Octopus bimaculoides (California two-spot octopus): 106880663
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Entry
106880663 CDS
T04127
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obi03041
]
106880663
03016 Transfer RNA biogenesis [BR:
obi03016
]
106880663
Enzymes [BR:
obi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106880663
Spliceosome [BR:
obi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106880663
Transfer RNA biogenesis [BR:
obi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
106880663
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
Cas3-like_C_2
CMS1
PFK
Motif
Other DBs
NCBI-GeneID:
106880663
NCBI-ProteinID:
XP_014786198
UniProt:
A0A0L8FWT9
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All DBs
Position
1:complement(21448207..21450828)
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AA seq
731 aa
AA seq
DB search
MTAFEEMGVMPELGKAVEEMDWMLPTDVQAEAIPMILGGGDVLMAAETGSGKTGAFCLPI
IQIVQESLKDQAEGKGKGKTIVKSADVSKNWKMNVFDRSDAMAIDPEGHLCQARDPSGWH
GVRSNKAVLGKSGRYFYEATVTDEGLCRVGWSTNKATLDLGTDKNGFGFGGTGKKSHNRQ
FDSYGESFGINDVIGCYLDLEKGLIKWSKNGIDLGKAYDIPGQIRNEKFFAALVLKNAEM
DINFGENAFKYPPDKSWTSLFKAPKDAIFVSKIESGGNTHKPAPNAPQAIIIEPSRELAE
QTFSQICKFKKHLAEPNIRELLIIGGVSSKEQCDKLEQGIDIVVGTPGRMDDLISTGKLA
LHQVRFFVLDEADGLLSQGYGDLINRLHQQIPKVTNDGNRLQMVVCSATLHSFDVKKMAE
RIMYFPTWIDLKGQDSVPETVHHVVCEIDPTVDTQWKTLKHHVQTDGVHYKDNHSNLFSP
EMMSEAVKILKGEYTINAIDEHNIDHGLIFCRTKLDCDNMEKYLMERGRGKYSCVCLHSD
RKPPERKANLQKFKDRKVRFLICTDVAARGIDVTGLPFVINVTLPDEKQNYIHRIGRVGR
AERMGLAVSLVAVKKEKVWYHSNCSTRGKGCYNTNLTDRGGCCIWYDEPKLLNDIQEHLD
ITIDKVQPDMKIPIFEFDGKVTYGQKRKNTGSMYRGHVAQLAPTVSELAILEKRAQTSFI
DLKYNRKFASR
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgactgctttcgaagagatgggagtaatgcctgaactaggcaaggctgttgaagagatg
gactggatgttaccgacagacgtgcaagccgaagccatcccaatgattcttggaggagga
gatgtgctgatggcggccgagactggaagcggcaagactggagccttctgtttacccatc
atacagattgtccaagagtctttgaaagatcaagctgaaggtaaaggtaaaggcaaaact
atagtaaaaagtgctgatgtatcaaaaaattggaaaatgaacgtcttcgaccggagcgat
gccatggctattgaccccgagggtcatttatgtcaggctagagacccctctggctggcac
ggggttcgctccaacaaagctgttttgggcaagagtggacgttatttttatgaagccact
gtaacagacgagggcctttgtcgtgtgggttggtcgacaaacaaagctacccttgatctt
ggtactgataaaaatggatttgggtttggtggcaccggcaagaaatctcataacagacag
tttgattcatatggggaatcttttggtattaacgatgttattgggtgttacttagatctg
gagaaaggactgattaaatggtcgaaaaatgggattgatcttggtaaagcttatgatatt
ccaggtcaaataagaaatgagaaattctttgcagctcttgttttgaaaaatgcagaaatg
gatataaattttggtgaaaatgcttttaaatatccaccagataaaagttggacctctttg
tttaaagcaccgaaagatgctatttttgtttccaagatagagtctggtggaaatacccac
aaacctgcacctaatgcaccccaagctatcattattgagccttcaagggaattagctgaa
caaactttttcccaaatttgtaagttcaaaaaacatttagcagagcctaacatccgagaa
cttttaattattggaggtgttagttcaaaagaacaatgtgataagttggagcaaggaatt
gatattgtcgtaggaacgccaggtcgtatggacgacttgatttcaactgggaagctagct
ttacatcaagtgcgtttctttgtgcttgatgaagctgatggtctgctctctcaaggctat
ggagatttaatcaaccgtctgcatcaacagattccaaaagtaactaatgatggaaatcgt
ttacaaatggtcgtctgttctgctactttgcattcatttgatgtgaagaaaatggccgag
agaatcatgtatttccccacctggattgatttaaagggtcaagattctgtccctgagact
gtgcaccatgttgtgtgtgagattgatccaactgttgatactcagtggaaaactctgaaa
caccatgttcaaactgatggtgttcattataaagataatcacagcaatctattttctcct
gagatgatgtctgaagctgtgaaaatcctcaaaggagaatacactataaatgccattgat
gagcataatatagatcatggactgattttctgccgaacaaagttggattgtgataacatg
gagaaatacttaatggaacggggaagaggtaaatattcctgtgtttgtcttcacagtgat
cgaaaacctcctgagcgtaaggctaatctacaaaaatttaaagacaggaaggttcgattt
ctcatttgtactgatgtagctgctcgaggtattgatgtaactggtctaccttttgtcatc
aatgttactctacctgatgaaaaacagaactacattcaccgtattggtcgtgttggtcgt
gctgaaaggatgggtttggccgtttcactggttgcagtgaaaaaggagaaagtctggtac
cattccaactgttcaactcgtggtaaaggatgctataacaccaatttgactgacagaggt
ggctgttgtatttggtatgatgaacctaaactgttgaatgatattcaagaacatttggac
atcacaattgataaagtgcaacctgacatgaaaattccaatctttgaatttgatggtaaa
gtcacttatggacagaagcgcaaaaatacagggtcaatgtacagaggtcatgttgctcag
ttggctccaacagtttctgaattggcaatattggagaaacgagcacaaacctcttttatt
gacttgaaatataacaggaaatttgcaagtcgatga
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