Octopus bimaculoides (California two-spot octopus): 106880814
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Entry
106880814 CDS
T04127
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obi03000
]
106880814
03036 Chromosome and associated proteins [BR:
obi03036
]
106880814
Transcription factors [BR:
obi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
106880814
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
106880814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_WDHD1
HMG_box_2
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
106880814
NCBI-ProteinID:
XP_014786426
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Position
6:complement(13414002..13439455)
Genome browser
AA seq
727 aa
AA seq
DB search
MSVNDLNPGKLKLQRENVVFKNLKTGKVDQYSSSDIESVCWLKRACGNCLKIILQSGIIH
RYDGIRETEYDKLSSFVMKHYDTTLEKIDCSVRGWNWGVTRFRGNALNFEVEKNMAFEIP
LTNVSHATTNKNEVTLEFHQNDDAAVSLMELRFHIPSELEKDVVQEFYKNVMSKADIIQA
TGDAIVTFDQVQCLTPRGRYDIKIYPTFLQLHGKTFDYKIPYATVLRLFLLPHNDRRQMF
FVVSLDPPIKQGQTRYHFLILLFNKDDEMTTELALSEEEIQKKYEGKLTREMSGTEYEVI
SKIFKAVVNRKITVPGVFVSQKGDQAIGCSYKAATGLLYPLERGLIFVHKPPIHIRFDEV
SSVNFARSAGSTRSFDFDVETKSSNTYTFVGIEKDEYGKLYDFIRSKKLRVKNFGSKEKG
SYRDDMVDSNDESEEQHDAYLERMKQEGRERDEDESEDESDESFNPGESGSEVAEEYDSN
PETTSDSESGEDGEPKKPKPKKHKEKKASKPKESKSSKSRKKKKVVDPNRPKRPLSAYFI
WLSENREKIKADNPGISITDLTKKAADVWRNLTDKSKWEKLQEESKEKYNQLMEEYKKTA
SERADNDENSSPAKTPKKSSARKSDANVSRATGDYKSKEFISSSESSSNEDKPKKKKMKK
EKPEKATKAKKTDKKEEKEEKDDDDEEVGELPSDEEILSSPEASESGSAGSEEEEEEEEE
EDDEEEE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaatgatctgaatcctggaaaattaaaacttcaaagagaaaatgtggtgttc
aagaacttaaagactggtaaagtcgatcaatattcaagcagtgatattgagtctgtctgt
tggctgaaacgtgcctgcggtaattgcctcaagatcatacttcaaagtggaataatacac
cgctatgatggaatacgagaaacagaatacgacaaattgtcatcatttgttatgaaacat
tatgataccaccttggagaaaatagattgttctgttagaggctggaactggggtgtgacc
cgttttagaggtaatgccctcaattttgaagttgagaaaaacatggccttcgaaattcct
ttgaccaatgtctcacatgcaacaacaaacaaaaatgaagtcactttggaatttcaccag
aatgatgatgctgctgtctcgctgatggaactgcgctttcacatcccatctgaactggaa
aaggatgttgtgcaagaattctacaaaaatgtcatgtccaaagcagacattatccaggcc
acaggagatgctattgttacattcgatcaagtacaatgtcttacacccagaggtcgatat
gatatcaagatctaccctacatttctccaactccatggtaaaacatttgattacaaaatt
ccttacgccactgtacttcggcttttcttacttccacacaatgacagacgccagatgttt
tttgtggtcagcttggatccacctataaagcaaggtcagacgcgttatcacttccttatt
ttactttttaacaaagacgacgagatgaccacagaactagccttatcagaagaagaaata
cagaagaaatatgaaggaaaattaactcgtgagatgtctggtacagagtatgaagtcatt
agcaaaattttcaaagctgttgttaaccgtaaaattactgttccaggtgtttttgtcagc
caaaaaggagaccaggcgattggttgttcttacaaagcagctacaggtttattatatcca
ttggaaagaggactaatctttgttcacaaacctcccattcacattcgatttgatgaagtc
tcttctgttaactttgcccgaagtgctggcagcactaggtcctttgattttgatgtagaa
accaagtccagtaatacttacacgtttgttggtattgaaaaagatgaatatgggaagctg
tatgattttatccgtagcaagaaattaagagtcaaaaattttggttccaaagagaaaggt
tcatatcgcgacgacatggttgatagcaatgatgagagtgaagaacaacatgatgcctac
ttagaaagaatgaaacaggaaggaagagaaagagatgaagatgaatcagaagacgaatca
gatgaatctttcaatcctggagaaagtggcagtgaagttgcagaagaatatgatagcaac
cctgagaccacatcagattcggaaagtggtgaagatggagagccaaagaaaccaaaacct
aagaaacacaaagaaaagaaagcctccaaacctaaagaatccaaatccagcaaatcccgg
aagaaaaagaaggtcgttgaccctaatcgtccaaaacgtccattatcagcctacttcatt
tggttaagtgaaaatagagaaaagattaaagctgataaccctggcatttccattacagat
cttaccaagaaggctgctgacgtttggagaaacctcactgacaaatctaaatgggaaaaa
cttcaagaagaatctaaagaaaaatataatcaacttatggaagaatataaaaagacagct
tctgaaagagctgataatgatgagaattcatctccagcaaagacacctaaaaagagctct
gctcgaaaatccgacgccaatgtcagtcgagctaccggcgactataagagcaaagagttc
atctccagctctgaatccagttcaaacgaggacaaaccaaagaaaaagaaaatgaagaaa
gagaagcctgaaaaggcaacaaaggccaagaaaactgacaagaaagaagagaaggaggag
aaagacgatgacgacgaggaagtgggcgagttaccatctgatgaagaaatcctcagttct
ccggaagcttctgagtcaggatcggccggttcggaagaagaagaagaagaggaggaggag
gaagatgatgaagaagaagaataa
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