacagaagggcacctcaggacccatgcgcctctacgttggttcattacac
ttcaacatcacagaagagatgttacgaggaatatttgagccatttggcaagattgatgac
atcaaattaatcaaggatcatgagtctggcagactacagggctatggattcatcacattc
catgatgctgaagatgcaaagaaagcccttgaacaactgaatggctttgaactggctggt
agacctatgaaggttggtcatgtaactgagcgaaccgctgaaaatcaggtggcctctata
ctggacagtgatgacatggatagggctggaattgatcttggtgctacacgcagacttcag
cttatggccaagttggctgaaggtactggcttccagatcccacaatatgtggccaatgcc
ctcaacatgaactcatccggagacactgctacaccaccaccaactccagctcccaatcta
tctacccagtcaccaacgcccatgctacaagccagtgctgctgcagctgctgctgctgct
cttgtcaatctaaccagtacagcaccagttggtgttacttctggtgctgccagtggaagt
attgctggtggtggaggtggtggcagtggaggcattggtggtgtcggtgctgttggcact
gttggcagtgttggtagcgttggtggcggtagcagcagtggtacaggtagcggtactacc
accagtcagcccacacaggctgctaatggaccaccgatccccacacagtgtttcatgttg
gctaacatgtttgacccttcttcggaatccaaggtgaactgggatcaagagatccgagat
gatgtcattgaggagtgcaacaaacacggcggtgtagtgcacatctatgtggacaaagct
tctgtactgggtaatgtctatgtaaagtgtcccaatattgcagcagcagtcgcatctgtc
aatgcgctgcatggcagatattttgcaggcaagctgataactgctgcgtatgtgccactg
cccaactatcatgctttgtttccagaggcagtccgtgcaaaccaactcctattgccctcc
actcaggctctccagtacagttacgggacggcactctaccctggaatgcctcccaatatt
tcacggtga
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