Octopus bimaculoides (California two-spot octopus): 106880809
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Entry
106880809 CDS
T04127
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106880809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obi03041
]
106880809
Spliceosome [BR:
obi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
106880809
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
106880809
NCBI-ProteinID:
XP_014786420
UniProt:
A0A0L8FVV6
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Position
7:complement(30470329..30499212)
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AA seq
512 aa
AA seq
DB search
MADQVNGKRLLEKTSTENISPKKSKKENKSYVAEAESDRSRSCPYLDTINRSVLDFDFEK
LCSVSLSHINVYACLVCGKYFQGRGTKSHAYTHSVQDGHRVYLNLRTQKFYCLPDNYEII
DSSLEDIIYVLNPTFNNFHIKKLDSNPKLSRAYDGTTYLPGIVGLNNIKANDYCNVILQA
LSHVPPLRNYFLQEESYKSIRRPAGDQMFLLVQRFGELLRKLWNPQNFKAHVSPHEMLQA
VVLCSKKKFQITEQGDAVYFMSWFLNALHVALGGNKKLSSSIINKTFRGKMTVYSRKVPP
LDLKEEEKEKLLQMEEYQETAEDTQFLYLTCDLPAPPLYPDDLRENIIPQVPLANILAKF
NGITEKEYKTYKDSTMKRFKIFKLPPYIILYVKRFTKNYFVSEKNPTIVNFPIKNIDFGD
LLTPEIRVKHPYTTYDLIANIVHEGESGSDKGTYRVHILHKGTGKWFELQDLHVADILPQ
MITLSESYIQIYEIRRDIPNPLYKKDPDMETS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcaagtcaatggtaaacgtcttcttgagaaaacttccactgagaatatctcg
cctaaaaaatctaaaaaagaaaataaatcttacgtagcagaagctgaaagtgaccgtagt
cgatcttgcccttaccttgataccataaacagatctgtactcgacttcgattttgaaaaa
ctttgttcggtttcattatcacatatcaatgtttatgcctgcttggtttgtggcaaatac
ttccaaggccgtggtacgaaatctcatgcatatacccacagtgtgcaagatggacatcga
gtttatcttaatttaagaacacagaaattttactgtttacctgacaactatgaaattata
gattcctcacttgaagatattatttatgttttaaatccaactttcaacaattttcatatt
aaaaagttagattccaaccctaaattatctcgtgcttatgatggaactacctacctacca
ggtattgttggtttaaacaatataaaagccaatgactactgcaatgtcatccttcaggct
ctttctcatgtgccccctctgcggaattactttctgcaagaggaaagttataaaagtatt
cgacgtccagccggtgatcaaatgtttcttcttgtccaaagattcggagaacttctacgc
aaattgtggaatccacaaaatttcaaagctcatgttagtccccatgaaatgcttcaagct
gttgtcctctgcagcaagaaaaaatttcaaatcactgagcaaggtgatgctgtatatttt
atgtcttggttcctcaatgctttacacgttgccttgggaggaaacaaaaaactttccagt
agcatcatcaacaaaacttttcgtggcaaaatgacagtttattctcgcaaagttccgcca
ctggatttgaaagaagaagaaaaagagaagctactccagatggaagagtaccaagaaacg
gcagaagatactcagtttctgtatctgacttgtgacctgcctgcacctccactctatcct
gacgacttacgtgaaaatatcattccgcaggttcctttggctaacattcttgccaaattc
aatggcatcacagaaaaagaatataaaacctataaagactctacaatgaagagattcaaa
attttcaagttgccaccttatattatcctctatgtcaagcgattcactaaaaattatttt
gtctctgagaaaaatccaaccattgtaaactttcctatcaaaaatattgactttggagat
ttgctgacgcctgaaatacgggtgaaacatccctacaccacatatgatctcatcgcaaac
attgttcatgaaggggaatctggatctgataaaggaacatatcgggtacacatcttacat
aagggaactgggaaatggtttgagcttcaagatttacatgttgctgatattctacctcaa
atgattactctctctgaaagttatattcagatttatgaaattcgaagagatatccctaat
cctttgtataaaaaagatcctgacatggagacaagttag
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